Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:00 (57402): wrapper (7.7.26015): starting
19:45:00 (57402): wrapper: running run_atlas (--nthreads 4)
[2026-04-14 19:45:00] Arguments: --nthreads 4
[2026-04-14 19:45:00] Threads: 4
[2026-04-14 19:45:00] Checking for CVMFS
[2026-04-14 19:45:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 19:45:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 19:45:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 19:45:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 19:45:00] 2.9.2.0 4182769 398 65608 158462 2 50 19302125 36864000 0 130560 0 269188 99.989 17878 8456 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-14 19:45:00] CVMFS is ok
[2026-04-14 19:45:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 19:45:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 19:45:00] Further information can be found at the LHC@home message board.
[2026-04-14 19:45:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 19:45:00] Checking for apptainer binary...
[2026-04-14 19:45:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 19:45:00] Running /usr/bin/apptainer --version
[2026-04-14 19:45:00] apptainer version 1.4.1-1.1
[2026-04-14 19:45:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 19:45:00] thA317
[2026-04-14 19:45:00] apptainer works
[2026-04-14 19:45:00] Set ATHENA_PROC_NUMBER=4
[2026-04-14 19:45:00] Set ATHENA_CORE_NUMBER=4
[2026-04-14 19:45:00] Starting ATLAS job with PandaID=7089630013
[2026-04-14 19:45:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 21:01:24]  *** The last 200 lines of the pilot log: ***
[2026-04-14 21:01:24] ANSI_COLOR="0;31"
[2026-04-14 21:01:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 21:01:24] HOME_URL="https://www.centos.org/"
[2026-04-14 21:01:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 21:01:24] 
[2026-04-14 21:01:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 21:01:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 21:01:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 21:01:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 21:01:24] 
[2026-04-14 21:01:24] 2026-04-14 19:00:20,732 | INFO     | **************************************
[2026-04-14 21:01:24] 2026-04-14 19:00:21,236 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-14 21:01:24] 2026-04-14 19:00:21,254 | INFO     | sufficient remaining disk space (242201133056 B)
[2026-04-14 21:01:24] 2026-04-14 19:00:21,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 21:01:24] 2026-04-14 19:00:21,255 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 21:01:24] 2026-04-14 19:00:21,255 | INFO     | update_server=False
[2026-04-14 21:01:24] 2026-04-14 19:00:21,255 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 21:01:24] 2026-04-14 19:00:21,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 21:01:24] 2026-04-14 19:00:21,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 21:01:24] 2026-04-14 19:00:21,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 21:01:24] 2026-04-14 19:00:21,384 | INFO     | all job control threads have been joined
[2026-04-14 21:01:24] 2026-04-14 19:00:21,702 | INFO     | all payload control threads have been joined
[2026-04-14 21:01:24] 2026-04-14 19:00:22,192 | INFO     | all data control threads have been joined
[2026-04-14 21:01:24] 2026-04-14 19:00:22,256 | INFO     | [job] queue monitor thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:22,260 | INFO     | [job] retrieve thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:22,277 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:22,389 | INFO     | [job] control thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:22,425 | INFO     | [data] copytool_in thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:22,708 | INFO     | [payload] control thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:22,933 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:23,140 | INFO     | [payload] failed_post thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:23,197 | INFO     | [data] control thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:23,379 | INFO     | [data] copytool_out thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:23,649 | INFO     | [job] validate thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:23,717 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:23,771 | INFO     | [payload] validate_post thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:24,298 | WARNING  | process 66033 can no longer be monitored (due to stat problems) - aborting
[2026-04-14 21:01:24] 2026-04-14 19:00:24,334 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 21:01:24] 2026-04-14 19:00:24,334 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7089630013/payload.stdout) since it has not been created yet
[2026-04-14 21:01:24] 2026-04-14 19:00:24,335 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-14 21:01:24] 2026-04-14 19:00:24,351 | INFO     | sufficient remaining disk space (242201133056 B)
[2026-04-14 21:01:24] 2026-04-14 19:00:24,351 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-14 21:01:24] 2026-04-14 19:00:24,351 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7089630013/HITS.49263200._065104.pool.root.1 since it does not exist
[2026-04-14 21:01:24] 2026-04-14 19:00:24,397 | INFO     | number of running child processes to parent process 66033: 1
[2026-04-14 21:01:24] 2026-04-14 19:00:24,398 | INFO     | maximum number of monitored processes: 6
[2026-04-14 21:01:24] 2026-04-14 19:00:24,398 | INFO     | aborting job monitoring since job object (job id=7089630013) has expired
[2026-04-14 21:01:24] 2026-04-14 19:00:24,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 21:01:24] 2026-04-14 19:00:24,398 | INFO     | will abort loop
[2026-04-14 21:01:24] 2026-04-14 19:00:25,262 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:25,403 | INFO     | [job] job monitor thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:31,528 | INFO     | job.realtimelogging is not enabled
[2026-04-14 21:01:24] 2026-04-14 19:00:32,534 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 21:01:24] 2026-04-14 19:00:51,497 | INFO     | PID=61523 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-14 21:01:24] 2026-04-14 19:00:51,497 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 21:01:24] 2026-04-14 19:00:51,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 21:01:24] 2026-04-14 19:00:51,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 21:01:24] 2026-04-14 19:01:19,312 | INFO     | [monitor] cgroup control has ended
[2026-04-14 21:01:24] 2026-04-14 19:01:19,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737370859328)>', '<ExcThread(monitor, started 139736710616832)>']
[2026-04-14 21:01:24] 2026-04-14 19:01:20,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 21:01:24] 2026-04-14 19:01:20,650 | INFO     | [monitor] control thread has ended
[2026-04-14 21:01:24] 2026-04-14 19:01:24,713 | INFO     | all workflow threads have been joined
[2026-04-14 21:01:24] 2026-04-14 19:01:24,713 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 21:01:24] 2026-04-14 19:01:24,714 | INFO     | traces error code: 0
[2026-04-14 21:01:24] 2026-04-14 19:01:24,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 21:01:24] 2026-04-14 19:01:24,796 [wrapper] ==== pilot stdout END ====
[2026-04-14 21:01:24] 2026-04-14 19:01:24,800 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 21:01:24] 2026-04-14 19:01:24,804 [wrapper] pilotpid: 61523
[2026-04-14 21:01:24] 2026-04-14 19:01:24,808 [wrapper] Pilot exit status: 0
[2026-04-14 21:01:24] 2026-04-14 19:01:24,820 [wrapper] pandaids: 7089630013
[2026-04-14 21:01:24] 2026-04-14 19:01:24,845 [wrapper] cleanup supervisor_pilot   71384 61524
[2026-04-14 21:01:24] 2026-04-14 19:01:24,849 [wrapper] Test setup, not cleaning
[2026-04-14 21:01:24] 2026-04-14 19:01:24,854 [wrapper] apfmon messages muted
[2026-04-14 21:01:24] 2026-04-14 19:01:24,858 [wrapper] ==== wrapper stdout END ====
[2026-04-14 21:01:24] 2026-04-14 19:01:24,862 [wrapper] ==== wrapper stderr END ====
[2026-04-14 21:01:24]  *** Error codes and diagnostics ***
[2026-04-14 21:01:24]     "exeErrorCode": 0,
[2026-04-14 21:01:24]     "pilotErrorCode": 0,
[2026-04-14 21:01:24]  *** Listing of results directory ***
[2026-04-14 21:01:24] total 414716
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc    644190 Apr 13 18:26 pilot3.tar.gz
[2026-04-14 21:01:24] -rwx------ 1 boinc boinc     36322 Apr 13 18:29 runpilot2-wrapper.sh
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc      5094 Apr 13 18:32 queuedata.json
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc       100 Apr 14 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 21:01:24] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 19:44 run_atlas
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc       105 Apr 14 19:44 job.xml
[2026-04-14 21:01:24] -rw-r--r-- 2 boinc boinc 225992540 Apr 14 19:45 EVNT.49263198._001868.pool.root.1
[2026-04-14 21:01:24] drwxrwx--x 2 boinc boinc      4096 Apr 14 19:45 shared
[2026-04-14 21:01:24] -rw-r--r-- 2 boinc boinc    656925 Apr 14 19:45 input.tar.gz
[2026-04-14 21:01:24] -rw-r--r-- 2 boinc boinc     15665 Apr 14 19:45 start_atlas.sh
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc         0 Apr 14 19:45 boinc_setup_complete
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc      6292 Apr 14 19:45 init_data.xml
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc         0 Apr 14 19:45 boinc_lockfile
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc      2576 Apr 14 19:45 pandaJob.out
[2026-04-14 21:01:24] -rw------- 1 boinc boinc    997864 Apr 14 19:45 agis_schedconf.cvmfs.json
[2026-04-14 21:01:24] -rw------- 1 boinc boinc   1511579 Apr 14 19:45 agis_ddmendpoints.agis.ALL.json
[2026-04-14 21:01:24] -rw------- 1 boinc boinc       420 Apr 14 19:45 workernode_map.json
[2026-04-14 21:01:24] drwx------ 5 boinc boinc      4096 Apr 14 19:45 pilot3
[2026-04-14 21:01:24] -rw------- 1 boinc boinc 193269867 Apr 14 20:59 HITS.49263200._065104.pool.root.1
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc       487 Apr 14 21:00 boinc_task_state.xml
[2026-04-14 21:01:24] -rw------- 1 boinc boinc      1019 Apr 14 21:00 memory_monitor_summary.json
[2026-04-14 21:01:24] -rw------- 1 boinc boinc    235622 Apr 14 21:00 log.49263200._065104.job.log.tgz.1
[2026-04-14 21:01:24] -rw------- 1 boinc boinc      6317 Apr 14 21:00 heartbeat_new.json
[2026-04-14 21:01:24] -rw------- 1 boinc boinc      6208 Apr 14 21:00 heartbeat.json
[2026-04-14 21:01:24] -rw------- 1 boinc boinc        95 Apr 14 21:00 pilot_heartbeat.json
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc        27 Apr 14 21:00 wrapper_checkpoint.txt
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc      8192 Apr 14 21:00 boinc_mmap_file
[2026-04-14 21:01:24] -rw------- 1 boinc boinc      5988 Apr 14 21:01 pilotlog.txt
[2026-04-14 21:01:24] -rw------- 1 boinc boinc    443763 Apr 14 21:01 log.49263200._065104.job.log.1
[2026-04-14 21:01:24] -rw------- 1 boinc boinc       357 Apr 14 21:01 output.list
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc       410 Apr 14 21:01 runtime_log
[2026-04-14 21:01:24] -rw------- 1 boinc boinc    696320 Apr 14 21:01 result.tar.gz
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc      8518 Apr 14 21:01 runtime_log.err
[2026-04-14 21:01:24] -rw------- 1 boinc boinc       657 Apr 14 21:01 19eb0e3ff7e8.diag
[2026-04-14 21:01:24] -rw-r--r-- 1 boinc boinc      9829 Apr 14 21:01 stderr.txt
[2026-04-14 21:01:24] HITS file was successfully produced:
[2026-04-14 21:01:24] -rw------- 1 boinc boinc 193269867 Apr 14 20:59 shared/HITS.pool.root.1
[2026-04-14 21:01:24]  *** Contents of shared directory: ***
[2026-04-14 21:01:24] total 410788
[2026-04-14 21:01:24] -rw-r--r-- 2 boinc boinc 225992540 Apr 14 19:45 ATLAS.root_0
[2026-04-14 21:01:24] -rw-r--r-- 2 boinc boinc    656925 Apr 14 19:45 input.tar.gz
[2026-04-14 21:01:24] -rw-r--r-- 2 boinc boinc     15665 Apr 14 19:45 start_atlas.sh
[2026-04-14 21:01:24] -rw------- 1 boinc boinc 193269867 Apr 14 20:59 HITS.pool.root.1
[2026-04-14 21:01:24] -rw------- 1 boinc boinc    696320 Apr 14 21:01 result.tar.gz
21:01:25 (57402): run_atlas exited; CPU time 16595.935704
21:01:25 (57402): called boinc_finish(0)

</stderr_txt>
]]>

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