Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:08:34 (3078924): wrapper (7.7.26015): starting
14:08:34 (3078924): wrapper: running run_atlas (--nthreads 12)
[2026-04-16 14:08:34] Arguments: --nthreads 12
[2026-04-16 14:08:34] Threads: 12
[2026-04-16 14:08:34] Checking for CVMFS
[2026-04-16 14:08:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-16 14:08:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-16 14:08:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-16 14:08:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-16 14:08:34] 2.13.3.0 9943 160783 133504 158537 2 16 31570795 39288832 8938 16776704 0 196960984 99.556 301833065 34250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-16 14:08:34] CVMFS is ok
[2026-04-16 14:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-16 14:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-16 14:08:34] Further information can be found at the LHC@home message board.
[2026-04-16 14:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-16 14:08:34] Checking for apptainer binary...
[2026-04-16 14:08:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-16 14:08:34] Running /usr/bin/apptainer --version
[2026-04-16 14:08:34] apptainer version 1.4.5-2.el9
[2026-04-16 14:08:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-16 14:08:35] c-210-6.aglt2.org
[2026-04-16 14:08:35] apptainer works
[2026-04-16 14:08:35] Set ATHENA_PROC_NUMBER=12
[2026-04-16 14:08:35] Set ATHENA_CORE_NUMBER=12
[2026-04-16 14:08:35] Starting ATLAS job with PandaID=7082829902
[2026-04-16 14:08:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-16 16:59:31]  *** The last 200 lines of the pilot log: ***
[2026-04-16 16:59:31] 2026-04-16 20:58:23,593 | INFO     | extracted standard memory fields from prmon json
[2026-04-16 16:59:31] 2026-04-16 20:58:23,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-16 16:59:31] 2026-04-16 20:58:23,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-16 16:59:31] 2026-04-16 20:58:23,597 | INFO     | fitting pss+swap vs Time
[2026-04-16 16:59:31] 2026-04-16 20:58:23,598 | INFO     | sum of square deviations: 1418335983.4036167
[2026-04-16 16:59:31] 2026-04-16 20:58:23,599 | INFO     | sum of deviations: 34838871899.48791
[2026-04-16 16:59:31] 2026-04-16 20:58:23,599 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,599 | INFO     | mean y: 2713208.753012048
[2026-04-16 16:59:31] 2026-04-16 20:58:23,599 | INFO     | intersect: 2713208.753012048
[2026-04-16 16:59:31] 2026-04-16 20:58:23,599 | INFO     | chi2: 1.7373078021462667
[2026-04-16 16:59:31] 2026-04-16 20:58:23,600 | INFO     | sum of square deviations: 1293990685.9006224
[2026-04-16 16:59:31] 2026-04-16 20:58:23,601 | INFO     | sum of deviations: 33520665104.614918
[2026-04-16 16:59:31] 2026-04-16 20:58:23,601 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,601 | INFO     | mean y: 2711591.596273292
[2026-04-16 16:59:31] 2026-04-16 20:58:23,601 | INFO     | intersect: 2711591.596273292
[2026-04-16 16:59:31] 2026-04-16 20:58:23,602 | INFO     | chi2: 1.7388674337864571
[2026-04-16 16:59:31] 2026-04-16 20:58:23,602 | INFO     | current chi2=1.7388674337864571 (change=-0.08977290254862702 %)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,602 | INFO     | right removable region: 160
[2026-04-16 16:59:31] 2026-04-16 20:58:23,602 | INFO     | sum of square deviations: 1293988245.9006224
[2026-04-16 16:59:31] 2026-04-16 20:58:23,603 | INFO     | sum of deviations: 2385688596.043477
[2026-04-16 16:59:31] 2026-04-16 20:58:23,603 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,603 | INFO     | mean y: 2752567.7391304346
[2026-04-16 16:59:31] 2026-04-16 20:58:23,603 | INFO     | intersect: 2752567.7391304346
[2026-04-16 16:59:31] 2026-04-16 20:58:23,604 | INFO     | chi2: 0.045219490163994756
[2026-04-16 16:59:31] 2026-04-16 20:58:23,604 | INFO     | current chi2=0.045219490163994756 (change=97.39715149450599 %)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,604 | INFO     | sum of square deviations: 1177138840.942304
[2026-04-16 16:59:31] 2026-04-16 20:58:23,605 | INFO     | sum of deviations: 5425667422.365382
[2026-04-16 16:59:31] 2026-04-16 20:58:23,605 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,605 | INFO     | mean y: 2748584.7115384615
[2026-04-16 16:59:31] 2026-04-16 20:58:23,605 | INFO     | intersect: 2748584.7115384615
[2026-04-16 16:59:31] 2026-04-16 20:58:23,606 | INFO     | chi2: 0.0030604611632440233
[2026-04-16 16:59:31] 2026-04-16 20:58:23,606 | INFO     | current chi2=0.0030604611632440233 (change=93.231986578918 %)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,606 | INFO     | sum of square deviations: 1067535870.9403945
[2026-04-16 16:59:31] 2026-04-16 20:58:23,608 | INFO     | sum of deviations: 3989434405.033113
[2026-04-16 16:59:31] 2026-04-16 20:58:23,608 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,608 | INFO     | mean y: 2750578.655629139
[2026-04-16 16:59:31] 2026-04-16 20:58:23,608 | INFO     | intersect: 2750578.655629139
[2026-04-16 16:59:31] 2026-04-16 20:58:23,608 | INFO     | chi2: 0.0018504824486472028
[2026-04-16 16:59:31] 2026-04-16 20:58:23,609 | INFO     | current chi2=0.0018504824486472028 (change=39.53582973470145 %)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,609 | INFO     | sum of square deviations: 964965498.4726006
[2026-04-16 16:59:31] 2026-04-16 20:58:23,611 | INFO     | sum of deviations: 3095220609.0342464
[2026-04-16 16:59:31] 2026-04-16 20:58:23,612 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,612 | INFO     | mean y: 2751903.7328767125
[2026-04-16 16:59:31] 2026-04-16 20:58:23,612 | INFO     | intersect: 2751903.7328767125
[2026-04-16 16:59:31] 2026-04-16 20:58:23,612 | INFO     | chi2: 0.001439664976693247
[2026-04-16 16:59:31] 2026-04-16 20:58:23,613 | INFO     | current chi2=0.001439664976693247 (change=22.200560305464364 %)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,613 | INFO     | left removable region: 20
[2026-04-16 16:59:31] 2026-04-16 20:58:23,613 | INFO     | sum of square deviations: 850815252.9714288
[2026-04-16 16:59:31] 2026-04-16 20:58:23,614 | INFO     | sum of deviations: 2737782678.742858
[2026-04-16 16:59:31] 2026-04-16 20:58:23,614 | INFO     | mean x (centered): 0.0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,614 | INFO     | mean y: 2751330.3785714284
[2026-04-16 16:59:31] 2026-04-16 20:58:23,614 | INFO     | intersect: 2751330.3785714284
[2026-04-16 16:59:31] 2026-04-16 20:58:23,615 | INFO     | chi2: 0.0014394547773570012
[2026-04-16 16:59:31] 2026-04-16 20:58:23,616 | INFO     | current memory leak: 3.22 B/s (using 140 data points, chi2=0.00)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,617 | INFO     | could have reported an average CPU frequency of 2600 MHz (9 samples)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,617 | INFO     | ..............................
[2026-04-16 16:59:31] 2026-04-16 20:58:23,617 | INFO     | . Timing measurements:
[2026-04-16 16:59:31] 2026-04-16 20:58:23,617 | INFO     | . get job = 0 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,617 | INFO     | . initial setup = 12 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,618 | INFO     | . payload setup = 29 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,618 | INFO     | . stage-in = 0 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,618 | INFO     | . payload execution = 10118 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,618 | INFO     | . stage-out = 1 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,618 | INFO     | . log creation = 0 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,618 | INFO     | ..............................
[2026-04-16 16:59:31] 2026-04-16 20:58:23,724 | INFO     | 
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | job summary report
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | --------------------------------------------------
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | PanDA job id: 7082829902
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | task id: 49499882
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | errors: (none)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-16 16:59:31] 2026-04-16 20:58:23,725 | INFO     | pilot state: finished 
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | transexitcode: 0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | exeerrorcode: 0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | exeerrordiag: 
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | exitcode: 0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | exitmsg: OK
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | cpuconsumptiontime: 63563 s
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | nevents: 400
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | neventsw: 0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | pid: 3089092
[2026-04-16 16:59:31] 2026-04-16 20:58:23,726 | INFO     | pgrp: 3089092
[2026-04-16 16:59:31] 2026-04-16 20:58:23,727 | INFO     | corecount: 12
[2026-04-16 16:59:31] 2026-04-16 20:58:23,727 | INFO     | event service: False
[2026-04-16 16:59:31] 2026-04-16 20:58:23,727 | INFO     | sizes: {0: 2279805, 1: 2281634, 10151: 2310254, 10153: 2319308, 10155: 2319510}
[2026-04-16 16:59:31] 2026-04-16 20:58:23,727 | INFO     | --------------------------------------------------
[2026-04-16 16:59:31] 2026-04-16 20:58:23,727 | INFO     | 
[2026-04-16 16:59:31] 2026-04-16 20:58:23,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-16 16:59:31] 2026-04-16 20:58:23,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-16 16:59:31] 2026-04-16 20:58:23,750 | INFO     | job 7082829902 has completed (purged errors)
[2026-04-16 16:59:31] 2026-04-16 20:58:23,751 | INFO     | overall cleanup function is called
[2026-04-16 16:59:31] 2026-04-16 20:58:24,762 | INFO     | --- collectZombieJob: --- 10, [3089092]
[2026-04-16 16:59:31] 2026-04-16 20:58:24,762 | INFO     | zombie collector waiting for pid 3089092
[2026-04-16 16:59:31] 2026-04-16 20:58:24,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-16 16:59:31] 2026-04-16 20:58:24,762 | INFO     | collected zombie processes
[2026-04-16 16:59:31] 2026-04-16 20:58:24,762 | INFO     | will attempt to kill all subprocesses of pid=3089092
[2026-04-16 16:59:31] 2026-04-16 20:58:25,107 | INFO     | process IDs to be killed: [3089092] (in reverse order)
[2026-04-16 16:59:31] 2026-04-16 20:58:25,213 | WARNING  | found no corresponding commands to process id(s)
[2026-04-16 16:59:31] 2026-04-16 20:58:25,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-16 16:59:31] 2026-04-16 20:58:25,224 | INFO     | did not find any defunct processes belonging to 3089092
[2026-04-16 16:59:31] 2026-04-16 20:58:25,234 | INFO     | did not find any defunct processes belonging to 3089092
[2026-04-16 16:59:31] 2026-04-16 20:58:25,235 | INFO     | Ready for new job
[2026-04-16 16:59:31] 2026-04-16 20:58:25,236 | INFO     | **************************************
[2026-04-16 16:59:31] 2026-04-16 20:58:25,237 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-16 16:59:31] 2026-04-16 20:58:25,237 | INFO     | **************************************
[2026-04-16 16:59:31] 2026-04-16 20:58:25,237 | INFO     | 
[2026-04-16 16:59:31] 2026-04-16 20:58:25,239 | INFO     | architecture information:
[2026-04-16 16:59:31] 2026-04-16 20:58:25,239 | INFO     | executing command: cat /etc/os-release
[2026-04-16 16:59:31] 2026-04-16 20:58:25,256 | INFO     | cat /etc/os-release:
[2026-04-16 16:59:31] NAME="CentOS Linux"
[2026-04-16 16:59:31] VERSION="7 (Core)"
[2026-04-16 16:59:31] ID="centos"
[2026-04-16 16:59:31] ID_LIKE="rhel fedora"
[2026-04-16 16:59:31] VERSION_ID="7"
[2026-04-16 16:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-16 16:59:31] ANSI_COLOR="0;31"
[2026-04-16 16:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-16 16:59:31] HOME_URL="https://www.centos.org/"
[2026-04-16 16:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-16 16:59:31] 
[2026-04-16 16:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-16 16:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-16 16:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-16 16:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-16 16:59:31] 
[2026-04-16 16:59:31] 2026-04-16 20:58:25,257 | INFO     | **************************************
[2026-04-16 16:59:31] 2026-04-16 20:58:25,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-16 16:59:31] 2026-04-16 20:58:25,785 | INFO     | sufficient remaining disk space (53629419520 B)
[2026-04-16 16:59:31] 2026-04-16 20:58:25,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-16 16:59:31] 2026-04-16 20:58:25,785 | INFO     | current server update state: UPDATING_FINAL
[2026-04-16 16:59:31] 2026-04-16 20:58:25,786 | INFO     | update_server=False
[2026-04-16 16:59:31] 2026-04-16 20:58:25,786 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-16 16:59:31] 2026-04-16 20:58:26,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-16 16:59:31] 2026-04-16 20:58:26,027 | INFO     | aborting loop
[2026-04-16 16:59:31] 2026-04-16 20:58:26,581 | INFO     | all data control threads have been joined
[2026-04-16 16:59:31] 2026-04-16 20:58:26,792 | INFO     | [job] retrieve thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:26,817 | INFO     | [job] validate thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:26,873 | INFO     | [payload] execute_payloads thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:26,876 | INFO     | [data] copytool_in thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:27,032 | INFO     | [job] job monitor thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:27,080 | INFO     | all payload control threads have been joined
[2026-04-16 16:59:31] 2026-04-16 20:58:27,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-16 16:59:31] 2026-04-16 20:58:27,381 | INFO     | [payload] validate_post thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:27,482 | INFO     | all job control threads have been joined
[2026-04-16 16:59:31] 2026-04-16 20:58:27,588 | INFO     | [data] control thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:27,622 | INFO     | [payload] validate_pre thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:28,085 | INFO     | [payload] control thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:28,091 | INFO     | [job] create_data_payload thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:28,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-16 16:59:31] 2026-04-16 20:58:28,234 | INFO     | [payload] failed_post thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:28,487 | INFO     | [job] control thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:28,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-16 16:59:31] 2026-04-16 20:58:29,129 | INFO     | [data] copytool_out thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:29,746 | INFO     | [job] queue monitor thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:32,195 | INFO     | [data] queue_monitor thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:36,662 | INFO     | job.realtimelogging is not enabled
[2026-04-16 16:59:31] 2026-04-16 20:58:37,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-16 16:59:31] 2026-04-16 20:58:55,519 | INFO     | PID=3083188 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-16 16:59:31] 2026-04-16 20:58:55,520 | INFO     | .. there are 13 such processes running
[2026-04-16 16:59:31] 2026-04-16 20:58:55,521 | INFO     | found 0 job(s) in 20 queues
[2026-04-16 16:59:31] 2026-04-16 20:58:55,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-16 16:59:31] 2026-04-16 20:58:55,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-16 16:59:31] 2026-04-16 20:59:24,415 | INFO     | [monitor] cgroup control has ended
[2026-04-16 16:59:31] 2026-04-16 20:59:26,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301125379904)>', '<ExcThread(monitor, started 140300676757248)>']
[2026-04-16 16:59:31] 2026-04-16 20:59:26,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-16 16:59:31] 2026-04-16 20:59:26,693 | INFO     | [monitor] control thread has ended
[2026-04-16 16:59:31] 2026-04-16 20:59:31,207 | INFO     | all workflow threads have been joined
[2026-04-16 16:59:31] 2026-04-16 20:59:31,207 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-16 16:59:31] 2026-04-16 20:59:31,207 | INFO     | traces error code: 0
[2026-04-16 16:59:31] 2026-04-16 20:59:31,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-16 16:59:31] 2026-04-16 20:59:31,417 [wrapper] ==== pilot stdout END ====
[2026-04-16 16:59:31] 2026-04-16 20:59:31,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-16 16:59:31] 2026-04-16 20:59:31,431 [wrapper] pilotpid: 3083188
[2026-04-16 16:59:31] 2026-04-16 20:59:31,445 [wrapper] Pilot exit status: 0
[2026-04-16 16:59:31] 2026-04-16 20:59:31,481 [wrapper] pandaids: 7082829902
[2026-04-16 16:59:31] 2026-04-16 20:59:31,544 [wrapper] cleanup supervisor_pilot 3392750 3083189
[2026-04-16 16:59:31] 2026-04-16 20:59:31,548 [wrapper] Test setup, not cleaning
[2026-04-16 16:59:31] 2026-04-16 20:59:31,553 [wrapper] apfmon messages muted
[2026-04-16 16:59:31] 2026-04-16 20:59:31,557 [wrapper] ==== wrapper stdout END ====
[2026-04-16 16:59:31] 2026-04-16 20:59:31,562 [wrapper] ==== wrapper stderr END ====
[2026-04-16 16:59:31]  *** Error codes and diagnostics ***
[2026-04-16 16:59:31]     "exeErrorCode": 0,
[2026-04-16 16:59:31]     "pilotErrorCode": 0,
[2026-04-16 16:59:31]  *** Listing of results directory ***
[2026-04-16 16:59:31] total 491588
[2026-04-16 16:59:31] -rwx------. 1 boincer umatlas     36322 Apr  8 05:55 runpilot2-wrapper.sh
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas    644190 Apr  8 13:58 pilot3.tar.gz
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas      5094 Apr  8 14:03 queuedata.json
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas       100 Apr 16 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-16 16:59:31] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 16 14:08 run_atlas
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas       105 Apr 16 14:08 job.xml
[2026-04-16 16:59:31] -rw-r--r--. 2 boincer umatlas 301444315 Apr 16 14:08 EVNT.49475312._000014.pool.root.1
[2026-04-16 16:59:31] -rw-r--r--. 2 boincer umatlas     15665 Apr 16 14:08 start_atlas.sh
[2026-04-16 16:59:31] drwxrwx--x. 2 boincer umatlas      4096 Apr 16 14:08 shared
[2026-04-16 16:59:31] -rw-r--r--. 2 boincer umatlas    656931 Apr 16 14:08 input.tar.gz
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas         0 Apr 16 14:08 boinc_lockfile
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas      2623 Apr 16 14:08 pandaJob.out
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas        57 Apr 16 14:08 setup.sh.local
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas    997712 Apr 16 14:08 agis_schedconf.cvmfs.json
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas   1511633 Apr 16 14:08 agis_ddmendpoints.agis.ALL.json
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas       434 Apr 16 14:09 workernode_map.json
[2026-04-16 16:59:31] drwx------. 5 boincer umatlas      4096 Apr 16 14:09 pilot3
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas 195170494 Apr 16 16:57 HITS.49499882._000342.pool.root.1
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas      6575 Apr 16 16:57 init_data.xml
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas       489 Apr 16 16:57 boinc_task_state.xml
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas        95 Apr 16 16:58 pilot_heartbeat.json
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas      1044 Apr 16 16:58 memory_monitor_summary.json
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas    421927 Apr 16 16:58 log.49499882._000342.job.log.tgz.1
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas      6399 Apr 16 16:58 heartbeat_new.json
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas      6290 Apr 16 16:58 heartbeat.json
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas        28 Apr 16 16:59 wrapper_checkpoint.txt
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 16:59 boinc_mmap_file
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas      4891 Apr 16 16:59 pilotlog.txt
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas    932391 Apr 16 16:59 log.49499882._000342.job.log.1
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas       357 Apr 16 16:59 output.list
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas       410 Apr 16 16:59 runtime_log
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas   1372160 Apr 16 16:59 result.tar.gz
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas      8961 Apr 16 16:59 runtime_log.err
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas       655 Apr 16 16:59 260bce326140.diag
[2026-04-16 16:59:31] -rw-r--r--. 1 boincer umatlas     20844 Apr 16 16:59 stderr.txt
[2026-04-16 16:59:31] HITS file was successfully produced:
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas 195170494 Apr 16 16:57 shared/HITS.pool.root.1
[2026-04-16 16:59:31]  *** Contents of shared directory: ***
[2026-04-16 16:59:31] total 486984
[2026-04-16 16:59:31] -rw-r--r--. 2 boincer umatlas 301444315 Apr 16 14:08 ATLAS.root_0
[2026-04-16 16:59:31] -rw-r--r--. 2 boincer umatlas     15665 Apr 16 14:08 start_atlas.sh
[2026-04-16 16:59:31] -rw-r--r--. 2 boincer umatlas    656931 Apr 16 14:08 input.tar.gz
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas 195170494 Apr 16 16:57 HITS.pool.root.1
[2026-04-16 16:59:31] -rw-------. 1 boincer umatlas   1372160 Apr 16 16:59 result.tar.gz
16:59:32 (3078924): run_atlas exited; CPU time 63745.101784
16:59:32 (3078924): called boinc_finish(0)

</stderr_txt>
]]>

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