Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:59 (551896): wrapper (7.7.26015): starting
17:21:59 (551896): wrapper: running run_atlas (--nthreads 4)
[2026-04-15 17:21:59] Arguments: --nthreads 4
[2026-04-15 17:21:59] Threads: 4
[2026-04-15 17:21:59] Checking for CVMFS
[2026-04-15 17:21:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-15 17:21:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-15 17:21:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-15 17:21:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-15 17:21:59] 2.13.3.0 279189 618 47208 158506 2 49 4062717 4096001 92 130560 0 645718 99.974 149290 4095 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-15 17:21:59] CVMFS is ok
[2026-04-15 17:21:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-15 17:21:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-15 17:21:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-15 17:21:59] Further information can be found at the LHC@home message board.
[2026-04-15 17:21:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-15 17:21:59] Checking for apptainer binary...
[2026-04-15 17:21:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-15 17:21:59] Running /usr/bin/apptainer --version
[2026-04-15 17:21:59] apptainer version 1.4.5
[2026-04-15 17:21:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-15 17:21:59] OptiPlex7070-Ubuntu
[2026-04-15 17:21:59] apptainer works
[2026-04-15 17:21:59] Set ATHENA_PROC_NUMBER=4
[2026-04-15 17:21:59] Set ATHENA_CORE_NUMBER=4
[2026-04-15 17:21:59] Starting ATLAS job with PandaID=7086869431
[2026-04-15 17:21:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-15 19:24:31]  *** The last 200 lines of the pilot log: ***
[2026-04-15 19:24:31] 2026-04-15 23:23:43,032 | INFO     | this job has now completed (state=finished)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,032 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,032 | INFO     | log transfer has been attempted: DONE
[2026-04-15 19:24:31] 2026-04-15 23:23:43,032 | INFO     | job 7086869431 has finished - writing final server update
[2026-04-15 19:24:31] 2026-04-15 23:23:43,032 | INFO     | total number of processed events: 400 (read)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,034 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7086869431/memory_monitor_summary.json (trf name=prmon)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,034 | INFO     | extracted standard info from prmon json
[2026-04-15 19:24:31] 2026-04-15 23:23:43,034 | INFO     | extracted standard memory fields from prmon json
[2026-04-15 19:24:31] 2026-04-15 23:23:43,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-15 19:24:31] 2026-04-15 23:23:43,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | fitting pss+swap vs Time
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | sum of square deviations: 535786790.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | sum of deviations: -33100870297.999992
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | mean x (centered): 0.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | mean y: 2472364.6
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | intersect: 2472364.6
[2026-04-15 19:24:31] 2026-04-15 23:23:43,036 | INFO     | chi2: 2.267012448847087
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | sum of square deviations: 471562330.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | sum of deviations: -23696745762.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | mean x (centered): 0.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | mean y: 2494148.8173913043
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | intersect: 2494148.8173913043
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | chi2: 1.6205850410624159
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | current chi2=1.6205850410624159 (change=28.514506310427123 %)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,037 | INFO     | sum of square deviations: 412686807.5
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | sum of deviations: -21367898010.000004
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | mean x (centered): 0.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | mean y: 2500180.909090909
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | intersect: 2500180.909090909
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | chi2: 1.6154668675894406
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | current chi2=1.6154668675894406 (change=0.31582257908661954 %)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | right removable region: 109
[2026-04-15 19:24:31] 2026-04-15 23:23:43,038 | INFO     | sum of square deviations: 471562330.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | sum of deviations: -46168015066.00001
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | mean x (centered): 0.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | mean y: 2502434.913043478
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | intersect: 2502434.913043478
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | chi2: 0.8990721268555233
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | current chi2=0.8990721268555233 (change=60.34110322981437 %)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | sum of square deviations: 412686807.5
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | sum of deviations: -41881015768.99999
[2026-04-15 19:24:31] 2026-04-15 23:23:43,039 | INFO     | mean x (centered): 0.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | mean y: 2491310.981818182
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | intersect: 2491310.981818182
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | chi2: 0.8986345643439735
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | current chi2=0.8986345643439735 (change=0.048668232334169476 %)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | left removable region: 10
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | sum of square deviations: 300842850.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | sum of deviations: -29962553583.000004
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | mean x (centered): 0.0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | mean y: 2525403.414141414
[2026-04-15 19:24:31] 2026-04-15 23:23:43,040 | INFO     | intersect: 2525403.414141414
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | chi2: 0.19435871223522855
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | current memory leak: -99.60 B/s (using 99 data points, chi2=0.19)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | could have reported an average CPU frequency of 3691 MHz (8 samples)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | ..............................
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . Timing measurements:
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . get job = 0 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . initial setup = 5 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . payload setup = 5 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . stage-in = 0 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . payload execution = 7266 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . stage-out = 0 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | . log creation = 0 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,041 | INFO     | ..............................
[2026-04-15 19:24:31] 2026-04-15 23:23:43,533 | INFO     | 
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | job summary report
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | --------------------------------------------------
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | PanDA job id: 7086869431
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | task id: 49645815
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | errors: (none)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | pilot state: finished 
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | transexitcode: 0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | exeerrorcode: 0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | exeerrordiag: 
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | exitcode: 0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | exitmsg: OK
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | cpuconsumptiontime: 28255 s
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | nevents: 400
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | neventsw: 0
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | pid: 560603
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | pgrp: 560603
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | corecount: 4
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | event service: False
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | sizes: {0: 2281594, 10: 2281594, 7276: 2318109, 7278: 2318303}
[2026-04-15 19:24:31] 2026-04-15 23:23:43,534 | INFO     | --------------------------------------------------
[2026-04-15 19:24:31] 2026-04-15 23:23:43,535 | INFO     | 
[2026-04-15 19:24:31] 2026-04-15 23:23:43,535 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | job 7086869431 has completed (purged errors)
[2026-04-15 19:24:31] 2026-04-15 23:23:43,546 | INFO     | overall cleanup function is called
[2026-04-15 19:24:31] 2026-04-15 23:23:44,211 | INFO     | PID=556085 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-15 19:24:31] 2026-04-15 23:23:44,556 | INFO     | --- collectZombieJob: --- 10, [560603]
[2026-04-15 19:24:31] 2026-04-15 23:23:44,557 | INFO     | zombie collector waiting for pid 560603
[2026-04-15 19:24:31] 2026-04-15 23:23:44,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-15 19:24:31] 2026-04-15 23:23:44,557 | INFO     | collected zombie processes
[2026-04-15 19:24:31] 2026-04-15 23:23:44,557 | INFO     | will attempt to kill all subprocesses of pid=560603
[2026-04-15 19:24:31] 2026-04-15 23:23:44,634 | INFO     | process IDs to be killed: [560603] (in reverse order)
[2026-04-15 19:24:31] 2026-04-15 23:23:44,658 | WARNING  | found no corresponding commands to process id(s)
[2026-04-15 19:24:31] 2026-04-15 23:23:44,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-15 19:24:31] 2026-04-15 23:23:44,661 | INFO     | did not find any defunct processes belonging to 560603
[2026-04-15 19:24:31] 2026-04-15 23:23:44,664 | INFO     | did not find any defunct processes belonging to 560603
[2026-04-15 19:24:31] 2026-04-15 23:23:44,664 | INFO     | Ready for new job
[2026-04-15 19:24:31] 2026-04-15 23:23:44,666 | INFO     | **************************************
[2026-04-15 19:24:31] 2026-04-15 23:23:44,666 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-15 19:24:31] 2026-04-15 23:23:44,666 | INFO     | **************************************
[2026-04-15 19:24:31] 2026-04-15 23:23:44,666 | INFO     | 
[2026-04-15 19:24:31] 2026-04-15 23:23:44,667 | INFO     | architecture information:
[2026-04-15 19:24:31] 2026-04-15 23:23:44,667 | INFO     | executing command: cat /etc/os-release
[2026-04-15 19:24:31] 2026-04-15 23:23:44,677 | INFO     | cat /etc/os-release:
[2026-04-15 19:24:31] NAME="CentOS Linux"
[2026-04-15 19:24:31] VERSION="7 (Core)"
[2026-04-15 19:24:31] ID="centos"
[2026-04-15 19:24:31] ID_LIKE="rhel fedora"
[2026-04-15 19:24:31] VERSION_ID="7"
[2026-04-15 19:24:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-15 19:24:31] ANSI_COLOR="0;31"
[2026-04-15 19:24:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-15 19:24:31] HOME_URL="https://www.centos.org/"
[2026-04-15 19:24:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-15 19:24:31] 
[2026-04-15 19:24:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-15 19:24:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-15 19:24:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-15 19:24:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-15 19:24:31] 
[2026-04-15 19:24:31] 2026-04-15 23:23:44,677 | INFO     | **************************************
[2026-04-15 19:24:31] 2026-04-15 23:23:45,180 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-04-15 19:24:31] 2026-04-15 23:23:45,190 | INFO     | sufficient remaining disk space (404832124928 B)
[2026-04-15 19:24:31] 2026-04-15 23:23:45,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-15 19:24:31] 2026-04-15 23:23:45,190 | INFO     | current server update state: UPDATING_FINAL
[2026-04-15 19:24:31] 2026-04-15 23:23:45,190 | INFO     | update_server=False
[2026-04-15 19:24:31] 2026-04-15 23:23:45,190 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-15 19:24:31] 2026-04-15 23:23:45,191 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-15 19:24:31] 2026-04-15 23:23:45,191 | INFO     | found 0 job(s) in 20 queues
[2026-04-15 19:24:31] 2026-04-15 23:23:45,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-15 19:24:31] 2026-04-15 23:23:45,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-15 19:24:31] 2026-04-15 23:23:45,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-15 19:24:31] 2026-04-15 23:23:45,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-15 19:24:31] 2026-04-15 23:23:45,456 | INFO     | all payload control threads have been joined
[2026-04-15 19:24:31] 2026-04-15 23:23:45,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-15 19:24:31] 2026-04-15 23:23:45,588 | INFO     | aborting loop
[2026-04-15 19:24:31] 2026-04-15 23:23:45,959 | INFO     | all data control threads have been joined
[2026-04-15 19:24:31] 2026-04-15 23:23:46,196 | INFO     | [job] retrieve thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,204 | INFO     | [payload] validate_pre thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,353 | INFO     | [data] copytool_in thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,460 | INFO     | all job control threads have been joined
[2026-04-15 19:24:31] 2026-04-15 23:23:46,461 | INFO     | [payload] control thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,499 | INFO     | [payload] failed_post thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,546 | INFO     | [payload] execute_payloads thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,592 | INFO     | [job] job monitor thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:46,965 | INFO     | [data] control thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:47,131 | INFO     | [payload] validate_post thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:47,197 | INFO     | [data] copytool_out thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:47,465 | INFO     | [job] control thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:47,555 | INFO     | [job] create_data_payload thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:47,639 | INFO     | [job] validate thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:48,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-15 19:24:31] 2026-04-15 23:23:49,099 | INFO     | [job] queue monitor thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:49,196 | INFO     | [data] queue_monitor thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:23:56,165 | INFO     | job.realtimelogging is not enabled
[2026-04-15 19:24:31] 2026-04-15 23:23:57,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-15 19:24:31] 2026-04-15 23:24:25,044 | INFO     | [monitor] cgroup control has ended
[2026-04-15 19:24:31] 2026-04-15 23:24:26,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131069833295680)>', '<ExcThread(monitor, started 131068912989952)>']
[2026-04-15 19:24:31] 2026-04-15 23:24:26,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-15 19:24:31] 2026-04-15 23:24:26,400 | INFO     | [monitor] control thread has ended
[2026-04-15 19:24:31] 2026-04-15 23:24:31,100 | INFO     | all workflow threads have been joined
[2026-04-15 19:24:31] 2026-04-15 23:24:31,101 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-15 19:24:31] 2026-04-15 23:24:31,101 | INFO     | traces error code: 0
[2026-04-15 19:24:31] 2026-04-15 23:24:31,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-15 19:24:31] 2026-04-15 23:24:31,180 [wrapper] ==== pilot stdout END ====
[2026-04-15 19:24:31] 2026-04-15 23:24:31,182 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-15 19:24:31] 2026-04-15 23:24:31,184 [wrapper] pilotpid: 556085
[2026-04-15 19:24:31] 2026-04-15 23:24:31,188 [wrapper] Pilot exit status: 0
[2026-04-15 19:24:31] 2026-04-15 23:24:31,195 [wrapper] pandaids: 7086869431
[2026-04-15 19:24:31] 2026-04-15 23:24:31,211 [wrapper] cleanup supervisor_pilot  585384 556086
[2026-04-15 19:24:31] 2026-04-15 23:24:31,213 [wrapper] Test setup, not cleaning
[2026-04-15 19:24:31] 2026-04-15 23:24:31,215 [wrapper] apfmon messages muted
[2026-04-15 19:24:31] 2026-04-15 23:24:31,217 [wrapper] ==== wrapper stdout END ====
[2026-04-15 19:24:31] 2026-04-15 23:24:31,218 [wrapper] ==== wrapper stderr END ====
[2026-04-15 19:24:31]  *** Error codes and diagnostics ***
[2026-04-15 19:24:31]     "exeErrorCode": 0,
[2026-04-15 19:24:31]     "pilotErrorCode": 0,
[2026-04-15 19:24:31]  *** Listing of results directory ***
[2026-04-15 19:24:31] total 416464
[2026-04-15 19:24:31] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr 10 23:16 pilot3.tar.gz
[2026-04-15 19:24:31] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr 10 23:19 queuedata.json
[2026-04-15 19:24:31] -rwx------ 1 whitlerd whitlerd     36322 Apr 10 23:20 runpilot2-wrapper.sh
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 15 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-15 19:24:31] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 15 17:21 run_atlas
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 15 17:21 job.xml
[2026-04-15 19:24:31] -rw-r--r-- 2 whitlerd whitlerd    656936 Apr 15 17:21 input.tar.gz
[2026-04-15 19:24:31] -rw-r--r-- 2 whitlerd whitlerd 225055254 Apr 15 17:21 EVNT.48629115._000037.pool.root.1
[2026-04-15 19:24:31] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 15 17:21 start_atlas.sh
[2026-04-15 19:24:31] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 15 17:21 shared
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd      6361 Apr 15 17:21 init_data.xml
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 15 17:21 boinc_setup_complete
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 15 17:21 boinc_lockfile
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd      2625 Apr 15 17:21 pandaJob.out
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd    996676 Apr 15 17:22 agis_schedconf.cvmfs.json
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd   1511633 Apr 15 17:22 agis_ddmendpoints.agis.ALL.json
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd       439 Apr 15 17:22 workernode_map.json
[2026-04-15 19:24:31] drwx------ 5 whitlerd whitlerd      4096 Apr 15 17:22 pilot3
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd        95 Apr 15 19:23 pilot_heartbeat.json
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd 195395467 Apr 15 19:23 HITS.49645815._000916.pool.root.1
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd       487 Apr 15 19:23 boinc_task_state.xml
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd      1036 Apr 15 19:23 memory_monitor_summary.json
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd    271588 Apr 15 19:23 log.49645815._000916.job.log.tgz.1
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd      6389 Apr 15 19:23 heartbeat_new.json
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd      6280 Apr 15 19:23 heartbeat.json
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 15 19:24 boinc_mmap_file
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr 15 19:24 wrapper_checkpoint.txt
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd      4634 Apr 15 19:24 pilotlog.txt
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd    700215 Apr 15 19:24 log.49645815._000916.job.log.1
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd       357 Apr 15 19:24 output.list
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 15 19:24 runtime_log
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd    993280 Apr 15 19:24 result.tar.gz
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd      8676 Apr 15 19:24 runtime_log.err
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd       659 Apr 15 19:24 bdeeb0055c45.diag
[2026-04-15 19:24:31] -rw-rw-r-- 1 whitlerd whitlerd     21042 Apr 15 19:24 stderr.txt
[2026-04-15 19:24:31] HITS file was successfully produced:
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd 195395467 Apr 15 19:23 shared/HITS.pool.root.1
[2026-04-15 19:24:31]  *** Contents of shared directory: ***
[2026-04-15 19:24:31] total 412240
[2026-04-15 19:24:31] -rw-r--r-- 2 whitlerd whitlerd    656936 Apr 15 17:21 input.tar.gz
[2026-04-15 19:24:31] -rw-r--r-- 2 whitlerd whitlerd 225055254 Apr 15 17:21 ATLAS.root_0
[2026-04-15 19:24:31] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 15 17:21 start_atlas.sh
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd 195395467 Apr 15 19:23 HITS.pool.root.1
[2026-04-15 19:24:31] -rw------- 1 whitlerd whitlerd    993280 Apr 15 19:24 result.tar.gz
19:24:32 (551896): run_atlas exited; CPU time 28331.920461
19:24:32 (551896): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN