Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:18 (3481378): wrapper (7.7.26015): starting
10:22:18 (3481378): wrapper: running run_atlas (--nthreads 11)
[2026-04-15 10:22:18] Arguments: --nthreads 11
[2026-04-15 10:22:18] Threads: 11
[2026-04-15 10:22:18] Checking for CVMFS
[2026-04-15 10:22:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-15 10:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-15 10:22:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-15 10:22:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-15 10:22:19] 2.13.3.0 11035 134233 898300 158496 2 879 28380963 32935936 59578 16776704 0 1066857722 99.777 652653954 27402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-15 10:22:19] CVMFS is ok
[2026-04-15 10:22:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-15 10:22:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-15 10:22:19] Further information can be found at the LHC@home message board.
[2026-04-15 10:22:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-15 10:22:19] Checking for apptainer binary...
[2026-04-15 10:22:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-15 10:22:19] Running /usr/bin/apptainer --version
[2026-04-15 10:22:20] apptainer version 1.4.5-2.el9
[2026-04-15 10:22:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-15 10:22:20] lc-10-9.aglt2.org
[2026-04-15 10:22:20] apptainer works
[2026-04-15 10:22:20] Set ATHENA_PROC_NUMBER=11
[2026-04-15 10:22:20] Set ATHENA_CORE_NUMBER=11
[2026-04-15 10:22:20] Starting ATLAS job with PandaID=7092144035
[2026-04-15 10:22:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-15 13:27:07]  *** The last 200 lines of the pilot log: ***
[2026-04-15 13:27:07] 2026-04-15 17:26:30,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,126 | INFO     | log transfer has been attempted: DONE
[2026-04-15 13:27:07] 2026-04-15 17:26:30,126 | INFO     | job 7092144035 has finished - writing final server update
[2026-04-15 13:27:07] 2026-04-15 17:26:30,126 | INFO     | total number of processed events: 400 (read)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,201 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7092144035/memory_monitor_summary.json (trf name=prmon)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,202 | INFO     | extracted standard info from prmon json
[2026-04-15 13:27:07] 2026-04-15 17:26:30,202 | INFO     | extracted standard memory fields from prmon json
[2026-04-15 13:27:07] 2026-04-15 17:26:30,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-15 13:27:07] 2026-04-15 17:26:30,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-15 13:27:07] 2026-04-15 17:26:30,225 | INFO     | fitting pss+swap vs Time
[2026-04-15 13:27:07] 2026-04-15 17:26:30,225 | INFO     | sum of square deviations: 1778546448.8379855
[2026-04-15 13:27:07] 2026-04-15 17:26:30,226 | INFO     | sum of deviations: 38101271904.41334
[2026-04-15 13:27:07] 2026-04-15 17:26:30,247 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,247 | INFO     | mean y: 2704662.0223463685
[2026-04-15 13:27:07] 2026-04-15 17:26:30,247 | INFO     | intersect: 2704662.0223463685
[2026-04-15 13:27:07] 2026-04-15 17:26:30,247 | INFO     | chi2: 3.128116262098549
[2026-04-15 13:27:07] 2026-04-15 17:26:30,248 | INFO     | sum of square deviations: 1633663060.5287323
[2026-04-15 13:27:07] 2026-04-15 17:26:30,249 | INFO     | sum of deviations: 50120739690.45972
[2026-04-15 13:27:07] 2026-04-15 17:26:30,249 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,249 | INFO     | mean y: 2716990.028735632
[2026-04-15 13:27:07] 2026-04-15 17:26:30,249 | INFO     | intersect: 2716990.028735632
[2026-04-15 13:27:07] 2026-04-15 17:26:30,249 | INFO     | chi2: 2.316591561639245
[2026-04-15 13:27:07] 2026-04-15 17:26:30,249 | INFO     | current chi2=2.316591561639245 (change=25.94292003440048 %)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,250 | INFO     | sum of square deviations: 1496819408.2248552
[2026-04-15 13:27:07] 2026-04-15 17:26:30,271 | INFO     | sum of deviations: 48412377118.33726
[2026-04-15 13:27:07] 2026-04-15 17:26:30,271 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,271 | INFO     | mean y: 2715085.5857988168
[2026-04-15 13:27:07] 2026-04-15 17:26:30,271 | INFO     | intersect: 2715085.5857988168
[2026-04-15 13:27:07] 2026-04-15 17:26:30,271 | INFO     | chi2: 2.318459282931066
[2026-04-15 13:27:07] 2026-04-15 17:26:30,272 | INFO     | current chi2=2.318459282931066 (change=-0.08062367673044439 %)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,272 | INFO     | right removable region: 168
[2026-04-15 13:27:07] 2026-04-15 17:26:30,272 | INFO     | sum of square deviations: 1633619750.5287323
[2026-04-15 13:27:07] 2026-04-15 17:26:30,273 | INFO     | sum of deviations: -5240758278.206897
[2026-04-15 13:27:07] 2026-04-15 17:26:30,273 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,273 | INFO     | mean y: 2749930.8620689656
[2026-04-15 13:27:07] 2026-04-15 17:26:30,273 | INFO     | intersect: 2749930.8620689656
[2026-04-15 13:27:07] 2026-04-15 17:26:30,274 | INFO     | chi2: 0.9331727716482887
[2026-04-15 13:27:07] 2026-04-15 17:26:30,274 | INFO     | current chi2=0.9331727716482887 (change=70.16821967409057 %)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,274 | INFO     | sum of square deviations: 1496807332.8284092
[2026-04-15 13:27:07] 2026-04-15 17:26:30,279 | INFO     | sum of deviations: -12171208197.71006
[2026-04-15 13:27:07] 2026-04-15 17:26:30,284 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,284 | INFO     | mean y: 2757549.7928994084
[2026-04-15 13:27:07] 2026-04-15 17:26:30,285 | INFO     | intersect: 2757549.7928994084
[2026-04-15 13:27:07] 2026-04-15 17:26:30,285 | INFO     | chi2: 0.8506171435817341
[2026-04-15 13:27:07] 2026-04-15 17:26:30,285 | INFO     | current chi2=0.8506171435817341 (change=8.846767777068154 %)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,285 | INFO     | left removable region: 10
[2026-04-15 13:27:07] 2026-04-15 17:26:30,285 | INFO     | sum of square deviations: 1223158735.5759463
[2026-04-15 13:27:07] 2026-04-15 17:26:30,286 | INFO     | sum of deviations: 285846052.132911
[2026-04-15 13:27:07] 2026-04-15 17:26:30,286 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,286 | INFO     | mean y: 2771899.2088607596
[2026-04-15 13:27:07] 2026-04-15 17:26:30,287 | INFO     | intersect: 2771899.2088607596
[2026-04-15 13:27:07] 2026-04-15 17:26:30,287 | INFO     | chi2: 0.002670464349214543
[2026-04-15 13:27:07] 2026-04-15 17:26:30,287 | INFO     | current memory leak: 0.23 B/s (using 158 data points, chi2=0.00)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | could have reported an average CPU frequency of 2743 MHz (10 samples)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | ..............................
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . Timing measurements:
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . get job = 0 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . initial setup = 26 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . payload setup = 50 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . stage-in = 0 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . payload execution = 10905 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,292 | INFO     | . stage-out = 4 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,293 | INFO     | . log creation = 1 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,293 | INFO     | ..............................
[2026-04-15 13:27:07] 2026-04-15 17:26:30,653 | INFO     | 
[2026-04-15 13:27:07] 2026-04-15 17:26:30,653 | INFO     | job summary report
[2026-04-15 13:27:07] 2026-04-15 17:26:30,653 | INFO     | --------------------------------------------------
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | PanDA job id: 7092144035
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | task id: 49545114
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | errors: (none)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | pilot state: finished 
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | transexitcode: 0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | exeerrorcode: 0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | exeerrordiag: 
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | exitcode: 0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | exitmsg: OK
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | cpuconsumptiontime: 41178 s
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | nevents: 400
[2026-04-15 13:27:07] 2026-04-15 17:26:30,654 | INFO     | neventsw: 0
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | pid: 3514993
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | pgrp: 3514993
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | corecount: 11
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | event service: False
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | sizes: {0: 2279802, 1: 2281603, 2: 2281603, 10960: 2310620, 10961: 2310619, 10966: 2319673, 10968: 2319857, 10970: 2320051}
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | --------------------------------------------------
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | 
[2026-04-15 13:27:07] 2026-04-15 17:26:30,655 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,734 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-15 13:27:07] 2026-04-15 17:26:30,734 | INFO     | job 7092144035 has completed (purged errors)
[2026-04-15 13:27:07] 2026-04-15 17:26:30,734 | INFO     | overall cleanup function is called
[2026-04-15 13:27:07] 2026-04-15 17:26:31,240 | INFO     | PID=3502750 has CPU usage=21.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-15 13:27:07] 2026-04-15 17:26:31,240 | INFO     | .. there are 87 such processes running
[2026-04-15 13:27:07] 2026-04-15 17:26:31,767 | INFO     | --- collectZombieJob: --- 10, [3514993]
[2026-04-15 13:27:07] 2026-04-15 17:26:31,768 | INFO     | zombie collector waiting for pid 3514993
[2026-04-15 13:27:07] 2026-04-15 17:26:31,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-15 13:27:07] 2026-04-15 17:26:31,768 | INFO     | collected zombie processes
[2026-04-15 13:27:07] 2026-04-15 17:26:31,768 | INFO     | will attempt to kill all subprocesses of pid=3514993
[2026-04-15 13:27:07] 2026-04-15 17:26:33,659 | INFO     | process IDs to be killed: [3514993] (in reverse order)
[2026-04-15 13:27:07] 2026-04-15 17:26:34,169 | WARNING  | found no corresponding commands to process id(s)
[2026-04-15 13:27:07] 2026-04-15 17:26:34,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-15 13:27:07] 2026-04-15 17:26:34,231 | INFO     | did not find any defunct processes belonging to 3514993
[2026-04-15 13:27:07] 2026-04-15 17:26:34,290 | INFO     | did not find any defunct processes belonging to 3514993
[2026-04-15 13:27:07] 2026-04-15 17:26:34,295 | INFO     | Ready for new job
[2026-04-15 13:27:07] 2026-04-15 17:26:34,296 | INFO     | **************************************
[2026-04-15 13:27:07] 2026-04-15 17:26:34,297 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-15 13:27:07] 2026-04-15 17:26:34,297 | INFO     | **************************************
[2026-04-15 13:27:07] 2026-04-15 17:26:34,297 | INFO     | 
[2026-04-15 13:27:07] 2026-04-15 17:26:34,306 | INFO     | architecture information:
[2026-04-15 13:27:07] 2026-04-15 17:26:34,311 | INFO     | executing command: cat /etc/os-release
[2026-04-15 13:27:07] 2026-04-15 17:26:34,369 | INFO     | cat /etc/os-release:
[2026-04-15 13:27:07] NAME="CentOS Linux"
[2026-04-15 13:27:07] VERSION="7 (Core)"
[2026-04-15 13:27:07] ID="centos"
[2026-04-15 13:27:07] ID_LIKE="rhel fedora"
[2026-04-15 13:27:07] VERSION_ID="7"
[2026-04-15 13:27:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-15 13:27:07] ANSI_COLOR="0;31"
[2026-04-15 13:27:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-15 13:27:07] HOME_URL="https://www.centos.org/"
[2026-04-15 13:27:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-15 13:27:07] 
[2026-04-15 13:27:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-15 13:27:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-15 13:27:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-15 13:27:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-15 13:27:07] 
[2026-04-15 13:27:07] 2026-04-15 17:26:34,369 | INFO     | **************************************
[2026-04-15 13:27:07] 2026-04-15 17:26:34,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-15 13:27:07] 2026-04-15 17:26:34,933 | INFO     | sufficient remaining disk space (93740597248 B)
[2026-04-15 13:27:07] 2026-04-15 17:26:34,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-15 13:27:07] 2026-04-15 17:26:34,933 | INFO     | current server update state: UPDATING_FINAL
[2026-04-15 13:27:07] 2026-04-15 17:26:34,933 | INFO     | update_server=False
[2026-04-15 13:27:07] 2026-04-15 17:26:34,933 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-15 13:27:07] 2026-04-15 17:26:34,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-15 13:27:07] 2026-04-15 17:26:34,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-15 13:27:07] 2026-04-15 17:26:34,945 | INFO     | aborting loop
[2026-04-15 13:27:07] 2026-04-15 17:26:34,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-15 13:27:07] 2026-04-15 17:26:35,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-15 13:27:07] 2026-04-15 17:26:35,773 | INFO     | all data control threads have been joined
[2026-04-15 13:27:07] 2026-04-15 17:26:35,838 | INFO     | all payload control threads have been joined
[2026-04-15 13:27:07] 2026-04-15 17:26:35,945 | INFO     | [job] retrieve thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:35,955 | INFO     | [job] job monitor thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,015 | INFO     | all job control threads have been joined
[2026-04-15 13:27:07] 2026-04-15 17:26:36,050 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,270 | INFO     | [payload] failed_post thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,620 | INFO     | [payload] execute_payloads thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,714 | INFO     | [job] queue monitor thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,738 | INFO     | [payload] validate_post thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,780 | INFO     | [job] validate thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,783 | INFO     | [data] control thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,844 | INFO     | [payload] control thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:36,957 | INFO     | [data] copytool_out thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:37,021 | INFO     | [job] control thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:37,059 | INFO     | [payload] validate_pre thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:37,324 | INFO     | [job] create_data_payload thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:37,356 | INFO     | [data] copytool_in thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:38,944 | INFO     | [data] queue_monitor thread has finished
[2026-04-15 13:27:07] 2026-04-15 17:26:57,262 | INFO     | [monitor] cgroup control has ended
[2026-04-15 13:27:07] 2026-04-15 17:26:58,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093560477504)>', '<ExcThread(monitor, started 140093218080512)>']
[2026-04-15 13:27:07] 2026-04-15 17:27:03,297 | INFO     | all workflow threads have been joined
[2026-04-15 13:27:07] 2026-04-15 17:27:03,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-15 13:27:07] 2026-04-15 17:27:03,301 | INFO     | traces error code: 0
[2026-04-15 13:27:07] 2026-04-15 17:27:03,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-15 13:27:07] 2026-04-15 17:27:05,900 | INFO     | PID=3502750 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-15 13:27:07] 2026-04-15 17:27:05,900 | INFO     | .. there are 87 such processes running
[2026-04-15 13:27:07] 2026-04-15 17:27:05,901 | INFO     | found 0 job(s) in 20 queues
[2026-04-15 13:27:07] 2026-04-15 17:27:05,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-15 13:27:07] 2026-04-15 17:27:05,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-15 13:27:07] 2026-04-15 17:27:05,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-15 13:27:07] 2026-04-15 17:27:05,901 | INFO     | [monitor] control thread has ended
[2026-04-15 13:27:07] 2026-04-15 17:27:06,109 [wrapper] ==== pilot stdout END ====
[2026-04-15 13:27:07] 2026-04-15 17:27:06,119 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-15 13:27:07] 2026-04-15 17:27:06,133 [wrapper] pilotpid: 3502750
[2026-04-15 13:27:07] 2026-04-15 17:27:06,162 [wrapper] Pilot exit status: 0
[2026-04-15 13:27:07] 2026-04-15 17:27:06,243 [wrapper] pandaids: 7092144035
[2026-04-15 13:27:07] 2026-04-15 17:27:06,626 [wrapper] cleanup supervisor_pilot  634006 3502751
[2026-04-15 13:27:07] 2026-04-15 17:27:06,682 [wrapper] Test setup, not cleaning
[2026-04-15 13:27:07] 2026-04-15 17:27:06,722 [wrapper] apfmon messages muted
[2026-04-15 13:27:07] 2026-04-15 17:27:06,746 [wrapper] ==== wrapper stdout END ====
[2026-04-15 13:27:07] 2026-04-15 17:27:06,759 [wrapper] ==== wrapper stderr END ====
[2026-04-15 13:27:07]  *** Error codes and diagnostics ***
[2026-04-15 13:27:07]     "exeErrorCode": 0,
[2026-04-15 13:27:07]     "pilotErrorCode": 0,
[2026-04-15 13:27:07]  *** Listing of results directory ***
[2026-04-15 13:27:07] total 455496
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 15:41 pilot3.tar.gz
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 16:18 queuedata.json
[2026-04-15 13:27:07] -rwx------. 1 boincer umatlas     36322 Apr 13 16:18 runpilot2-wrapper.sh
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas       100 Apr 15 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-15 13:27:07] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 15 10:22 run_atlas
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas       105 Apr 15 10:22 job.xml
[2026-04-15 13:27:07] -rw-r--r--. 2 boincer umatlas 278641208 Apr 15 10:22 EVNT.49539591._000045.pool.root.1
[2026-04-15 13:27:07] -rw-r--r--. 2 boincer umatlas     15665 Apr 15 10:22 start_atlas.sh
[2026-04-15 13:27:07] drwxrwx--x. 2 boincer umatlas      4096 Apr 15 10:22 shared
[2026-04-15 13:27:07] -rw-r--r--. 2 boincer umatlas    656929 Apr 15 10:22 input.tar.gz
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas         0 Apr 15 10:22 boinc_lockfile
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas      2602 Apr 15 10:22 pandaJob.out
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas        57 Apr 15 10:22 setup.sh.local
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas    997164 Apr 15 10:23 agis_schedconf.cvmfs.json
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas       440 Apr 15 10:23 workernode_map.json
[2026-04-15 13:27:07] drwx------. 5 boincer umatlas      4096 Apr 15 10:23 pilot3
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas      6781 Apr 15 13:18 init_data.xml
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas 181247452 Apr 15 13:25 HITS.49545114._001073.pool.root.1
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas       489 Apr 15 13:25 boinc_task_state.xml
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas      1044 Apr 15 13:26 memory_monitor_summary.json
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas        95 Apr 15 13:26 pilot_heartbeat.json
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas   1511633 Apr 15 13:26 agis_ddmendpoints.agis.ALL.json
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas    409374 Apr 15 13:26 log.49545114._001073.job.log.tgz.1
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas      6403 Apr 15 13:26 heartbeat_new.json
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas      6294 Apr 15 13:26 heartbeat.json
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas        28 Apr 15 13:27 wrapper_checkpoint.txt
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas      8192 Apr 15 13:27 boinc_mmap_file
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas       823 Apr 15 13:27 pilotlog.txt
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas    830451 Apr 15 13:27 log.49545114._001073.job.log.1
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas       357 Apr 15 13:27 output.list
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas       410 Apr 15 13:27 runtime_log
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas   1259520 Apr 15 13:27 result.tar.gz
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas      8961 Apr 15 13:27 runtime_log.err
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas       652 Apr 15 13:27 4f9667881f48.diag
[2026-04-15 13:27:07] -rw-r--r--. 1 boincer umatlas     21155 Apr 15 13:27 stderr.txt
[2026-04-15 13:27:07] HITS file was successfully produced:
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas 181247452 Apr 15 13:25 shared/HITS.pool.root.1
[2026-04-15 13:27:07]  *** Contents of shared directory: ***
[2026-04-15 13:27:07] total 451012
[2026-04-15 13:27:07] -rw-r--r--. 2 boincer umatlas 278641208 Apr 15 10:22 ATLAS.root_0
[2026-04-15 13:27:07] -rw-r--r--. 2 boincer umatlas     15665 Apr 15 10:22 start_atlas.sh
[2026-04-15 13:27:07] -rw-r--r--. 2 boincer umatlas    656929 Apr 15 10:22 input.tar.gz
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas 181247452 Apr 15 13:25 HITS.pool.root.1
[2026-04-15 13:27:07] -rw-------. 1 boincer umatlas   1259520 Apr 15 13:27 result.tar.gz
13:27:29 (3481378): run_atlas exited; CPU time 41904.119440
13:27:29 (3481378): called boinc_finish(0)

</stderr_txt>
]]>

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