Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
14:11:43 (3781996): wrapper (7.7.26015): starting
14:11:43 (3781996): wrapper: running run_atlas (--nthreads 4)
[2026-04-15 14:11:43] Arguments: --nthreads 4
[2026-04-15 14:11:43] Threads: 4
[2026-04-15 14:11:43] Checking for CVMFS
[2026-04-15 14:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-15 14:11:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-15 14:11:44] Running cvmfs_config stat atlas.cern.ch
[2026-04-15 14:11:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-15 14:11:44] 2.13.3.0 3754345 75 41540 158496 0 188 2498898 4096000 916 130560 0 53773 100.000 11 2 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-15 14:11:44] CVMFS is ok
[2026-04-15 14:11:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-15 14:11:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-15 14:11:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-15 14:11:44] Further information can be found at the LHC@home message board.
[2026-04-15 14:11:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-15 14:11:44] Checking for apptainer binary...
[2026-04-15 14:11:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-15 14:11:44] Running /usr/bin/apptainer --version
[2026-04-15 14:11:44] apptainer version 1.4.5
[2026-04-15 14:11:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-15 14:11:44] T5810-Ubuntu
[2026-04-15 14:11:44] apptainer works
[2026-04-15 14:11:44] Set ATHENA_PROC_NUMBER=4
[2026-04-15 14:11:44] Set ATHENA_CORE_NUMBER=4
[2026-04-15 14:11:44] Starting ATLAS job with PandaID=7092143296
[2026-04-15 14:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-15 16:13:34]  *** The last 200 lines of the pilot log: ***
[2026-04-15 16:13:34] 2026-04-15 20:13:21,704 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,704 | INFO     | mean y: 2353237.151260504
[2026-04-15 16:13:34] 2026-04-15 20:13:21,704 | INFO     | intersect: 2353237.151260504
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | chi2: 1.3127078824867917
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | sum of square deviations: 459366752.5
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | sum of deviations: 8985847658.000002
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | mean y: 2352000.9298245613
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | intersect: 2352000.9298245613
[2026-04-15 16:13:34] 2026-04-15 20:13:21,705 | INFO     | chi2: 1.31485899251296
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | current chi2=1.31485899251296 (change=-0.16386814270461536 %)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | right removable region: 113
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | sum of square deviations: 459366752.5
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | sum of deviations: -3527034365.500001
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | mean y: 2383833.0789473685
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | intersect: 2383833.0789473685
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | chi2: 0.04642711436917994
[2026-04-15 16:13:34] 2026-04-15 20:13:21,706 | INFO     | current chi2=0.04642711436917994 (change=96.46325622108489 %)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | sum of square deviations: 401533110.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | sum of deviations: -1136885670.0000005
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | mean y: 2377515.981651376
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | intersect: 2377515.981651376
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | chi2: 0.033810597007948744
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | current chi2=0.033810597007948744 (change=27.17489021804576 %)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,707 | INFO     | sum of square deviations: 348769330.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | sum of deviations: 1565057937.5
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | mean y: 2369700.855769231
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | intersect: 2369700.855769231
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | chi2: 0.009022380071472373
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | current chi2=0.009022380071472373 (change=73.31493416294529 %)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,708 | INFO     | sum of square deviations: 300842850.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | sum of deviations: 1759247137.0000002
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | mean y: 2369163.909090909
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | intersect: 2369163.909090909
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | chi2: 0.0016719061753353915
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | current chi2=0.0016719061753353915 (change=81.46934442917399 %)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | sum of square deviations: 257521107.5
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | sum of deviations: 1371197070.4999995
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | mean y: 2370527.2021276597
[2026-04-15 16:13:34] 2026-04-15 20:13:21,709 | INFO     | intersect: 2370527.2021276597
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | chi2: 0.0015753170661106776
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | current chi2=0.0015753170661106776 (change=5.777184787617506 %)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | left removable region: 25
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | sum of square deviations: 211285822.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | sum of deviations: 1183971783.5
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | mean x (centered): 0.0
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | mean y: 2369785.4886363638
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | intersect: 2369785.4886363638
[2026-04-15 16:13:34] 2026-04-15 20:13:21,710 | INFO     | chi2: 0.001558590022550485
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | current memory leak: 5.60 B/s (using 88 data points, chi2=0.00)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | could have reported an average CPU frequency of 3167 MHz (8 samples)
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | ..............................
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . Timing measurements:
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . get job = 0 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . initial setup = 4 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . payload setup = 4 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . stage-in = 0 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . payload execution = 7241 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . stage-out = 0 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | . log creation = 0 s
[2026-04-15 16:13:34] 2026-04-15 20:13:21,711 | INFO     | ..............................
[2026-04-15 16:13:34] 2026-04-15 20:13:22,086 | INFO     | 7269s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | 
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | job summary report
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | --------------------------------------------------
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | PanDA job id: 7092143296
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | task id: 49545114
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | errors: (none)
[2026-04-15 16:13:34] 2026-04-15 20:13:22,164 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | pilot state: finished 
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | transexitcode: 0
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | exeerrorcode: 0
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | exeerrordiag: 
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | exitcode: 0
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | exitmsg: OK
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | cpuconsumptiontime: 28213 s
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | nevents: 400
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | neventsw: 0
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | pid: 3790984
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | pgrp: 3790984
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | corecount: 4
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | event service: False
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | sizes: {0: 2281586, 11: 2281586, 7249: 2309051, 7250: 2318077, 7253: 2318327}
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | --------------------------------------------------
[2026-04-15 16:13:34] 2026-04-15 20:13:22,165 | INFO     | 
[2026-04-15 16:13:34] 2026-04-15 20:13:22,166 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-04-15 16:13:34] 2026-04-15 20:13:22,178 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,178 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,178 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,180 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-15 16:13:34] 2026-04-15 20:13:22,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,180 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-15 16:13:34] 2026-04-15 20:13:22,180 | INFO     | job 7092143296 has completed (purged errors)
[2026-04-15 16:13:34] 2026-04-15 20:13:22,180 | INFO     | overall cleanup function is called
[2026-04-15 16:13:34] 2026-04-15 20:13:23,187 | INFO     | --- collectZombieJob: --- 10, [3790984]
[2026-04-15 16:13:34] 2026-04-15 20:13:23,187 | INFO     | zombie collector waiting for pid 3790984
[2026-04-15 16:13:34] 2026-04-15 20:13:23,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-15 16:13:34] 2026-04-15 20:13:23,187 | INFO     | collected zombie processes
[2026-04-15 16:13:34] 2026-04-15 20:13:23,187 | INFO     | will attempt to kill all subprocesses of pid=3790984
[2026-04-15 16:13:34] 2026-04-15 20:13:23,319 | INFO     | process IDs to be killed: [3790984] (in reverse order)
[2026-04-15 16:13:34] 2026-04-15 20:13:23,345 | WARNING  | found no corresponding commands to process id(s)
[2026-04-15 16:13:34] 2026-04-15 20:13:23,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-15 16:13:34] 2026-04-15 20:13:23,348 | INFO     | did not find any defunct processes belonging to 3790984
[2026-04-15 16:13:34] 2026-04-15 20:13:23,350 | INFO     | did not find any defunct processes belonging to 3790984
[2026-04-15 16:13:34] 2026-04-15 20:13:23,350 | INFO     | Ready for new job
[2026-04-15 16:13:34] 2026-04-15 20:13:23,351 | INFO     | **************************************
[2026-04-15 16:13:34] 2026-04-15 20:13:23,351 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-15 16:13:34] 2026-04-15 20:13:23,351 | INFO     | **************************************
[2026-04-15 16:13:34] 2026-04-15 20:13:23,351 | INFO     | 
[2026-04-15 16:13:34] 2026-04-15 20:13:23,352 | INFO     | architecture information:
[2026-04-15 16:13:34] 2026-04-15 20:13:23,353 | INFO     | executing command: cat /etc/os-release
[2026-04-15 16:13:34] 2026-04-15 20:13:23,358 | INFO     | cat /etc/os-release:
[2026-04-15 16:13:34] NAME="CentOS Linux"
[2026-04-15 16:13:34] VERSION="7 (Core)"
[2026-04-15 16:13:34] ID="centos"
[2026-04-15 16:13:34] ID_LIKE="rhel fedora"
[2026-04-15 16:13:34] VERSION_ID="7"
[2026-04-15 16:13:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-15 16:13:34] ANSI_COLOR="0;31"
[2026-04-15 16:13:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-15 16:13:34] HOME_URL="https://www.centos.org/"
[2026-04-15 16:13:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-15 16:13:34] 
[2026-04-15 16:13:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-15 16:13:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-15 16:13:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-15 16:13:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-15 16:13:34] 
[2026-04-15 16:13:34] 2026-04-15 20:13:23,358 | INFO     | **************************************
[2026-04-15 16:13:34] 2026-04-15 20:13:23,861 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-04-15 16:13:34] 2026-04-15 20:13:23,869 | INFO     | sufficient remaining disk space (402019844096 B)
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | INFO     | current server update state: UPDATING_FINAL
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | INFO     | update_server=False
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-15 16:13:34] 2026-04-15 20:13:23,870 | INFO     | aborting loop
[2026-04-15 16:13:34] 2026-04-15 20:13:23,871 | INFO     | found 0 job(s) in 20 queues
[2026-04-15 16:13:34] 2026-04-15 20:13:23,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-15 16:13:34] 2026-04-15 20:13:23,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-15 16:13:34] 2026-04-15 20:13:23,894 | INFO     | all job control threads have been joined
[2026-04-15 16:13:34] 2026-04-15 20:13:24,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-15 16:13:34] 2026-04-15 20:13:24,532 | INFO     | all data control threads have been joined
[2026-04-15 16:13:34] 2026-04-15 20:13:24,787 | INFO     | all payload control threads have been joined
[2026-04-15 16:13:34] 2026-04-15 20:13:24,875 | INFO     | [job] retrieve thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:24,876 | INFO     | [job] job monitor thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:24,900 | INFO     | [job] control thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:24,926 | INFO     | [job] create_data_payload thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:24,954 | INFO     | [data] copytool_in thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:25,417 | INFO     | [payload] validate_pre thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:25,417 | INFO     | [payload] execute_payloads thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:25,537 | INFO     | [data] control thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:25,792 | INFO     | [payload] control thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:25,889 | INFO     | [payload] failed_post thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:26,138 | INFO     | [job] validate thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:26,198 | INFO     | [data] copytool_out thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:26,202 | INFO     | [payload] validate_post thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:26,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:26,331 | INFO     | [monitor] cgroup control has ended
[2026-04-15 16:13:34] 2026-04-15 20:13:26,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-15 16:13:34] 2026-04-15 20:13:27,775 | INFO     | [job] queue monitor thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:27,876 | INFO     | [data] queue_monitor thread has finished
[2026-04-15 16:13:34] 2026-04-15 20:13:29,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127876598900544)>', '<ExcThread(monitor, started 127876242323200)>']
[2026-04-15 16:13:34] 2026-04-15 20:13:29,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-15 16:13:34] 2026-04-15 20:13:29,902 | INFO     | [monitor] control thread has ended
[2026-04-15 16:13:34] 2026-04-15 20:13:34,657 | INFO     | all workflow threads have been joined
[2026-04-15 16:13:34] 2026-04-15 20:13:34,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-15 16:13:34] 2026-04-15 20:13:34,657 | INFO     | traces error code: 0
[2026-04-15 16:13:34] 2026-04-15 20:13:34,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-15 16:13:34] 2026-04-15 20:13:34,728 [wrapper] ==== pilot stdout END ====
[2026-04-15 16:13:34] 2026-04-15 20:13:34,730 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-15 16:13:34] 2026-04-15 20:13:34,731 [wrapper] pilotpid: 3786325
[2026-04-15 16:13:34] 2026-04-15 20:13:34,733 [wrapper] Pilot exit status: 0
[2026-04-15 16:13:34] 2026-04-15 20:13:34,738 [wrapper] pandaids: 7092143296
[2026-04-15 16:13:34] 2026-04-15 20:13:34,757 [wrapper] cleanup supervisor_pilot 3818190 3786326
[2026-04-15 16:13:34] 2026-04-15 20:13:34,758 [wrapper] Test setup, not cleaning
[2026-04-15 16:13:34] 2026-04-15 20:13:34,760 [wrapper] apfmon messages muted
[2026-04-15 16:13:34] 2026-04-15 20:13:34,761 [wrapper] ==== wrapper stdout END ====
[2026-04-15 16:13:34] 2026-04-15 20:13:34,763 [wrapper] ==== wrapper stderr END ====
[2026-04-15 16:13:34]  *** Error codes and diagnostics ***
[2026-04-15 16:13:34]     "exeErrorCode": 0,
[2026-04-15 16:13:34]     "pilotErrorCode": 0,
[2026-04-15 16:13:34]  *** Listing of results directory ***
[2026-04-15 16:13:34] total 460908
[2026-04-15 16:13:34] -rwx------ 1 whitlerd whitlerd     36322 Apr 13 16:21 runpilot2-wrapper.sh
[2026-04-15 16:13:34] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr 15 08:37 pilot3.tar.gz
[2026-04-15 16:13:34] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr 15 08:44 queuedata.json
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 15 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-15 16:13:34] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 15 14:11 run_atlas
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 15 14:11 job.xml
[2026-04-15 16:13:34] -rw-r--r-- 2 whitlerd whitlerd 281407150 Apr 15 14:11 EVNT.49539591._000022.pool.root.1
[2026-04-15 16:13:34] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 15 14:11 start_atlas.sh
[2026-04-15 16:13:34] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 15 14:11 shared
[2026-04-15 16:13:34] -rw-r--r-- 2 whitlerd whitlerd    656936 Apr 15 14:11 input.tar.gz
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd      9006 Apr 15 14:11 init_data.xml
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 15 14:11 boinc_setup_complete
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 15 14:11 boinc_lockfile
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd      2601 Apr 15 14:11 pandaJob.out
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd    997164 Apr 15 14:12 agis_schedconf.cvmfs.json
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd   1511633 Apr 15 14:12 agis_ddmendpoints.agis.ALL.json
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd       434 Apr 15 14:12 workernode_map.json
[2026-04-15 16:13:34] drwx------ 5 whitlerd whitlerd      4096 Apr 15 14:12 pilot3
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd 184568752 Apr 15 16:12 HITS.49545114._000479.pool.root.1
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd       487 Apr 15 16:12 boinc_task_state.xml
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd      1023 Apr 15 16:13 memory_monitor_summary.json
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd        95 Apr 15 16:13 pilot_heartbeat.json
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd    257726 Apr 15 16:13 log.49545114._000479.job.log.tgz.1
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd      6343 Apr 15 16:13 heartbeat_new.json
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd      6234 Apr 15 16:13 heartbeat.json
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr 15 16:13 wrapper_checkpoint.txt
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 15 16:13 boinc_mmap_file
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd      4562 Apr 15 16:13 pilotlog.txt
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd    710969 Apr 15 16:13 log.49545114._000479.job.log.1
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd       357 Apr 15 16:13 output.list
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 15 16:13 runtime_log
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd    983040 Apr 15 16:13 result.tar.gz
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd      8641 Apr 15 16:13 runtime_log.err
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd       646 Apr 15 16:13 50333510ab1d.diag
[2026-04-15 16:13:34] -rw-rw-r-- 1 whitlerd whitlerd     20789 Apr 15 16:13 stderr.txt
[2026-04-15 16:13:34] HITS file was successfully produced:
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd 184568752 Apr 15 16:12 shared/HITS.pool.root.1
[2026-04-15 16:13:34]  *** Contents of shared directory: ***
[2026-04-15 16:13:34] total 456684
[2026-04-15 16:13:34] -rw-r--r-- 2 whitlerd whitlerd 281407150 Apr 15 14:11 ATLAS.root_0
[2026-04-15 16:13:34] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 15 14:11 start_atlas.sh
[2026-04-15 16:13:34] -rw-r--r-- 2 whitlerd whitlerd    656936 Apr 15 14:11 input.tar.gz
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd 184568752 Apr 15 16:12 HITS.pool.root.1
[2026-04-15 16:13:34] -rw------- 1 whitlerd whitlerd    983040 Apr 15 16:13 result.tar.gz
16:13:36 (3781996): run_atlas exited; CPU time 28318.205843
16:13:36 (3781996): called boinc_finish(0)

</stderr_txt>
]]>

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