Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:14 (426641): wrapper (7.7.26015): starting
19:03:14 (426641): wrapper: running run_atlas (--nthreads 4)
[2026-04-16 19:03:14] Arguments: --nthreads 4
[2026-04-16 19:03:14] Threads: 4
[2026-04-16 19:03:14] Checking for CVMFS
[2026-04-16 19:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-16 19:03:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-16 19:03:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-16 19:03:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-16 19:03:17] 2.13.3.0 426854 0 25552 158545 3 1 15246681 102400000 0 130560 0 0 0.000 1282 1948 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-16 19:03:17] CVMFS is ok
[2026-04-16 19:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-16 19:03:17] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-16 19:03:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-16 19:03:17] Further information can be found at the LHC@home message board.
[2026-04-16 19:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-16 19:03:17] Checking for apptainer binary...
[2026-04-16 19:03:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-16 19:03:17] Running /usr/bin/apptainer --version
[2026-04-16 19:03:18] apptainer version 1.4.5
[2026-04-16 19:03:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-16 19:03:18] T7810-Ubuntu
[2026-04-16 19:03:18] apptainer works
[2026-04-16 19:03:18] Set ATHENA_PROC_NUMBER=4
[2026-04-16 19:03:18] Set ATHENA_CORE_NUMBER=4
[2026-04-16 19:03:18] Starting ATLAS job with PandaID=7083316583
[2026-04-16 19:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC_31420/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-16 21:50:03]  *** The last 200 lines of the pilot log: ***
[2026-04-16 21:50:03] 2026-04-17 01:48:55,400 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,400 | INFO     | mean y: 2346258.9197530863
[2026-04-16 21:50:03] 2026-04-17 01:48:55,400 | INFO     | intersect: 2346258.9197530863
[2026-04-16 21:50:03] 2026-04-17 01:48:55,401 | INFO     | chi2: 1.49582913024953
[2026-04-16 21:50:03] 2026-04-17 01:48:55,401 | INFO     | sum of square deviations: 1199940638.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,402 | INFO     | sum of deviations: -4615219069.000001
[2026-04-16 21:50:03] 2026-04-17 01:48:55,402 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,402 | INFO     | mean y: 2346852.7579617836
[2026-04-16 21:50:03] 2026-04-17 01:48:55,402 | INFO     | intersect: 2346852.7579617836
[2026-04-16 21:50:03] 2026-04-17 01:48:55,402 | INFO     | chi2: 1.495844737097593
[2026-04-16 21:50:03] 2026-04-17 01:48:55,402 | INFO     | current chi2=1.495844737097593 (change=-0.0010433576768495317 %)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,403 | INFO     | right removable region: 156
[2026-04-16 21:50:03] 2026-04-17 01:48:55,403 | INFO     | sum of square deviations: 1199940638.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,404 | INFO     | sum of deviations: -21721740892.999996
[2026-04-16 21:50:03] 2026-04-17 01:48:55,404 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,404 | INFO     | mean y: 2367217.974522293
[2026-04-16 21:50:03] 2026-04-17 01:48:55,404 | INFO     | intersect: 2367217.974522293
[2026-04-16 21:50:03] 2026-04-17 01:48:55,404 | INFO     | chi2: 0.1932401345956513
[2026-04-16 21:50:03] 2026-04-17 01:48:55,405 | INFO     | current chi2=0.1932401345956513 (change=87.0814031704667 %)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,405 | INFO     | sum of square deviations: 1088905998.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,406 | INFO     | sum of deviations: -12999501563.000004
[2026-04-16 21:50:03] 2026-04-17 01:48:55,406 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,406 | INFO     | mean y: 2355229.1315789474
[2026-04-16 21:50:03] 2026-04-17 01:48:55,406 | INFO     | intersect: 2355229.1315789474
[2026-04-16 21:50:03] 2026-04-17 01:48:55,406 | INFO     | chi2: 0.12091917735606353
[2026-04-16 21:50:03] 2026-04-17 01:48:55,406 | INFO     | current chi2=0.12091917735606353 (change=37.42543307109417 %)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,407 | INFO     | sum of square deviations: 984941258.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,407 | INFO     | sum of deviations: -3789545334.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,408 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,408 | INFO     | mean y: 2341712.387755102
[2026-04-16 21:50:03] 2026-04-17 01:48:55,408 | INFO     | intersect: 2341712.387755102
[2026-04-16 21:50:03] 2026-04-17 01:48:55,408 | INFO     | chi2: 0.004232074485576697
[2026-04-16 21:50:03] 2026-04-17 01:48:55,408 | INFO     | current chi2=0.004232074485576697 (change=96.50007998887162 %)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,408 | INFO     | sum of square deviations: 887813855.5
[2026-04-16 21:50:03] 2026-04-17 01:48:55,409 | INFO     | sum of deviations: -4137335827.4999986
[2026-04-16 21:50:03] 2026-04-17 01:48:55,409 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,409 | INFO     | mean y: 2342251.5140845072
[2026-04-16 21:50:03] 2026-04-17 01:48:55,410 | INFO     | intersect: 2342251.5140845072
[2026-04-16 21:50:03] 2026-04-17 01:48:55,410 | INFO     | chi2: 0.002975372046278962
[2026-04-16 21:50:03] 2026-04-17 01:48:55,410 | INFO     | current chi2=0.002975372046278962 (change=29.694714579828247 %)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,410 | INFO     | sum of square deviations: 797291228.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,411 | INFO     | sum of deviations: -4173853019.9999995
[2026-04-16 21:50:03] 2026-04-17 01:48:55,411 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,411 | INFO     | mean y: 2342311.3576642335
[2026-04-16 21:50:03] 2026-04-17 01:48:55,411 | INFO     | intersect: 2342311.3576642335
[2026-04-16 21:50:03] 2026-04-17 01:48:55,412 | INFO     | chi2: 0.002499428254368433
[2026-04-16 21:50:03] 2026-04-17 01:48:55,412 | INFO     | current chi2=0.002499428254368433 (change=15.996110217737314 %)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,412 | INFO     | left removable region: 25
[2026-04-16 21:50:03] 2026-04-17 01:48:55,412 | INFO     | sum of square deviations: 697054930.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,413 | INFO     | sum of deviations: -3804555360.0000005
[2026-04-16 21:50:03] 2026-04-17 01:48:55,413 | INFO     | mean x (centered): 0.0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,413 | INFO     | mean y: 2342986.1984732826
[2026-04-16 21:50:03] 2026-04-17 01:48:55,413 | INFO     | intersect: 2342986.1984732826
[2026-04-16 21:50:03] 2026-04-17 01:48:55,413 | INFO     | chi2: 0.0024482365380893356
[2026-04-16 21:50:03] 2026-04-17 01:48:55,413 | INFO     | current memory leak: -5.46 B/s (using 131 data points, chi2=0.00)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,414 | INFO     | could have reported an average CPU frequency of 2886 MHz (9 samples)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,414 | INFO     | ..............................
[2026-04-16 21:50:03] 2026-04-17 01:48:55,414 | INFO     | . Timing measurements:
[2026-04-16 21:50:03] 2026-04-17 01:48:55,414 | INFO     | . get job = 0 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | . initial setup = 7 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | . payload setup = 9 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | . stage-in = 0 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | . payload execution = 9884 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | . stage-out = 0 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | . log creation = 0 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,415 | INFO     | ..............................
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | 
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | job summary report
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | --------------------------------------------------
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | PanDA job id: 7083316583
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | task id: 49263200
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | errors: (none)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-16 21:50:03] 2026-04-17 01:48:55,499 | INFO     | pilot state: finished 
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | transexitcode: 0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | exeerrorcode: 0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | exeerrordiag: 
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | exitcode: 0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | exitmsg: OK
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | cpuconsumptiontime: 38632 s
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | nevents: 400
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | neventsw: 0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | pid: 436042
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | pgrp: 436042
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | corecount: 4
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | event service: False
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | sizes: {0: 2279708, 1: 2281537, 11: 2281537, 9897: 2310016, 9898: 2310015, 9899: 2319293, 9902: 2319495}
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | --------------------------------------------------
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | 
[2026-04-16 21:50:03] 2026-04-17 01:48:55,500 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC_31420/slots/0
[2026-04-16 21:50:03] 2026-04-17 01:48:55,537 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-16 21:50:03] 2026-04-17 01:48:55,539 | INFO     | job 7083316583 has completed (purged errors)
[2026-04-16 21:50:03] 2026-04-17 01:48:55,540 | INFO     | overall cleanup function is called
[2026-04-16 21:50:03] 2026-04-17 01:48:56,548 | INFO     | --- collectZombieJob: --- 10, [436042]
[2026-04-16 21:50:03] 2026-04-17 01:48:56,548 | INFO     | zombie collector waiting for pid 436042
[2026-04-16 21:50:03] 2026-04-17 01:48:56,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-16 21:50:03] 2026-04-17 01:48:56,548 | INFO     | collected zombie processes
[2026-04-16 21:50:03] 2026-04-17 01:48:56,548 | INFO     | will attempt to kill all subprocesses of pid=436042
[2026-04-16 21:50:03] 2026-04-17 01:48:56,888 | INFO     | process IDs to be killed: [436042] (in reverse order)
[2026-04-16 21:50:03] 2026-04-17 01:48:56,980 | WARNING  | found no corresponding commands to process id(s)
[2026-04-16 21:50:03] 2026-04-17 01:48:56,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-16 21:50:03] 2026-04-17 01:48:56,986 | INFO     | did not find any defunct processes belonging to 436042
[2026-04-16 21:50:03] 2026-04-17 01:48:56,991 | INFO     | did not find any defunct processes belonging to 436042
[2026-04-16 21:50:03] 2026-04-17 01:48:56,991 | INFO     | Ready for new job
[2026-04-16 21:50:03] 2026-04-17 01:48:56,992 | INFO     | **************************************
[2026-04-16 21:50:03] 2026-04-17 01:48:56,993 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-16 21:50:03] 2026-04-17 01:48:56,993 | INFO     | **************************************
[2026-04-16 21:50:03] 2026-04-17 01:48:56,993 | INFO     | 
[2026-04-16 21:50:03] 2026-04-17 01:48:56,995 | INFO     | architecture information:
[2026-04-16 21:50:03] 2026-04-17 01:48:56,995 | INFO     | executing command: cat /etc/os-release
[2026-04-16 21:50:03] 2026-04-17 01:48:57,006 | INFO     | cat /etc/os-release:
[2026-04-16 21:50:03] NAME="CentOS Linux"
[2026-04-16 21:50:03] VERSION="7 (Core)"
[2026-04-16 21:50:03] ID="centos"
[2026-04-16 21:50:03] ID_LIKE="rhel fedora"
[2026-04-16 21:50:03] VERSION_ID="7"
[2026-04-16 21:50:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-16 21:50:03] ANSI_COLOR="0;31"
[2026-04-16 21:50:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-16 21:50:03] HOME_URL="https://www.centos.org/"
[2026-04-16 21:50:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-16 21:50:03] 
[2026-04-16 21:50:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-16 21:50:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-16 21:50:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-16 21:50:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-16 21:50:03] 
[2026-04-16 21:50:03] 2026-04-17 01:48:57,006 | INFO     | **************************************
[2026-04-16 21:50:03] 2026-04-17 01:48:57,509 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC_31420/slots/0
[2026-04-16 21:50:03] 2026-04-17 01:48:57,528 | INFO     | sufficient remaining disk space (369161666560 B)
[2026-04-16 21:50:03] 2026-04-17 01:48:57,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-16 21:50:03] 2026-04-17 01:48:57,528 | INFO     | current server update state: UPDATING_FINAL
[2026-04-16 21:50:03] 2026-04-17 01:48:57,528 | INFO     | update_server=False
[2026-04-16 21:50:03] 2026-04-17 01:48:57,528 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-16 21:50:03] 2026-04-17 01:48:57,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-16 21:50:03] 2026-04-17 01:48:57,530 | INFO     | aborting loop
[2026-04-16 21:50:03] 2026-04-17 01:48:57,805 | INFO     | all data control threads have been joined
[2026-04-16 21:50:03] 2026-04-17 01:48:57,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-16 21:50:03] 2026-04-17 01:48:58,116 | INFO     | all job control threads have been joined
[2026-04-16 21:50:03] 2026-04-17 01:48:58,533 | INFO     | [job] retrieve thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:58,535 | INFO     | [job] job monitor thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:58,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-16 21:50:03] 2026-04-17 01:48:58,587 | INFO     | all payload control threads have been joined
[2026-04-16 21:50:03] 2026-04-17 01:48:58,763 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:58,810 | INFO     | [data] control thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:58,834 | INFO     | [job] validate thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:58,886 | INFO     | [payload] execute_payloads thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,122 | INFO     | [job] control thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,145 | INFO     | [job] create_data_payload thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,263 | INFO     | [payload] validate_pre thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,477 | INFO     | [data] copytool_in thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,478 | INFO     | [payload] failed_post thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,588 | INFO     | [payload] control thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,933 | INFO     | [payload] validate_post thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:48:59,992 | INFO     | [data] copytool_out thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:49:00,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-16 21:50:03] 2026-04-17 01:49:01,515 | INFO     | [job] queue monitor thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:49:02,559 | INFO     | [data] queue_monitor thread has finished
[2026-04-16 21:50:03] 2026-04-17 01:49:27,119 | INFO     | PID=431266 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-16 21:50:03] 2026-04-17 01:49:27,119 | INFO     | .. there are 2 such processes running
[2026-04-16 21:50:03] 2026-04-17 01:49:27,120 | INFO     | found 0 job(s) in 20 queues
[2026-04-16 21:50:03] 2026-04-17 01:49:27,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-16 21:50:03] 2026-04-17 01:49:27,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-16 21:50:03] 2026-04-17 01:49:56,432 | INFO     | [monitor] cgroup control has ended
[2026-04-16 21:50:03] 2026-04-17 01:49:58,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139359626385216)>', '<ExcThread(monitor, started 139358954821376)>']
[2026-04-16 21:50:03] 2026-04-17 01:49:58,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-16 21:50:03] 2026-04-17 01:49:58,249 | INFO     | [monitor] control thread has ended
[2026-04-16 21:50:03] 2026-04-17 01:50:03,195 | INFO     | all workflow threads have been joined
[2026-04-16 21:50:03] 2026-04-17 01:50:03,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-16 21:50:03] 2026-04-17 01:50:03,196 | INFO     | traces error code: 0
[2026-04-16 21:50:03] 2026-04-17 01:50:03,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-16 21:50:03] 2026-04-17 01:50:03,349 [wrapper] ==== pilot stdout END ====
[2026-04-16 21:50:03] 2026-04-17 01:50:03,351 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-16 21:50:03] 2026-04-17 01:50:03,353 [wrapper] pilotpid: 431266
[2026-04-16 21:50:03] 2026-04-17 01:50:03,355 [wrapper] Pilot exit status: 0
[2026-04-16 21:50:03] 2026-04-17 01:50:03,368 [wrapper] pandaids: 7083316583
[2026-04-16 21:50:03] 2026-04-17 01:50:03,436 [wrapper] cleanup supervisor_pilot  461326 431267
[2026-04-16 21:50:03] 2026-04-17 01:50:03,441 [wrapper] Test setup, not cleaning
[2026-04-16 21:50:03] 2026-04-17 01:50:03,444 [wrapper] apfmon messages muted
[2026-04-16 21:50:03] 2026-04-17 01:50:03,453 [wrapper] ==== wrapper stdout END ====
[2026-04-16 21:50:03] 2026-04-17 01:50:03,457 [wrapper] ==== wrapper stderr END ====
[2026-04-16 21:50:03]  *** Error codes and diagnostics ***
[2026-04-16 21:50:03]     "exeErrorCode": 0,
[2026-04-16 21:50:03]     "pilotErrorCode": 0,
[2026-04-16 21:50:03]  *** Listing of results directory ***
[2026-04-16 21:50:03] total 409112
[2026-04-16 21:50:03] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr  9 21:35 pilot3.tar.gz
[2026-04-16 21:50:03] -rwx------ 1 whitlerd whitlerd     36322 Apr  9 21:37 runpilot2-wrapper.sh
[2026-04-16 21:50:03] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr  9 21:39 queuedata.json
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 16 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-16 21:50:03] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 16 19:03 run_atlas
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 16 19:03 job.xml
[2026-04-16 21:50:03] -rw-r--r-- 2 whitlerd whitlerd 223995965 Apr 16 19:03 EVNT.49263198._000554.pool.root.1
[2026-04-16 21:50:03] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 16 19:03 start_atlas.sh
[2026-04-16 21:50:03] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 16 19:03 shared
[2026-04-16 21:50:03] -rw-r--r-- 2 whitlerd whitlerd    656937 Apr 16 19:03 input.tar.gz
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 16 19:03 boinc_setup_complete
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd      8948 Apr 16 19:03 init_data.xml
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 16 19:03 boinc_lockfile
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd      2575 Apr 16 19:03 pandaJob.out
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd    997813 Apr 16 19:03 agis_schedconf.cvmfs.json
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd   1511633 Apr 16 19:03 agis_ddmendpoints.agis.ALL.json
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd       427 Apr 16 19:03 workernode_map.json
[2026-04-16 21:50:03] drwx------ 5 whitlerd whitlerd      4096 Apr 16 19:03 pilot3
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd 188413254 Apr 16 21:48 HITS.49263200._031162.pool.root.1
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd       487 Apr 16 21:48 boinc_task_state.xml
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd      1034 Apr 16 21:48 memory_monitor_summary.json
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd    288415 Apr 16 21:48 log.49263200._031162.job.log.tgz.1
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd      6368 Apr 16 21:48 heartbeat_new.json
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd      6259 Apr 16 21:48 heartbeat.json
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd        95 Apr 16 21:49 pilot_heartbeat.json
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 16 21:49 boinc_mmap_file
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr 16 21:49 wrapper_checkpoint.txt
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd      4838 Apr 16 21:50 pilotlog.txt
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd    939089 Apr 16 21:50 log.49263200._031162.job.log.1
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd       357 Apr 16 21:50 output.list
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 16 21:50 runtime_log
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd   1249280 Apr 16 21:50 result.tar.gz
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd      8738 Apr 16 21:50 runtime_log.err
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd       656 Apr 16 21:50 5463f45a6d31.diag
[2026-04-16 21:50:03] -rw-rw-r-- 1 whitlerd whitlerd     20873 Apr 16 21:50 stderr.txt
[2026-04-16 21:50:03] HITS file was successfully produced:
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd 188413254 Apr 16 21:48 shared/HITS.pool.root.1
[2026-04-16 21:50:03]  *** Contents of shared directory: ***
[2026-04-16 21:50:03] total 404632
[2026-04-16 21:50:03] -rw-r--r-- 2 whitlerd whitlerd 223995965 Apr 16 19:03 ATLAS.root_0
[2026-04-16 21:50:03] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 16 19:03 start_atlas.sh
[2026-04-16 21:50:03] -rw-r--r-- 2 whitlerd whitlerd    656937 Apr 16 19:03 input.tar.gz
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd 188413254 Apr 16 21:48 HITS.pool.root.1
[2026-04-16 21:50:03] -rw------- 1 whitlerd whitlerd   1249280 Apr 16 21:50 result.tar.gz
21:50:05 (426641): run_atlas exited; CPU time 38990.528215
21:50:05 (426641): called boinc_finish(0)

</stderr_txt>
]]>

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