Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:50:47 (224121): wrapper (7.7.26015): starting
04:50:47 (224121): wrapper: running run_atlas (--nthreads 8)
[2026-04-17 04:50:47] Arguments: --nthreads 8
[2026-04-17 04:50:47] Threads: 8
[2026-04-17 04:50:47] Checking for CVMFS
[2026-04-17 04:50:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-17 04:50:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-17 04:50:47] Running cvmfs_config stat atlas.cern.ch
[2026-04-17 04:50:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-17 04:50:48] 2.13.3.0 7405 163779 279760 158558 1 924 24558930 40960001 31769 16776704 0 766631897 99.681 709335730 34574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-17 04:50:48] CVMFS is ok
[2026-04-17 04:50:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-17 04:50:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-17 04:50:48] Further information can be found at the LHC@home message board.
[2026-04-17 04:50:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-17 04:50:48] Checking for apptainer binary...
[2026-04-17 04:50:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-17 04:50:48] Running /usr/bin/apptainer --version
[2026-04-17 04:50:48] apptainer version 1.4.5-2.el9
[2026-04-17 04:50:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-17 04:50:48] c-212-3.aglt2.org
[2026-04-17 04:50:48] apptainer works
[2026-04-17 04:50:48] Set ATHENA_PROC_NUMBER=8
[2026-04-17 04:50:48] Set ATHENA_CORE_NUMBER=8
[2026-04-17 04:50:48] Starting ATLAS job with PandaID=7083286152
[2026-04-17 04:50:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-17 06:40:40]  *** The last 200 lines of the pilot log: ***
[2026-04-17 06:40:40] 2026-04-17 10:40:06,116 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-17 06:40:40] 2026-04-17 10:40:06,198 | INFO     | job 7083286152 has state=finished
[2026-04-17 06:40:40] 2026-04-17 10:40:06,198 | INFO     | preparing for final server update for job 7083286152 in state='finished'
[2026-04-17 06:40:40] 2026-04-17 10:40:06,199 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7083286152/jobReport.json
[2026-04-17 06:40:40] 2026-04-17 10:40:06,202 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-17 06:40:40] 2026-04-17 10:40:06,202 | INFO     | this job has now completed (state=finished)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,202 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,202 | INFO     | log transfer has been attempted: DONE
[2026-04-17 06:40:40] 2026-04-17 10:40:06,202 | INFO     | job 7083286152 has finished - writing final server update
[2026-04-17 06:40:40] 2026-04-17 10:40:06,203 | INFO     | total number of processed events: 400 (read)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,220 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7083286152/memory_monitor_summary.json (trf name=prmon)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,221 | INFO     | extracted standard info from prmon json
[2026-04-17 06:40:40] 2026-04-17 10:40:06,221 | INFO     | extracted standard memory fields from prmon json
[2026-04-17 06:40:40] 2026-04-17 10:40:06,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-17 06:40:40] 2026-04-17 10:40:06,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-17 06:40:40] 2026-04-17 10:40:06,223 | INFO     | fitting pss+swap vs Time
[2026-04-17 06:40:40] 2026-04-17 10:40:06,224 | INFO     | sum of square deviations: 379832238.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,224 | INFO     | sum of deviations: 4185244281.999998
[2026-04-17 06:40:40] 2026-04-17 10:40:06,225 | INFO     | mean x (centered): 0.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,225 | INFO     | mean y: 2520197.0934579438
[2026-04-17 06:40:40] 2026-04-17 10:40:06,225 | INFO     | intersect: 2520197.0934579438
[2026-04-17 06:40:40] 2026-04-17 10:40:06,225 | INFO     | chi2: 1.2894385713562846
[2026-04-17 06:40:40] 2026-04-17 10:40:06,225 | INFO     | sum of square deviations: 329031285.5
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | sum of deviations: 3988717776.0000024
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | mean x (centered): 0.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | mean y: 2519616.3333333335
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | intersect: 2519616.3333333335
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | chi2: 1.291106148418692
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | current chi2=1.291106148418692 (change=-0.1293258243898717 %)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,226 | INFO     | right removable region: 101
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | sum of square deviations: 329031285.5
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | sum of deviations: -8903712805.000002
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | mean x (centered): 0.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | mean y: 2558430.098039216
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | intersect: 2558430.098039216
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | chi2: 0.042466497823825465
[2026-04-17 06:40:40] 2026-04-17 10:40:06,227 | INFO     | current chi2=0.042466497823825465 (change=96.70659007980835 %)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | sum of square deviations: 282974608.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | sum of deviations: -7322941542.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | mean x (centered): 0.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | mean y: 2553167.81443299
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | intersect: 2553167.81443299
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | chi2: 0.041775250695596504
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | current chi2=0.041775250695596504 (change=1.6277469620797007 %)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | left removable region: 10
[2026-04-17 06:40:40] 2026-04-17 10:40:06,228 | INFO     | sum of square deviations: 233641590.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | sum of deviations: -6921720691.000001
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | mean x (centered): 0.0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | mean y: 2554675.956043956
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | intersect: 2554675.956043956
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | chi2: 0.03880090630057296
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | current memory leak: -29.63 B/s (using 91 data points, chi2=0.04)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,229 | INFO     | could have reported an average CPU frequency of 3082 MHz (7 samples)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | ..............................
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . Timing measurements:
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . get job = 0 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . initial setup = 8 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . payload setup = 13 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . stage-in = 0 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . payload execution = 6506 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . stage-out = 0 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | . log creation = 0 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,230 | INFO     | ..............................
[2026-04-17 06:40:40] 2026-04-17 10:40:06,315 | INFO     | 
[2026-04-17 06:40:40] 2026-04-17 10:40:06,315 | INFO     | job summary report
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | --------------------------------------------------
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | PanDA job id: 7083286152
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | task id: 49263191
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | errors: (none)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | pilot state: finished 
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | transexitcode: 0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | exeerrorcode: 0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | exeerrordiag: 
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | exitcode: 0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | exitmsg: OK
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | cpuconsumptiontime: 33426 s
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | nevents: 400
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | neventsw: 0
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | pid: 242998
[2026-04-17 06:40:40] 2026-04-17 10:40:06,316 | INFO     | pgrp: 242998
[2026-04-17 06:40:40] 2026-04-17 10:40:06,317 | INFO     | corecount: 8
[2026-04-17 06:40:40] 2026-04-17 10:40:06,317 | INFO     | event service: False
[2026-04-17 06:40:40] 2026-04-17 10:40:06,317 | INFO     | sizes: {0: 2281491, 11: 2281491, 6523: 2308675, 6524: 2317673, 6526: 2317729, 6527: 2317923}
[2026-04-17 06:40:40] 2026-04-17 10:40:06,317 | INFO     | --------------------------------------------------
[2026-04-17 06:40:40] 2026-04-17 10:40:06,317 | INFO     | 
[2026-04-17 06:40:40] 2026-04-17 10:40:06,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-17 06:40:40] 2026-04-17 10:40:06,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,376 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,376 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,376 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-17 06:40:40] 2026-04-17 10:40:06,377 | INFO     | job 7083286152 has completed (purged errors)
[2026-04-17 06:40:40] 2026-04-17 10:40:06,378 | INFO     | overall cleanup function is called
[2026-04-17 06:40:40] 2026-04-17 10:40:07,386 | INFO     | --- collectZombieJob: --- 10, [242998]
[2026-04-17 06:40:40] 2026-04-17 10:40:07,386 | INFO     | zombie collector waiting for pid 242998
[2026-04-17 06:40:40] 2026-04-17 10:40:07,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-17 06:40:40] 2026-04-17 10:40:07,396 | INFO     | collected zombie processes
[2026-04-17 06:40:40] 2026-04-17 10:40:07,400 | INFO     | will attempt to kill all subprocesses of pid=242998
[2026-04-17 06:40:40] 2026-04-17 10:40:07,410 | INFO     | PID=229999 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-17 06:40:40] 2026-04-17 10:40:07,410 | INFO     | .. there are 25 such processes running
[2026-04-17 06:40:40] 2026-04-17 10:40:07,827 | INFO     | process IDs to be killed: [242998] (in reverse order)
[2026-04-17 06:40:40] 2026-04-17 10:40:07,939 | WARNING  | found no corresponding commands to process id(s)
[2026-04-17 06:40:40] 2026-04-17 10:40:07,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-17 06:40:40] 2026-04-17 10:40:07,958 | INFO     | did not find any defunct processes belonging to 242998
[2026-04-17 06:40:40] 2026-04-17 10:40:07,975 | INFO     | did not find any defunct processes belonging to 242998
[2026-04-17 06:40:40] 2026-04-17 10:40:07,976 | INFO     | Ready for new job
[2026-04-17 06:40:40] 2026-04-17 10:40:07,977 | INFO     | **************************************
[2026-04-17 06:40:40] 2026-04-17 10:40:07,977 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-17 06:40:40] 2026-04-17 10:40:07,977 | INFO     | **************************************
[2026-04-17 06:40:40] 2026-04-17 10:40:07,977 | INFO     | 
[2026-04-17 06:40:40] 2026-04-17 10:40:07,981 | INFO     | architecture information:
[2026-04-17 06:40:40] 2026-04-17 10:40:07,982 | INFO     | executing command: cat /etc/os-release
[2026-04-17 06:40:40] 2026-04-17 10:40:07,996 | INFO     | cat /etc/os-release:
[2026-04-17 06:40:40] NAME="CentOS Linux"
[2026-04-17 06:40:40] VERSION="7 (Core)"
[2026-04-17 06:40:40] ID="centos"
[2026-04-17 06:40:40] ID_LIKE="rhel fedora"
[2026-04-17 06:40:40] VERSION_ID="7"
[2026-04-17 06:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-17 06:40:40] ANSI_COLOR="0;31"
[2026-04-17 06:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-17 06:40:40] HOME_URL="https://www.centos.org/"
[2026-04-17 06:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-17 06:40:40] 
[2026-04-17 06:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-17 06:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-17 06:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-17 06:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-17 06:40:40] 
[2026-04-17 06:40:40] 2026-04-17 10:40:07,996 | INFO     | **************************************
[2026-04-17 06:40:40] 2026-04-17 10:40:08,500 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-17 06:40:40] 2026-04-17 10:40:08,534 | INFO     | sufficient remaining disk space (129781202944 B)
[2026-04-17 06:40:40] 2026-04-17 10:40:08,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-17 06:40:40] 2026-04-17 10:40:08,535 | INFO     | current server update state: UPDATING_FINAL
[2026-04-17 06:40:40] 2026-04-17 10:40:08,535 | INFO     | update_server=False
[2026-04-17 06:40:40] 2026-04-17 10:40:08,535 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-17 06:40:40] 2026-04-17 10:40:08,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-17 06:40:40] 2026-04-17 10:40:08,809 | INFO     | all job control threads have been joined
[2026-04-17 06:40:40] 2026-04-17 10:40:09,012 | INFO     | all payload control threads have been joined
[2026-04-17 06:40:40] 2026-04-17 10:40:09,117 | INFO     | all data control threads have been joined
[2026-04-17 06:40:40] 2026-04-17 10:40:09,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-17 06:40:40] 2026-04-17 10:40:09,183 | INFO     | aborting loop
[2026-04-17 06:40:40] 2026-04-17 10:40:09,540 | INFO     | [job] retrieve thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:09,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-17 06:40:40] 2026-04-17 10:40:09,690 | INFO     | [payload] validate_pre thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:09,815 | INFO     | [job] control thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:09,835 | INFO     | [job] create_data_payload thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:09,835 | INFO     | [data] copytool_in thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,017 | INFO     | [payload] control thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,091 | INFO     | [payload] execute_payloads thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,102 | INFO     | [job] validate thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,122 | INFO     | [data] control thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,187 | INFO     | [job] job monitor thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,495 | INFO     | [payload] failed_post thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:10,555 | INFO     | [payload] validate_post thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:11,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-17 06:40:40] 2026-04-17 10:40:11,675 | INFO     | [data] copytool_out thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:12,334 | INFO     | [job] queue monitor thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:12,548 | INFO     | [data] queue_monitor thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:18,972 | INFO     | job.realtimelogging is not enabled
[2026-04-17 06:40:40] 2026-04-17 10:40:18,974 | INFO     | [monitor] cgroup control has ended
[2026-04-17 06:40:40] 2026-04-17 10:40:19,984 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-17 06:40:40] 2026-04-17 10:40:19,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712221050688)>', '<ExcThread(monitor, started 139711946704640)>']
[2026-04-17 06:40:40] 2026-04-17 10:40:25,011 | INFO     | all workflow threads have been joined
[2026-04-17 06:40:40] 2026-04-17 10:40:25,012 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-17 06:40:40] 2026-04-17 10:40:25,012 | INFO     | traces error code: 0
[2026-04-17 06:40:40] 2026-04-17 10:40:25,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-17 06:40:40] 2026-04-17 10:40:40,023 | INFO     | PID=229999 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-17 06:40:40] 2026-04-17 10:40:40,024 | INFO     | .. there are 25 such processes running
[2026-04-17 06:40:40] 2026-04-17 10:40:40,024 | INFO     | found 0 job(s) in 20 queues
[2026-04-17 06:40:40] 2026-04-17 10:40:40,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-17 06:40:40] 2026-04-17 10:40:40,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-17 06:40:40] 2026-04-17 10:40:40,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-17 06:40:40] 2026-04-17 10:40:40,024 | INFO     | [monitor] control thread has ended
[2026-04-17 06:40:40] 2026-04-17 10:40:40,163 [wrapper] ==== pilot stdout END ====
[2026-04-17 06:40:40] 2026-04-17 10:40:40,169 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-17 06:40:40] 2026-04-17 10:40:40,172 [wrapper] pilotpid: 229999
[2026-04-17 06:40:40] 2026-04-17 10:40:40,176 [wrapper] Pilot exit status: 0
[2026-04-17 06:40:40] 2026-04-17 10:40:40,188 [wrapper] pandaids: 7083286152
[2026-04-17 06:40:40] 2026-04-17 10:40:40,274 [wrapper] cleanup supervisor_pilot  735061 230000
[2026-04-17 06:40:40] 2026-04-17 10:40:40,277 [wrapper] Test setup, not cleaning
[2026-04-17 06:40:40] 2026-04-17 10:40:40,281 [wrapper] apfmon messages muted
[2026-04-17 06:40:40] 2026-04-17 10:40:40,284 [wrapper] ==== wrapper stdout END ====
[2026-04-17 06:40:40] 2026-04-17 10:40:40,288 [wrapper] ==== wrapper stderr END ====
[2026-04-17 06:40:40]  *** Error codes and diagnostics ***
[2026-04-17 06:40:40]     "exeErrorCode": 0,
[2026-04-17 06:40:40]     "pilotErrorCode": 0,
[2026-04-17 06:40:40]  *** Listing of results directory ***
[2026-04-17 06:40:40] total 418768
[2026-04-17 06:40:40] -rwx------. 1 boincer umatlas     36322 Apr  9 18:42 runpilot2-wrapper.sh
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas      5094 Apr  9 20:06 queuedata.json
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas    644190 Apr  9 20:06 pilot3.tar.gz
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas       100 Apr 17 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-17 06:40:40] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 04:50 run_atlas
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas       105 Apr 17 04:50 job.xml
[2026-04-17 06:40:40] -rw-r--r--. 2 boincer umatlas 224363781 Apr 17 04:50 EVNT.49263189._000517.pool.root.1
[2026-04-17 06:40:40] -rw-r--r--. 2 boincer umatlas     15665 Apr 17 04:50 start_atlas.sh
[2026-04-17 06:40:40] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 04:50 shared
[2026-04-17 06:40:40] -rw-r--r--. 2 boincer umatlas    656935 Apr 17 04:50 input.tar.gz
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas         0 Apr 17 04:50 boinc_lockfile
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas      2577 Apr 17 04:50 pandaJob.out
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas        57 Apr 17 04:50 setup.sh.local
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas    997051 Apr 17 04:51 agis_schedconf.cvmfs.json
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas   1511633 Apr 17 04:51 agis_ddmendpoints.agis.ALL.json
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas       429 Apr 17 04:51 workernode_map.json
[2026-04-17 06:40:40] drwx------. 5 boincer umatlas      4096 Apr 17 04:51 pilot3
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas      6872 Apr 17 06:36 init_data.xml
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas 198522361 Apr 17 06:39 HITS.49263191._033809.pool.root.1
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas       487 Apr 17 06:39 boinc_task_state.xml
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas      1035 Apr 17 06:39 memory_monitor_summary.json
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas        95 Apr 17 06:40 pilot_heartbeat.json
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas    324354 Apr 17 06:40 log.49263191._033809.job.log.tgz.1
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas      6351 Apr 17 06:40 heartbeat_new.json
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas      6242 Apr 17 06:40 heartbeat.json
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas      8192 Apr 17 06:40 boinc_mmap_file
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas        27 Apr 17 06:40 wrapper_checkpoint.txt
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas       822 Apr 17 06:40 pilotlog.txt
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas    611076 Apr 17 06:40 log.49263191._033809.job.log.1
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas       357 Apr 17 06:40 output.list
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas       410 Apr 17 06:40 runtime_log
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas    952320 Apr 17 06:40 result.tar.gz
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas      8958 Apr 17 06:40 runtime_log.err
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas       651 Apr 17 06:40 2b6e5a3696a3.diag
[2026-04-17 06:40:40] -rw-r--r--. 1 boincer umatlas     21245 Apr 17 06:40 stderr.txt
[2026-04-17 06:40:40] HITS file was successfully produced:
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas 198522361 Apr 17 06:39 shared/HITS.pool.root.1
[2026-04-17 06:40:40]  *** Contents of shared directory: ***
[2026-04-17 06:40:40] total 414576
[2026-04-17 06:40:40] -rw-r--r--. 2 boincer umatlas 224363781 Apr 17 04:50 ATLAS.root_0
[2026-04-17 06:40:40] -rw-r--r--. 2 boincer umatlas     15665 Apr 17 04:50 start_atlas.sh
[2026-04-17 06:40:40] -rw-r--r--. 2 boincer umatlas    656935 Apr 17 04:50 input.tar.gz
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas 198522361 Apr 17 06:39 HITS.pool.root.1
[2026-04-17 06:40:40] -rw-------. 1 boincer umatlas    952320 Apr 17 06:40 result.tar.gz
06:40:42 (224121): run_atlas exited; CPU time 33672.150633
06:40:42 (224121): called boinc_finish(0)

</stderr_txt>
]]>

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