Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
21:09:54 (248385): wrapper (7.7.26015): starting
21:09:54 (248385): wrapper: running run_atlas (--nthreads 4)
[2026-04-16 21:09:54] Arguments: --nthreads 4
[2026-04-16 21:09:54] Threads: 4
[2026-04-16 21:09:54] Checking for CVMFS
[2026-04-16 21:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-16 21:09:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-16 21:09:56] Running cvmfs_config stat atlas.cern.ch
[2026-04-16 21:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-16 21:09:58] 2.13.3.0 207616 173 47160 158547 3 50 4056675 4096000 916 130560 0 109255 99.984 5661 987 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-16 21:09:58] CVMFS is ok
[2026-04-16 21:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-16 21:09:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-16 21:09:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-16 21:09:58] Further information can be found at the LHC@home message board.
[2026-04-16 21:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-16 21:09:58] Checking for apptainer binary...
[2026-04-16 21:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-16 21:09:58] Running /usr/bin/apptainer --version
[2026-04-16 21:09:58] apptainer version 1.4.5
[2026-04-16 21:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-16 21:09:58] SETI64-Ubuntu
[2026-04-16 21:09:58] apptainer works
[2026-04-16 21:09:58] Set ATHENA_PROC_NUMBER=4
[2026-04-16 21:09:58] Set ATHENA_CORE_NUMBER=4
[2026-04-16 21:09:58] Starting ATLAS job with PandaID=7083285051
[2026-04-16 21:09:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-16 23:46:07]  *** The last 200 lines of the pilot log: ***
[2026-04-16 23:46:07] 2026-04-17 03:45:33,363 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/26/PanDA_Pilot-7083285051/jobReport.json
[2026-04-16 23:46:07] 2026-04-17 03:45:33,365 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/26/workernode_map.json
[2026-04-16 23:46:07] 2026-04-17 03:45:33,366 | INFO     | this job has now completed (state=finished)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,366 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,366 | INFO     | log transfer has been attempted: DONE
[2026-04-16 23:46:07] 2026-04-17 03:45:33,366 | INFO     | job 7083285051 has finished - writing final server update
[2026-04-16 23:46:07] 2026-04-17 03:45:33,366 | INFO     | total number of processed events: 400 (read)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,386 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/26/PanDA_Pilot-7083285051/memory_monitor_summary.json (trf name=prmon)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,387 | INFO     | extracted standard info from prmon json
[2026-04-16 23:46:07] 2026-04-17 03:45:33,387 | INFO     | extracted standard memory fields from prmon json
[2026-04-16 23:46:07] 2026-04-17 03:45:33,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-16 23:46:07] 2026-04-17 03:45:33,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-16 23:46:07] 2026-04-17 03:45:33,390 | INFO     | fitting pss+swap vs Time
[2026-04-16 23:46:07] 2026-04-17 03:45:33,390 | INFO     | sum of square deviations: 1088905998.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,391 | INFO     | sum of deviations: 20725818903.000004
[2026-04-16 23:46:07] 2026-04-17 03:45:33,391 | INFO     | mean x (centered): 0.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,391 | INFO     | mean y: 2327234.013157895
[2026-04-16 23:46:07] 2026-04-17 03:45:33,391 | INFO     | intersect: 2327234.013157895
[2026-04-16 23:46:07] 2026-04-17 03:45:33,391 | INFO     | chi2: 1.2996332609267773
[2026-04-16 23:46:07] 2026-04-17 03:45:33,391 | INFO     | sum of square deviations: 984941258.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,392 | INFO     | sum of deviations: 19874521508.000008
[2026-04-16 23:46:07] 2026-04-17 03:45:33,392 | INFO     | mean x (centered): 0.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,392 | INFO     | mean y: 2325984.870748299
[2026-04-16 23:46:07] 2026-04-17 03:45:33,392 | INFO     | intersect: 2325984.870748299
[2026-04-16 23:46:07] 2026-04-17 03:45:33,393 | INFO     | chi2: 1.300849916793159
[2026-04-16 23:46:07] 2026-04-17 03:45:33,393 | INFO     | current chi2=1.300849916793159 (change=-0.09361532233440605 %)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,393 | INFO     | right removable region: 146
[2026-04-16 23:46:07] 2026-04-17 03:45:33,393 | INFO     | sum of square deviations: 984941258.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,393 | INFO     | sum of deviations: 5032359212.000001
[2026-04-16 23:46:07] 2026-04-17 03:45:33,394 | INFO     | mean x (centered): 0.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,394 | INFO     | mean y: 2349698.68707483
[2026-04-16 23:46:07] 2026-04-17 03:45:33,394 | INFO     | intersect: 2349698.68707483
[2026-04-16 23:46:07] 2026-04-17 03:45:33,394 | INFO     | chi2: 0.027516820494776717
[2026-04-16 23:46:07] 2026-04-17 03:45:33,394 | INFO     | current chi2=0.027516820494776717 (change=97.88272420212189 %)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,394 | INFO     | sum of square deviations: 887813855.5
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | sum of deviations: 5502660000.999999
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | mean x (centered): 0.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | mean y: 2349034.5492957747
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | intersect: 2349034.5492957747
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | chi2: 0.0020284272356085936
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | current chi2=0.0020284272356085936 (change=92.6284098266599 %)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,395 | INFO     | sum of square deviations: 797291228.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,396 | INFO     | sum of deviations: 4773444529.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,396 | INFO     | mean x (centered): 0.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,396 | INFO     | mean y: 2350259.5401459853
[2026-04-16 23:46:07] 2026-04-17 03:45:33,396 | INFO     | intersect: 2350259.5401459853
[2026-04-16 23:46:07] 2026-04-17 03:45:33,396 | INFO     | chi2: 0.0019267912285382733
[2026-04-16 23:46:07] 2026-04-17 03:45:33,397 | INFO     | current chi2=0.0019267912285382733 (change=5.010581858009127 %)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,397 | INFO     | left removable region: 15
[2026-04-16 23:46:07] 2026-04-17 03:45:33,397 | INFO     | sum of square deviations: 697054930.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,397 | INFO     | sum of deviations: 4430125731.999999
[2026-04-16 23:46:07] 2026-04-17 03:45:33,397 | INFO     | mean x (centered): 0.0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,397 | INFO     | mean y: 2349632.381679389
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | intersect: 2349632.381679389
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | chi2: 0.0017909269088183374
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | current memory leak: 6.36 B/s (using 131 data points, chi2=0.00)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | could have reported an average CPU frequency of 2805 MHz (9 samples)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | ..............................
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | . Timing measurements:
[2026-04-16 23:46:07] 2026-04-17 03:45:33,398 | INFO     | . get job = 0 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | . initial setup = 9 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | . payload setup = 16 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | . stage-in = 0 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | . payload execution = 9271 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | . stage-out = 0 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | . log creation = 0 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,399 | INFO     | ..............................
[2026-04-16 23:46:07] 2026-04-17 03:45:33,969 | INFO     | 
[2026-04-16 23:46:07] 2026-04-17 03:45:33,969 | INFO     | job summary report
[2026-04-16 23:46:07] 2026-04-17 03:45:33,969 | INFO     | --------------------------------------------------
[2026-04-16 23:46:07] 2026-04-17 03:45:33,969 | INFO     | PanDA job id: 7083285051
[2026-04-16 23:46:07] 2026-04-17 03:45:33,969 | INFO     | task id: 49263200
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | errors: (none)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | pilot state: finished 
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | transexitcode: 0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | exeerrorcode: 0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | exeerrordiag: 
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | exitcode: 0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | exitmsg: OK
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | cpuconsumptiontime: 36057 s
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | nevents: 400
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | neventsw: 0
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | pid: 257926
[2026-04-16 23:46:07] 2026-04-17 03:45:33,970 | INFO     | pgrp: 257926
[2026-04-16 23:46:07] 2026-04-17 03:45:33,971 | INFO     | corecount: 4
[2026-04-16 23:46:07] 2026-04-17 03:45:33,971 | INFO     | event service: False
[2026-04-16 23:46:07] 2026-04-17 03:45:33,971 | INFO     | sizes: {0: 2279918, 1: 2281576, 11: 2281576, 9292: 2309901, 9293: 2318929, 9296: 2318985, 9298: 2319371}
[2026-04-16 23:46:07] 2026-04-17 03:45:33,971 | INFO     | --------------------------------------------------
[2026-04-16 23:46:07] 2026-04-17 03:45:33,971 | INFO     | 
[2026-04-16 23:46:07] 2026-04-17 03:45:33,971 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/26
[2026-04-16 23:46:07] 2026-04-17 03:45:33,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | job 7083285051 has completed (purged errors)
[2026-04-16 23:46:07] 2026-04-17 03:45:33,996 | INFO     | overall cleanup function is called
[2026-04-16 23:46:07] 2026-04-17 03:45:35,004 | INFO     | --- collectZombieJob: --- 10, [257926]
[2026-04-16 23:46:07] 2026-04-17 03:45:35,004 | INFO     | zombie collector waiting for pid 257926
[2026-04-16 23:46:07] 2026-04-17 03:45:35,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-16 23:46:07] 2026-04-17 03:45:35,004 | INFO     | collected zombie processes
[2026-04-16 23:46:07] 2026-04-17 03:45:35,004 | INFO     | will attempt to kill all subprocesses of pid=257926
[2026-04-16 23:46:07] 2026-04-17 03:45:35,472 | INFO     | process IDs to be killed: [257926] (in reverse order)
[2026-04-16 23:46:07] 2026-04-17 03:45:35,604 | WARNING  | found no corresponding commands to process id(s)
[2026-04-16 23:46:07] 2026-04-17 03:45:35,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-16 23:46:07] 2026-04-17 03:45:35,617 | INFO     | did not find any defunct processes belonging to 257926
[2026-04-16 23:46:07] 2026-04-17 03:45:35,629 | INFO     | did not find any defunct processes belonging to 257926
[2026-04-16 23:46:07] 2026-04-17 03:45:35,630 | INFO     | Ready for new job
[2026-04-16 23:46:07] 2026-04-17 03:45:35,631 | INFO     | **************************************
[2026-04-16 23:46:07] 2026-04-17 03:45:35,631 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-16 23:46:07] 2026-04-17 03:45:35,631 | INFO     | **************************************
[2026-04-16 23:46:07] 2026-04-17 03:45:35,632 | INFO     | 
[2026-04-16 23:46:07] 2026-04-17 03:45:35,638 | INFO     | architecture information:
[2026-04-16 23:46:07] 2026-04-17 03:45:35,639 | INFO     | executing command: cat /etc/os-release
[2026-04-16 23:46:07] 2026-04-17 03:45:35,655 | INFO     | cat /etc/os-release:
[2026-04-16 23:46:07] NAME="CentOS Linux"
[2026-04-16 23:46:07] VERSION="7 (Core)"
[2026-04-16 23:46:07] ID="centos"
[2026-04-16 23:46:07] ID_LIKE="rhel fedora"
[2026-04-16 23:46:07] VERSION_ID="7"
[2026-04-16 23:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-16 23:46:07] ANSI_COLOR="0;31"
[2026-04-16 23:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-16 23:46:07] HOME_URL="https://www.centos.org/"
[2026-04-16 23:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-16 23:46:07] 
[2026-04-16 23:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-16 23:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-16 23:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-16 23:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-16 23:46:07] 
[2026-04-16 23:46:07] 2026-04-17 03:45:35,655 | INFO     | **************************************
[2026-04-16 23:46:07] 2026-04-17 03:45:36,158 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/26
[2026-04-16 23:46:07] 2026-04-17 03:45:36,177 | INFO     | sufficient remaining disk space (346778763264 B)
[2026-04-16 23:46:07] 2026-04-17 03:45:36,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-16 23:46:07] 2026-04-17 03:45:36,177 | INFO     | current server update state: UPDATING_FINAL
[2026-04-16 23:46:07] 2026-04-17 03:45:36,177 | INFO     | update_server=False
[2026-04-16 23:46:07] 2026-04-17 03:45:36,177 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-16 23:46:07] 2026-04-17 03:45:36,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-16 23:46:07] 2026-04-17 03:45:36,898 | INFO     | all payload control threads have been joined
[2026-04-16 23:46:07] 2026-04-17 03:45:36,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-16 23:46:07] 2026-04-17 03:45:36,958 | INFO     | aborting loop
[2026-04-16 23:46:07] 2026-04-17 03:45:37,133 | INFO     | all data control threads have been joined
[2026-04-16 23:46:07] 2026-04-17 03:45:37,182 | INFO     | [job] retrieve thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:37,496 | INFO     | [payload] execute_payloads thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:37,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-16 23:46:07] 2026-04-17 03:45:37,804 | INFO     | all job control threads have been joined
[2026-04-16 23:46:07] 2026-04-17 03:45:37,903 | INFO     | [payload] control thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:37,963 | INFO     | [job] job monitor thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:37,968 | INFO     | [job] validate thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,138 | INFO     | [data] control thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,188 | INFO     | [payload] validate_post thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,257 | INFO     | [job] create_data_payload thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,422 | INFO     | [payload] validate_pre thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,429 | INFO     | [data] copytool_out thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-16 23:46:07] 2026-04-17 03:45:38,679 | INFO     | [data] copytool_in thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,743 | INFO     | [payload] failed_post thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:38,809 | INFO     | [job] control thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:39,173 | INFO     | [monitor] cgroup control has ended
[2026-04-16 23:46:07] 2026-04-17 03:45:39,498 | INFO     | [job] queue monitor thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:41,684 | INFO     | [data] queue_monitor thread has finished
[2026-04-16 23:46:07] 2026-04-17 03:45:41,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128262769420096)>', '<ExcThread(monitor, started 128262252508928)>']
[2026-04-16 23:46:07] 2026-04-17 03:45:46,755 | INFO     | all workflow threads have been joined
[2026-04-16 23:46:07] 2026-04-17 03:45:46,756 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-16 23:46:07] 2026-04-17 03:45:46,756 | INFO     | traces error code: 0
[2026-04-16 23:46:07] 2026-04-17 03:45:46,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-16 23:46:07] 2026-04-17 03:46:06,739 | INFO     | PID=252951 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-16 23:46:07] 2026-04-17 03:46:06,741 | INFO     | found 0 job(s) in 20 queues
[2026-04-16 23:46:07] 2026-04-17 03:46:06,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-16 23:46:07] 2026-04-17 03:46:06,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-16 23:46:07] 2026-04-17 03:46:06,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-16 23:46:07] 2026-04-17 03:46:06,742 | INFO     | [monitor] control thread has ended
[2026-04-16 23:46:07] 2026-04-17 03:46:06,895 [wrapper] ==== pilot stdout END ====
[2026-04-16 23:46:07] 2026-04-17 03:46:06,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-16 23:46:07] 2026-04-17 03:46:06,905 [wrapper] pilotpid: 252951
[2026-04-16 23:46:07] 2026-04-17 03:46:06,912 [wrapper] Pilot exit status: 0
[2026-04-16 23:46:07] 2026-04-17 03:46:06,926 [wrapper] pandaids: 7083285051
[2026-04-16 23:46:07] 2026-04-17 03:46:07,011 [wrapper] cleanup supervisor_pilot  269840 252952
[2026-04-16 23:46:07] 2026-04-17 03:46:07,015 [wrapper] Test setup, not cleaning
[2026-04-16 23:46:07] 2026-04-17 03:46:07,019 [wrapper] apfmon messages muted
[2026-04-16 23:46:07] 2026-04-17 03:46:07,024 [wrapper] ==== wrapper stdout END ====
[2026-04-16 23:46:07] 2026-04-17 03:46:07,030 [wrapper] ==== wrapper stderr END ====
[2026-04-16 23:46:07]  *** Error codes and diagnostics ***
[2026-04-16 23:46:07]     "exeErrorCode": 0,
[2026-04-16 23:46:07]     "pilotErrorCode": 0,
[2026-04-16 23:46:07]  *** Listing of results directory ***
[2026-04-16 23:46:07] total 414240
[2026-04-16 23:46:07] -rwx------ 1 whitlerd whitlerd     36322 Apr  9 18:40 runpilot2-wrapper.sh
[2026-04-16 23:46:07] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr  9 18:44 queuedata.json
[2026-04-16 23:46:07] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr  9 20:06 pilot3.tar.gz
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 16 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-16 23:46:07] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 16 21:09 run_atlas
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 16 21:09 job.xml
[2026-04-16 23:46:07] -rw-r--r-- 2 whitlerd whitlerd 223058672 Apr 16 21:09 EVNT.49263198._000231.pool.root.1
[2026-04-16 23:46:07] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 16 21:09 start_atlas.sh
[2026-04-16 23:46:07] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 16 21:09 shared
[2026-04-16 23:46:07] -rw-r--r-- 2 whitlerd whitlerd    656936 Apr 16 21:09 input.tar.gz
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 16 21:09 boinc_setup_complete
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd      9461 Apr 16 21:09 init_data.xml
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 16 21:09 boinc_lockfile
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd      2572 Apr 16 21:09 pandaJob.out
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd    997829 Apr 16 21:10 agis_schedconf.cvmfs.json
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd   1511633 Apr 16 21:10 agis_ddmendpoints.agis.ALL.json
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd       423 Apr 16 21:10 workernode_map.json
[2026-04-16 23:46:07] drwx------ 5 whitlerd whitlerd      4096 Apr 16 21:10 pilot3
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd 194777289 Apr 16 23:44 HITS.49263200._029311.pool.root.1
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd       487 Apr 16 23:45 boinc_task_state.xml
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd      1022 Apr 16 23:45 memory_monitor_summary.json
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd    275271 Apr 16 23:45 log.49263200._029311.job.log.tgz.1
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd      6297 Apr 16 23:45 heartbeat_new.json
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd      6188 Apr 16 23:45 heartbeat.json
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 16 23:46 boinc_mmap_file
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr 16 23:46 wrapper_checkpoint.txt
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd       746 Apr 16 23:46 pilotlog.txt
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd        95 Apr 16 23:46 pilot_heartbeat.json
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd    865985 Apr 16 23:46 log.49263200._029311.job.log.1
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd       357 Apr 16 23:46 output.list
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 16 23:46 runtime_log
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd   1157120 Apr 16 23:46 result.tar.gz
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd      8662 Apr 16 23:46 runtime_log.err
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd       651 Apr 16 23:46 2ae05bb80cf4.diag
[2026-04-16 23:46:07] -rw-rw-r-- 1 whitlerd whitlerd     21173 Apr 16 23:46 stderr.txt
[2026-04-16 23:46:07] HITS file was successfully produced:
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd 194777289 Apr 16 23:44 shared/HITS.pool.root.1
[2026-04-16 23:46:07]  *** Contents of shared directory: ***
[2026-04-16 23:46:07] total 409848
[2026-04-16 23:46:07] -rw-r--r-- 2 whitlerd whitlerd 223058672 Apr 16 21:09 ATLAS.root_0
[2026-04-16 23:46:07] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 16 21:09 start_atlas.sh
[2026-04-16 23:46:07] -rw-r--r-- 2 whitlerd whitlerd    656936 Apr 16 21:09 input.tar.gz
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd 194777289 Apr 16 23:44 HITS.pool.root.1
[2026-04-16 23:46:07] -rw------- 1 whitlerd whitlerd   1157120 Apr 16 23:46 result.tar.gz
23:46:08 (248385): run_atlas exited; CPU time 36478.227091
23:46:08 (248385): called boinc_finish(0)

</stderr_txt>
]]>

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