Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:44 (3865146): wrapper (7.7.26015): starting
00:02:44 (3865146): wrapper: running run_atlas (--nthreads 8)
[2026-04-14 00:02:44] Arguments: --nthreads 8
[2026-04-14 00:02:44] Threads: 8
[2026-04-14 00:02:44] Checking for CVMFS
[2026-04-14 00:02:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 00:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 00:02:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 00:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 00:02:47] 2.13.3.0 9435 229570 131984 158439 1 19 17532736 32935936 21356 16776704 0 907996704 99.682 757524759 31847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-14 00:02:47] CVMFS is ok
[2026-04-14 00:02:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 00:02:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 00:02:47] Further information can be found at the LHC@home message board.
[2026-04-14 00:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 00:02:47] Checking for apptainer binary...
[2026-04-14 00:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 00:02:47] Running /usr/bin/apptainer --version
[2026-04-14 00:02:48] apptainer version 1.4.5-2.el9
[2026-04-14 00:02:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 00:02:49] c-8-17.aglt2.org
[2026-04-14 00:02:49] apptainer works
[2026-04-14 00:02:49] Set ATHENA_PROC_NUMBER=8
[2026-04-14 00:02:49] Set ATHENA_CORE_NUMBER=8
[2026-04-14 00:02:49] Starting ATLAS job with PandaID=7089801506
[2026-04-14 00:02:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 11:53:24]  *** The last 200 lines of the pilot log: ***
[2026-04-14 11:53:24] 2026-04-14 15:52:30,551 | INFO     | stage-out finished correctly
[2026-04-14 11:53:24] 2026-04-14 15:52:32,622 | INFO     | monitor loop #2185: job 0:7089801506 is in state 'finished'
[2026-04-14 11:53:24] 2026-04-14 15:52:32,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,001 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-14 11:53:24] 2026-04-14 15:52:34,109 | INFO     | job 7089801506 has state=finished
[2026-04-14 11:53:24] 2026-04-14 15:52:34,110 | INFO     | preparing for final server update for job 7089801506 in state='finished'
[2026-04-14 11:53:24] 2026-04-14 15:52:34,110 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7089801506/jobReport.json
[2026-04-14 11:53:24] 2026-04-14 15:52:34,113 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-14 11:53:24] 2026-04-14 15:52:34,113 | INFO     | this job has now completed (state=finished)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,113 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,113 | INFO     | log transfer has been attempted: DONE
[2026-04-14 11:53:24] 2026-04-14 15:52:34,113 | INFO     | job 7089801506 has finished - writing final server update
[2026-04-14 11:53:24] 2026-04-14 15:52:34,114 | INFO     | total number of processed events: 400 (read)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,121 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7089801506/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,121 | INFO     | extracted standard info from prmon json
[2026-04-14 11:53:24] 2026-04-14 15:52:34,121 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 11:53:24] 2026-04-14 15:52:34,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 11:53:24] 2026-04-14 15:52:34,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 11:53:24] 2026-04-14 15:52:34,136 | INFO     | fitting pss+swap vs Time
[2026-04-14 11:53:24] 2026-04-14 15:52:34,137 | INFO     | sum of square deviations: 104097000292.02011
[2026-04-14 11:53:24] 2026-04-14 15:52:34,159 | INFO     | sum of deviations: 561825161263.7201
[2026-04-14 11:53:24] 2026-04-14 15:52:34,160 | INFO     | mean x (centered): 0.0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,160 | INFO     | mean y: 2501209.345323741
[2026-04-14 11:53:24] 2026-04-14 15:52:34,161 | INFO     | intersect: 2501209.345323741
[2026-04-14 11:53:24] 2026-04-14 15:52:34,162 | INFO     | chi2: 4.905127775793823
[2026-04-14 11:53:24] 2026-04-14 15:52:34,164 | INFO     | sum of square deviations: 101866692208.27408
[2026-04-14 11:53:24] 2026-04-14 15:52:34,191 | INFO     | sum of deviations: 600833779334.5825
[2026-04-14 11:53:24] 2026-04-14 15:52:34,192 | INFO     | mean x (centered): 0.0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,192 | INFO     | mean y: 2503858.8144927537
[2026-04-14 11:53:24] 2026-04-14 15:52:34,192 | INFO     | intersect: 2503858.8144927537
[2026-04-14 11:53:24] 2026-04-14 15:52:34,193 | INFO     | chi2: 4.2220990893071475
[2026-04-14 11:53:24] 2026-04-14 15:52:34,198 | INFO     | current chi2=4.2220990893071475 (change=13.92478886803591 %)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,198 | INFO     | right removable region: 689
[2026-04-14 11:53:24] 2026-04-14 15:52:34,199 | INFO     | sum of square deviations: 101866220068.27397
[2026-04-14 11:53:24] 2026-04-14 15:52:34,248 | INFO     | sum of deviations: 367407547427.34814
[2026-04-14 11:53:24] 2026-04-14 15:52:34,248 | INFO     | mean x (centered): 0.0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,248 | INFO     | mean y: 2514488.3768115942
[2026-04-14 11:53:24] 2026-04-14 15:52:34,248 | INFO     | intersect: 2514488.3768115942
[2026-04-14 11:53:24] 2026-04-14 15:52:34,249 | INFO     | chi2: 2.0450950088771136
[2026-04-14 11:53:24] 2026-04-14 15:52:34,250 | INFO     | current chi2=2.0450950088771136 (change=58.30699826068966 %)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,264 | INFO     | sum of square deviations: 99667533469.4366
[2026-04-14 11:53:24] 2026-04-14 15:52:34,284 | INFO     | sum of deviations: 295001945398.16345
[2026-04-14 11:53:24] 2026-04-14 15:52:34,284 | INFO     | mean x (centered): 0.0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,284 | INFO     | mean y: 2519502.4700729926
[2026-04-14 11:53:24] 2026-04-14 15:52:34,285 | INFO     | intersect: 2519502.4700729926
[2026-04-14 11:53:24] 2026-04-14 15:52:34,286 | INFO     | chi2: 1.6453036793451392
[2026-04-14 11:53:24] 2026-04-14 15:52:34,286 | INFO     | current chi2=1.6453036793451392 (change=19.54879004626221 %)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,286 | INFO     | left removable region: 10
[2026-04-14 11:53:24] 2026-04-14 15:52:34,287 | INFO     | sum of square deviations: 97071712255.70915
[2026-04-14 11:53:24] 2026-04-14 15:52:34,309 | INFO     | sum of deviations: 334608742050.8676
[2026-04-14 11:53:24] 2026-04-14 15:52:34,309 | INFO     | mean x (centered): 0.0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,309 | INFO     | mean y: 2522271.790868925
[2026-04-14 11:53:24] 2026-04-14 15:52:34,309 | INFO     | intersect: 2522271.790868925
[2026-04-14 11:53:24] 2026-04-14 15:52:34,310 | INFO     | chi2: 0.953367630982266
[2026-04-14 11:53:24] 2026-04-14 15:52:34,310 | INFO     | current memory leak: 3.45 B/s (using 679 data points, chi2=0.95)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,312 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,312 | INFO     | ..............................
[2026-04-14 11:53:24] 2026-04-14 15:52:34,322 | INFO     | . Timing measurements:
[2026-04-14 11:53:24] 2026-04-14 15:52:34,322 | INFO     | . get job = 1 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,322 | INFO     | . initial setup = 42 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,322 | INFO     | . payload setup = 53 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,323 | INFO     | . stage-in = 0 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,323 | INFO     | . payload execution = 42373 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,323 | INFO     | . stage-out = 3 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,323 | INFO     | . log creation = 0 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,323 | INFO     | ..............................
[2026-04-14 11:53:24] 2026-04-14 15:52:34,451 | INFO     | 
[2026-04-14 11:53:24] 2026-04-14 15:52:34,451 | INFO     | job summary report
[2026-04-14 11:53:24] 2026-04-14 15:52:34,451 | INFO     | --------------------------------------------------
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | PanDA job id: 7089801506
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | task id: 49263200
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | errors: (none)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | pilot state: finished 
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | transexitcode: 0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | exeerrorcode: 0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,452 | INFO     | exeerrordiag: 
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | exitcode: 0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | exitmsg: OK
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | cpuconsumptiontime: 49658 s
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | nevents: 400
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | neventsw: 0
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | pid: 3880533
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | pgrp: 3880533
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | corecount: 8
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | event service: False
[2026-04-14 11:53:24] 2026-04-14 15:52:34,453 | INFO     | sizes: {0: 2279062, 1: 2279663, 3: 2279747, 5: 2279831, 6: 2280204, 7: 2281788, 18: 2281816, 42430: 2324736, 42431: 2324735, 42435: 2333789, 42439: 2334319}
[2026-04-14 11:53:24] 2026-04-14 15:52:34,454 | INFO     | --------------------------------------------------
[2026-04-14 11:53:24] 2026-04-14 15:52:34,454 | INFO     | 
[2026-04-14 11:53:24] 2026-04-14 15:52:34,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-14 11:53:24] 2026-04-14 15:52:34,530 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,533 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,533 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,535 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,540 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,541 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 11:53:24] 2026-04-14 15:52:34,542 | INFO     | job 7089801506 has completed (purged errors)
[2026-04-14 11:53:24] 2026-04-14 15:52:34,542 | INFO     | overall cleanup function is called
[2026-04-14 11:53:24] 2026-04-14 15:52:35,559 | INFO     | --- collectZombieJob: --- 10, [3880533]
[2026-04-14 11:53:24] 2026-04-14 15:52:35,559 | INFO     | zombie collector waiting for pid 3880533
[2026-04-14 11:53:24] 2026-04-14 15:52:35,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 11:53:24] 2026-04-14 15:52:35,559 | INFO     | collected zombie processes
[2026-04-14 11:53:24] 2026-04-14 15:52:35,559 | INFO     | will attempt to kill all subprocesses of pid=3880533
[2026-04-14 11:53:24] 2026-04-14 15:52:36,185 | INFO     | process IDs to be killed: [3880533] (in reverse order)
[2026-04-14 11:53:24] 2026-04-14 15:52:36,459 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 11:53:24] 2026-04-14 15:52:36,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 11:53:24] 2026-04-14 15:52:36,478 | INFO     | did not find any defunct processes belonging to 3880533
[2026-04-14 11:53:24] 2026-04-14 15:52:36,496 | INFO     | did not find any defunct processes belonging to 3880533
[2026-04-14 11:53:24] 2026-04-14 15:52:36,496 | INFO     | Ready for new job
[2026-04-14 11:53:24] 2026-04-14 15:52:36,499 | INFO     | **************************************
[2026-04-14 11:53:24] 2026-04-14 15:52:36,499 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 11:53:24] 2026-04-14 15:52:36,499 | INFO     | **************************************
[2026-04-14 11:53:24] 2026-04-14 15:52:36,500 | INFO     | 
[2026-04-14 11:53:24] 2026-04-14 15:52:36,502 | INFO     | architecture information:
[2026-04-14 11:53:24] 2026-04-14 15:52:36,502 | INFO     | executing command: cat /etc/os-release
[2026-04-14 11:53:24] 2026-04-14 15:52:36,523 | INFO     | cat /etc/os-release:
[2026-04-14 11:53:24] NAME="CentOS Linux"
[2026-04-14 11:53:24] VERSION="7 (Core)"
[2026-04-14 11:53:24] ID="centos"
[2026-04-14 11:53:24] ID_LIKE="rhel fedora"
[2026-04-14 11:53:24] VERSION_ID="7"
[2026-04-14 11:53:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 11:53:24] ANSI_COLOR="0;31"
[2026-04-14 11:53:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 11:53:24] HOME_URL="https://www.centos.org/"
[2026-04-14 11:53:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 11:53:24] 
[2026-04-14 11:53:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 11:53:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 11:53:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 11:53:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 11:53:24] 
[2026-04-14 11:53:24] 2026-04-14 15:52:36,523 | INFO     | **************************************
[2026-04-14 11:53:24] 2026-04-14 15:52:37,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-14 11:53:24] 2026-04-14 15:52:37,063 | INFO     | sufficient remaining disk space (76489424896 B)
[2026-04-14 11:53:24] 2026-04-14 15:52:37,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 11:53:24] 2026-04-14 15:52:37,064 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 11:53:24] 2026-04-14 15:52:37,064 | INFO     | update_server=False
[2026-04-14 11:53:24] 2026-04-14 15:52:37,064 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 11:53:24] 2026-04-14 15:52:37,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 11:53:24] 2026-04-14 15:52:37,065 | INFO     | aborting loop
[2026-04-14 11:53:24] 2026-04-14 15:52:37,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 11:53:24] 2026-04-14 15:52:37,236 | INFO     | all job control threads have been joined
[2026-04-14 11:53:24] 2026-04-14 15:52:37,422 | INFO     | all payload control threads have been joined
[2026-04-14 11:53:24] 2026-04-14 15:52:37,864 | INFO     | all data control threads have been joined
[2026-04-14 11:53:24] 2026-04-14 15:52:38,070 | INFO     | [job] retrieve thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,071 | INFO     | [job] job monitor thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,242 | INFO     | [job] control thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,347 | INFO     | [job] validate thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,428 | INFO     | [payload] control thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,488 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,527 | INFO     | [payload] validate_post thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,870 | INFO     | [data] control thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:38,909 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:39,073 | INFO     | [data] copytool_out thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:39,107 | INFO     | [payload] failed_post thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:39,122 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:39,175 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:39,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 11:53:24] 2026-04-14 15:52:39,498 | INFO     | [data] copytool_in thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:40,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 11:53:24] 2026-04-14 15:52:40,471 | INFO     | [job] queue monitor thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:52:44,158 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 11:53:24] 2026-04-14 15:53:07,086 | INFO     | PID=3871592 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 11:53:24] 2026-04-14 15:53:07,087 | INFO     | .. there are 41 such processes running
[2026-04-14 11:53:24] 2026-04-14 15:53:07,087 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 11:53:24] 2026-04-14 15:53:07,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 11:53:24] 2026-04-14 15:53:07,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 11:53:24] 2026-04-14 15:53:16,848 | INFO     | [monitor] cgroup control has ended
[2026-04-14 11:53:24] 2026-04-14 15:53:18,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932491151168)>', '<ExcThread(monitor, started 139932148414208)>']
[2026-04-14 11:53:24] 2026-04-14 15:53:19,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 11:53:24] 2026-04-14 15:53:19,162 | INFO     | [monitor] control thread has ended
[2026-04-14 11:53:24] 2026-04-14 15:53:23,403 | INFO     | all workflow threads have been joined
[2026-04-14 11:53:24] 2026-04-14 15:53:23,403 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 11:53:24] 2026-04-14 15:53:23,403 | INFO     | traces error code: 0
[2026-04-14 11:53:24] 2026-04-14 15:53:23,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 11:53:24] 2026-04-14 15:53:23,814 [wrapper] ==== pilot stdout END ====
[2026-04-14 11:53:24] 2026-04-14 15:53:23,840 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 11:53:24] 2026-04-14 15:53:23,856 [wrapper] pilotpid: 3871592
[2026-04-14 11:53:24] 2026-04-14 15:53:23,880 [wrapper] Pilot exit status: 0
[2026-04-14 11:53:24] 2026-04-14 15:53:24,000 [wrapper] pandaids: 7089801506
[2026-04-14 11:53:24] 2026-04-14 15:53:24,143 [wrapper] cleanup supervisor_pilot 2918579 3871593
[2026-04-14 11:53:24] 2026-04-14 15:53:24,182 [wrapper] Test setup, not cleaning
[2026-04-14 11:53:24] 2026-04-14 15:53:24,199 [wrapper] apfmon messages muted
[2026-04-14 11:53:24] 2026-04-14 15:53:24,237 [wrapper] ==== wrapper stdout END ====
[2026-04-14 11:53:24] 2026-04-14 15:53:24,275 [wrapper] ==== wrapper stderr END ====
[2026-04-14 11:53:24]  *** Error codes and diagnostics ***
[2026-04-14 11:53:24]     "exeErrorCode": 0,
[2026-04-14 11:53:24]     "pilotErrorCode": 0,
[2026-04-14 11:53:24]  *** Listing of results directory ***
[2026-04-14 11:53:24] total 420428
[2026-04-14 11:53:24] -rwx------. 1 boincer umatlas     36322 Apr 13 15:39 runpilot2-wrapper.sh
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 15:39 queuedata.json
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 15:41 pilot3.tar.gz
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas       100 Apr 14 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 11:53:24] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 14 00:02 run_atlas
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas       105 Apr 14 00:02 job.xml
[2026-04-14 11:53:24] -rw-r--r--. 2 boincer umatlas 224238073 Apr 14 00:02 EVNT.49263198._001956.pool.root.1
[2026-04-14 11:53:24] -rw-r--r--. 2 boincer umatlas     15665 Apr 14 00:02 start_atlas.sh
[2026-04-14 11:53:24] drwxrwx--x. 2 boincer umatlas      4096 Apr 14 00:02 shared
[2026-04-14 11:53:24] -rw-r--r--. 2 boincer umatlas    656929 Apr 14 00:02 input.tar.gz
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas         0 Apr 14 00:02 boinc_lockfile
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas      2576 Apr 14 00:02 pandaJob.out
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas        57 Apr 14 00:02 setup.sh.local
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas    997512 Apr 14 00:04 agis_schedconf.cvmfs.json
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas       440 Apr 14 00:04 workernode_map.json
[2026-04-14 11:53:24] drwx------. 5 boincer umatlas      4096 Apr 14 00:04 pilot3
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas      6576 Apr 14 11:46 init_data.xml
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas 194757231 Apr 14 11:51 HITS.49263200._067379.pool.root.1
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas       489 Apr 14 11:51 boinc_task_state.xml
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas      1057 Apr 14 11:52 memory_monitor_summary.json
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas   1511579 Apr 14 11:52 agis_ddmendpoints.agis.ALL.json
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas        95 Apr 14 11:52 pilot_heartbeat.json
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas    620951 Apr 14 11:52 log.49263200._067379.job.log.tgz.1
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas      6433 Apr 14 11:52 heartbeat_new.json
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas      6324 Apr 14 11:52 heartbeat.json
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas      8192 Apr 14 11:53 boinc_mmap_file
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas        28 Apr 14 11:53 wrapper_checkpoint.txt
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas      4819 Apr 14 11:53 pilotlog.txt
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas   3114520 Apr 14 11:53 log.49263200._067379.job.log.1
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas       357 Apr 14 11:53 output.list
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas       410 Apr 14 11:53 runtime_log
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas   3758080 Apr 14 11:53 result.tar.gz
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas      8954 Apr 14 11:53 runtime_log.err
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas       661 Apr 14 11:53 4657d7c3154b.diag
[2026-04-14 11:53:24] -rw-r--r--. 1 boincer umatlas      2141 Apr 14 11:53 stderr.txt
[2026-04-14 11:53:24] HITS file was successfully produced:
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas 194757231 Apr 14 11:51 shared/HITS.pool.root.1
[2026-04-14 11:53:24]  *** Contents of shared directory: ***
[2026-04-14 11:53:24] total 413520
[2026-04-14 11:53:24] -rw-r--r--. 2 boincer umatlas 224238073 Apr 14 00:02 ATLAS.root_0
[2026-04-14 11:53:24] -rw-r--r--. 2 boincer umatlas     15665 Apr 14 00:02 start_atlas.sh
[2026-04-14 11:53:24] -rw-r--r--. 2 boincer umatlas    656929 Apr 14 00:02 input.tar.gz
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas 194757231 Apr 14 11:51 HITS.pool.root.1
[2026-04-14 11:53:24] -rw-------. 1 boincer umatlas   3758080 Apr 14 11:53 result.tar.gz
11:53:26 (3865146): run_atlas exited; CPU time 51581.612148
11:53:26 (3865146): called boinc_finish(0)

</stderr_txt>
]]>

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