Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:58:40 (444231): wrapper (7.7.26015): starting
13:58:40 (444231): wrapper: running run_atlas (--nthreads 4)
[2026-04-14 13:58:40] Arguments: --nthreads 4
[2026-04-14 13:58:40] Threads: 4
[2026-04-14 13:58:40] Checking for CVMFS
[2026-04-14 13:58:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 13:58:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 13:58:42] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 13:58:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 13:58:42] 2.13.3.0 444441 0 25524 158465 3 1 2165631 4096001 0 130560 0 0 0.000 1337 3342 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-14 13:58:42] CVMFS is ok
[2026-04-14 13:58:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 13:58:42] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-14 13:58:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-14 13:58:42] Further information can be found at the LHC@home message board.
[2026-04-14 13:58:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 13:58:42] Checking for apptainer binary...
[2026-04-14 13:58:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 13:58:42] Running /usr/bin/apptainer --version
[2026-04-14 13:58:43] apptainer version 1.4.5
[2026-04-14 13:58:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 13:58:43] Taichi-Ubuntu
[2026-04-14 13:58:43] apptainer works
[2026-04-14 13:58:43] Set ATHENA_PROC_NUMBER=4
[2026-04-14 13:58:43] Set ATHENA_CORE_NUMBER=4
[2026-04-14 13:58:43] Starting ATLAS job with PandaID=7088252928
[2026-04-14 13:58:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 16:08:19]  *** The last 200 lines of the pilot log: ***
[2026-04-14 16:08:19] 2026-04-14 20:07:22,092 | INFO     | total size of present files: 0 B (workdir size: 2401097 B)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,093 | INFO     | output file size check: skipping output file /home/whitlerd/Desktop/BOINC/slots/16/PanDA_Pilot-7088252928/HITS.49645815._008780.pool.root.1 since it does not exist
[2026-04-14 16:08:19] 2026-04-14 20:07:22,253 | INFO     | number of running child processes to parent process 453353: 1
[2026-04-14 16:08:19] 2026-04-14 20:07:22,253 | INFO     | maximum number of monitored processes: 6
[2026-04-14 16:08:19] 2026-04-14 20:07:22,943 | INFO     | job 7088252928 has state=finished
[2026-04-14 16:08:19] 2026-04-14 20:07:22,944 | INFO     | preparing for final server update for job 7088252928 in state='finished'
[2026-04-14 16:08:19] 2026-04-14 20:07:22,944 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/16/PanDA_Pilot-7088252928/jobReport.json
[2026-04-14 16:08:19] 2026-04-14 20:07:22,946 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/16/workernode_map.json
[2026-04-14 16:08:19] 2026-04-14 20:07:22,946 | INFO     | this job has now completed (state=finished)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,946 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,946 | INFO     | log transfer has been attempted: DONE
[2026-04-14 16:08:19] 2026-04-14 20:07:22,946 | INFO     | job 7088252928 has finished - writing final server update
[2026-04-14 16:08:19] 2026-04-14 20:07:22,946 | INFO     | total number of processed events: 400 (read)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,952 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/16/PanDA_Pilot-7088252928/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,952 | INFO     | extracted standard info from prmon json
[2026-04-14 16:08:19] 2026-04-14 20:07:22,952 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 16:08:19] 2026-04-14 20:07:22,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 16:08:19] 2026-04-14 20:07:22,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 16:08:19] 2026-04-14 20:07:22,954 | INFO     | fitting pss+swap vs Time
[2026-04-14 16:08:19] 2026-04-14 20:07:22,954 | INFO     | sum of square deviations: 620244187.5
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | sum of deviations: -20987969818.999996
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | mean x (centered): 0.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | mean y: 2438959.285714286
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | intersect: 2438959.285714286
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | chi2: 1.5648376053526862
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | sum of square deviations: 549294020.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | sum of deviations: -19739052769.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,955 | INFO     | mean x (centered): 0.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | mean y: 2441645.1487603304
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | intersect: 2441645.1487603304
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | chi2: 1.555651444151098
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | current chi2=1.555651444151098 (change=0.5870360713575656 %)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | right removable region: 120
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | sum of square deviations: 549294020.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | sum of deviations: -33439211372.999996
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | mean x (centered): 0.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | mean y: 2464886.6363636362
[2026-04-14 16:08:19] 2026-04-14 20:07:22,956 | INFO     | intersect: 2464886.6363636362
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | chi2: 0.2828186033508057
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | current chi2=0.2828186033508057 (change=81.92664833824315 %)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | sum of square deviations: 483971865.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | sum of deviations: -28284374653.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | mean x (centered): 0.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | mean y: 2452834.8620689656
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | intersect: 2452834.8620689656
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | chi2: 0.2788751519494306
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | current chi2=0.2788751519494306 (change=1.3943394651743328 %)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,957 | INFO     | left removable region: 10
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | sum of square deviations: 412686807.5
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | sum of deviations: -26609760075.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | mean x (centered): 0.0
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | mean y: 2457137.8727272726
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | intersect: 2457137.8727272726
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | chi2: 0.26254872191807255
[2026-04-14 16:08:19] 2026-04-14 20:07:22,958 | INFO     | current memory leak: -64.48 B/s (using 110 data points, chi2=0.26)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | could have reported an average CPU frequency of 3250 MHz (8 samples)
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | ..............................
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . Timing measurements:
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . get job = 0 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . initial setup = 6 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . payload setup = 8 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . stage-in = 0 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . payload execution = 7671 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . stage-out = 0 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | . log creation = 0 s
[2026-04-14 16:08:19] 2026-04-14 20:07:22,959 | INFO     | ..............................
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | 
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | job summary report
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | --------------------------------------------------
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | PanDA job id: 7088252928
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | task id: 49645815
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | errors: (none)
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 16:08:19] 2026-04-14 20:07:23,019 | INFO     | pilot state: finished 
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | transexitcode: 0
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | exeerrorcode: 0
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | exeerrordiag: 
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | exitcode: 0
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | exitmsg: OK
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | cpuconsumptiontime: 29727 s
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | nevents: 400
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | neventsw: 0
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | pid: 453353
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | pgrp: 453353
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | corecount: 4
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | event service: False
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | sizes: {0: 2281579, 11: 2281579, 7682: 2309177, 7684: 2318205, 7686: 2318261, 7689: 2318483}
[2026-04-14 16:08:19] 2026-04-14 20:07:23,020 | INFO     | --------------------------------------------------
[2026-04-14 16:08:19] 2026-04-14 20:07:23,021 | INFO     | 
[2026-04-14 16:08:19] 2026-04-14 20:07:23,021 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/16
[2026-04-14 16:08:19] 2026-04-14 20:07:23,041 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,041 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,041 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,041 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 16:08:19] 2026-04-14 20:07:23,042 | INFO     | job 7088252928 has completed (purged errors)
[2026-04-14 16:08:19] 2026-04-14 20:07:23,043 | INFO     | overall cleanup function is called
[2026-04-14 16:08:19] 2026-04-14 20:07:24,050 | INFO     | --- collectZombieJob: --- 10, [453353]
[2026-04-14 16:08:19] 2026-04-14 20:07:24,050 | INFO     | zombie collector waiting for pid 453353
[2026-04-14 16:08:19] 2026-04-14 20:07:24,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 16:08:19] 2026-04-14 20:07:24,050 | INFO     | collected zombie processes
[2026-04-14 16:08:19] 2026-04-14 20:07:24,050 | INFO     | will attempt to kill all subprocesses of pid=453353
[2026-04-14 16:08:19] 2026-04-14 20:07:24,203 | INFO     | process IDs to be killed: [453353] (in reverse order)
[2026-04-14 16:08:19] 2026-04-14 20:07:24,263 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 16:08:19] 2026-04-14 20:07:24,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 16:08:19] 2026-04-14 20:07:24,268 | INFO     | did not find any defunct processes belonging to 453353
[2026-04-14 16:08:19] 2026-04-14 20:07:24,272 | INFO     | did not find any defunct processes belonging to 453353
[2026-04-14 16:08:19] 2026-04-14 20:07:24,272 | INFO     | Ready for new job
[2026-04-14 16:08:19] 2026-04-14 20:07:24,273 | INFO     | **************************************
[2026-04-14 16:08:19] 2026-04-14 20:07:24,273 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 16:08:19] 2026-04-14 20:07:24,273 | INFO     | **************************************
[2026-04-14 16:08:19] 2026-04-14 20:07:24,273 | INFO     | 
[2026-04-14 16:08:19] 2026-04-14 20:07:24,275 | INFO     | architecture information:
[2026-04-14 16:08:19] 2026-04-14 20:07:24,276 | INFO     | executing command: cat /etc/os-release
[2026-04-14 16:08:19] 2026-04-14 20:07:24,291 | INFO     | cat /etc/os-release:
[2026-04-14 16:08:19] NAME="CentOS Linux"
[2026-04-14 16:08:19] VERSION="7 (Core)"
[2026-04-14 16:08:19] ID="centos"
[2026-04-14 16:08:19] ID_LIKE="rhel fedora"
[2026-04-14 16:08:19] VERSION_ID="7"
[2026-04-14 16:08:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 16:08:19] ANSI_COLOR="0;31"
[2026-04-14 16:08:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 16:08:19] HOME_URL="https://www.centos.org/"
[2026-04-14 16:08:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 16:08:19] 
[2026-04-14 16:08:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 16:08:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 16:08:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 16:08:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 16:08:19] 
[2026-04-14 16:08:19] 2026-04-14 20:07:24,291 | INFO     | **************************************
[2026-04-14 16:08:19] 2026-04-14 20:07:24,794 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/16
[2026-04-14 16:08:19] 2026-04-14 20:07:24,809 | INFO     | sufficient remaining disk space (397625262080 B)
[2026-04-14 16:08:19] 2026-04-14 20:07:24,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 16:08:19] 2026-04-14 20:07:24,810 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 16:08:19] 2026-04-14 20:07:24,810 | INFO     | update_server=False
[2026-04-14 16:08:19] 2026-04-14 20:07:24,810 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 16:08:19] 2026-04-14 20:07:24,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 16:08:19] 2026-04-14 20:07:24,846 | INFO     | all job control threads have been joined
[2026-04-14 16:08:19] 2026-04-14 20:07:24,860 | INFO     | all payload control threads have been joined
[2026-04-14 16:08:19] 2026-04-14 20:07:25,075 | INFO     | all data control threads have been joined
[2026-04-14 16:08:19] 2026-04-14 20:07:25,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 16:08:19] 2026-04-14 20:07:25,762 | INFO     | aborting loop
[2026-04-14 16:08:19] 2026-04-14 20:07:25,813 | INFO     | [job] retrieve thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:25,816 | INFO     | [job] queue monitor thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:25,852 | INFO     | [job] control thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:25,866 | INFO     | [payload] control thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,081 | INFO     | [data] control thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 16:08:19] 2026-04-14 20:07:26,628 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,669 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,711 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,732 | INFO     | [job] validate thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 16:08:19] 2026-04-14 20:07:26,767 | INFO     | [job] job monitor thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,826 | INFO     | [payload] failed_post thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:26,918 | INFO     | [data] copytool_in thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:27,333 | INFO     | [payload] validate_post thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:28,227 | INFO     | [data] copytool_out thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:30,739 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:35,632 | INFO     | job.realtimelogging is not enabled
[2026-04-14 16:08:19] 2026-04-14 20:07:36,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 16:08:19] 2026-04-14 20:07:54,537 | INFO     | PID=448718 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-14 16:08:19] 2026-04-14 20:07:54,537 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 16:08:19] 2026-04-14 20:07:54,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 16:08:19] 2026-04-14 20:07:54,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 16:08:19] 2026-04-14 20:08:13,002 | INFO     | [monitor] cgroup control has ended
[2026-04-14 16:08:19] 2026-04-14 20:08:14,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135302654506816)>', '<ExcThread(monitor, started 135302299494144)>']
[2026-04-14 16:08:19] 2026-04-14 20:08:14,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 16:08:19] 2026-04-14 20:08:14,639 | INFO     | [monitor] control thread has ended
[2026-04-14 16:08:19] 2026-04-14 20:08:19,309 | INFO     | all workflow threads have been joined
[2026-04-14 16:08:19] 2026-04-14 20:08:19,309 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 16:08:19] 2026-04-14 20:08:19,310 | INFO     | traces error code: 0
[2026-04-14 16:08:19] 2026-04-14 20:08:19,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 16:08:19] 2026-04-14 20:08:19,405 [wrapper] ==== pilot stdout END ====
[2026-04-14 16:08:19] 2026-04-14 20:08:19,407 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 16:08:19] 2026-04-14 20:08:19,410 [wrapper] pilotpid: 448718
[2026-04-14 16:08:19] 2026-04-14 20:08:19,412 [wrapper] Pilot exit status: 0
[2026-04-14 16:08:19] 2026-04-14 20:08:19,425 [wrapper] pandaids: 7088252928
[2026-04-14 16:08:19] 2026-04-14 20:08:19,469 [wrapper] cleanup supervisor_pilot  462387 448719
[2026-04-14 16:08:19] 2026-04-14 20:08:19,472 [wrapper] Test setup, not cleaning
[2026-04-14 16:08:19] 2026-04-14 20:08:19,475 [wrapper] apfmon messages muted
[2026-04-14 16:08:19] 2026-04-14 20:08:19,477 [wrapper] ==== wrapper stdout END ====
[2026-04-14 16:08:19] 2026-04-14 20:08:19,479 [wrapper] ==== wrapper stderr END ====
[2026-04-14 16:08:19]  *** Error codes and diagnostics ***
[2026-04-14 16:08:19]     "exeErrorCode": 0,
[2026-04-14 16:08:19]     "pilotErrorCode": 0,
[2026-04-14 16:08:19]  *** Listing of results directory ***
[2026-04-14 16:08:19] total 413180
[2026-04-14 16:08:19] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr 12 13:39 pilot3.tar.gz
[2026-04-14 16:08:19] -rwx------ 1 whitlerd whitlerd     36322 Apr 12 13:43 runpilot2-wrapper.sh
[2026-04-14 16:08:19] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr 12 13:46 queuedata.json
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 14 13:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 16:08:19] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 14 13:58 run_atlas
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 14 13:58 job.xml
[2026-04-14 16:08:19] -rw-r--r-- 2 whitlerd whitlerd 221864695 Apr 14 13:58 EVNT.48629115._000352.pool.root.1
[2026-04-14 16:08:19] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 14 13:58 start_atlas.sh
[2026-04-14 16:08:19] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 14 13:58 shared
[2026-04-14 16:08:19] -rw-r--r-- 2 whitlerd whitlerd    656946 Apr 14 13:58 input.tar.gz
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd      9273 Apr 14 13:58 init_data.xml
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 14 13:58 boinc_setup_complete
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 14 13:58 boinc_lockfile
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd      2627 Apr 14 13:58 pandaJob.out
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd    997922 Apr 14 13:58 agis_schedconf.cvmfs.json
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd   1511579 Apr 14 13:58 agis_ddmendpoints.agis.ALL.json
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd       438 Apr 14 13:59 workernode_map.json
[2026-04-14 16:08:19] drwx------ 5 whitlerd whitlerd      4096 Apr 14 13:59 pilot3
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd 195170565 Apr 14 16:06 HITS.49645815._008780.pool.root.1
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd       487 Apr 14 16:06 boinc_task_state.xml
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd      1029 Apr 14 16:07 memory_monitor_summary.json
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd    264465 Apr 14 16:07 log.49645815._008780.job.log.tgz.1
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd        95 Apr 14 16:07 pilot_heartbeat.json
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd      6362 Apr 14 16:07 heartbeat_new.json
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd      6253 Apr 14 16:07 heartbeat.json
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 14 16:08 boinc_mmap_file
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr 14 16:08 wrapper_checkpoint.txt
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd      4830 Apr 14 16:08 pilotlog.txt
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd    732468 Apr 14 16:08 log.49645815._008780.job.log.1
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd       357 Apr 14 16:08 output.list
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 14 16:08 runtime_log
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd   1013760 Apr 14 16:08 result.tar.gz
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd      8662 Apr 14 16:08 runtime_log.err
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd       650 Apr 14 16:08 d9a98e713aa5.diag
[2026-04-14 16:08:19] -rw-rw-r-- 1 whitlerd whitlerd     21366 Apr 14 16:08 stderr.txt
[2026-04-14 16:08:19] HITS file was successfully produced:
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd 195170565 Apr 14 16:06 shared/HITS.pool.root.1
[2026-04-14 16:08:19]  *** Contents of shared directory: ***
[2026-04-14 16:08:19] total 408928
[2026-04-14 16:08:19] -rw-r--r-- 2 whitlerd whitlerd 221864695 Apr 14 13:58 ATLAS.root_0
[2026-04-14 16:08:19] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 14 13:58 start_atlas.sh
[2026-04-14 16:08:19] -rw-r--r-- 2 whitlerd whitlerd    656946 Apr 14 13:58 input.tar.gz
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd 195170565 Apr 14 16:06 HITS.pool.root.1
[2026-04-14 16:08:19] -rw------- 1 whitlerd whitlerd   1013760 Apr 14 16:08 result.tar.gz
16:08:21 (444231): run_atlas exited; CPU time 29791.802842
16:08:21 (444231): called boinc_finish(0)

</stderr_txt>
]]>

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