Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:38:41 (340969): wrapper (7.7.26015): starting
16:38:41 (340969): wrapper: running run_atlas (--nthreads 9)
[2026-04-13 16:38:41] Arguments: --nthreads 9
[2026-04-13 16:38:41] Threads: 9
[2026-04-13 16:38:41] Checking for CVMFS
[2026-04-13 16:38:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 16:38:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 16:38:42] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 16:38:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 16:38:43] 2.13.3.0 1498245 58030 477476 158428 2 553 23707638 40960001 27805 16776704 1 231346947 99.774 181184025 18370 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 16:38:43] CVMFS is ok
[2026-04-13 16:38:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 16:38:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 16:38:43] Further information can be found at the LHC@home message board.
[2026-04-13 16:38:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 16:38:43] Checking for apptainer binary...
[2026-04-13 16:38:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 16:38:43] Running /usr/bin/apptainer --version
[2026-04-13 16:38:43] apptainer version 1.4.5-2.el9
[2026-04-13 16:38:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 16:38:44] c7-11-14.aglt2.org
[2026-04-13 16:38:44] apptainer works
[2026-04-13 16:38:44] Set ATHENA_PROC_NUMBER=9
[2026-04-13 16:38:44] Set ATHENA_CORE_NUMBER=9
[2026-04-13 16:38:44] Starting ATLAS job with PandaID=7087027553
[2026-04-13 16:38:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 18:47:11]  *** The last 200 lines of the pilot log: ***
[2026-04-13 18:47:11] 2026-04-13 22:46:03,171 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 18:47:11] 2026-04-13 22:46:03,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 18:47:11] 2026-04-13 22:46:03,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 18:47:11] 2026-04-13 22:46:03,174 | INFO     | fitting pss+swap vs Time
[2026-04-13 18:47:11] 2026-04-13 22:46:03,174 | INFO     | sum of square deviations: 576889576.5365875
[2026-04-13 18:47:11] 2026-04-13 22:46:03,175 | INFO     | sum of deviations: 39842215213.7317
[2026-04-13 18:47:11] 2026-04-13 22:46:03,175 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,175 | INFO     | mean y: 2497728.6829268294
[2026-04-13 18:47:11] 2026-04-13 22:46:03,175 | INFO     | intersect: 2497728.6829268294
[2026-04-13 18:47:11] 2026-04-13 22:46:03,175 | INFO     | chi2: 4.057868469628731
[2026-04-13 18:47:11] 2026-04-13 22:46:03,176 | INFO     | sum of square deviations: 509367911.9406776
[2026-04-13 18:47:11] 2026-04-13 22:46:03,176 | INFO     | sum of deviations: 38369575673.364395
[2026-04-13 18:47:11] 2026-04-13 22:46:03,176 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,176 | INFO     | mean y: 2494401.2966101696
[2026-04-13 18:47:11] 2026-04-13 22:46:03,176 | INFO     | intersect: 2494401.2966101696
[2026-04-13 18:47:11] 2026-04-13 22:46:03,177 | INFO     | chi2: 4.06377212911714
[2026-04-13 18:47:11] 2026-04-13 22:46:03,177 | INFO     | current chi2=4.06377212911714 (change=-0.14548671383993378 %)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,177 | INFO     | right removable region: 117
[2026-04-13 18:47:11] 2026-04-13 22:46:03,177 | INFO     | sum of square deviations: 509320331.9406776
[2026-04-13 18:47:11] 2026-04-13 22:46:03,177 | INFO     | sum of deviations: 4828030136.127124
[2026-04-13 18:47:11] 2026-04-13 22:46:03,177 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,178 | INFO     | mean y: 2576487.940677966
[2026-04-13 18:47:11] 2026-04-13 22:46:03,178 | INFO     | intersect: 2576487.940677966
[2026-04-13 18:47:11] 2026-04-13 22:46:03,178 | INFO     | chi2: 0.80575329013686
[2026-04-13 18:47:11] 2026-04-13 22:46:03,178 | INFO     | current chi2=0.80575329013686 (change=80.14343500368356 %)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,178 | INFO     | sum of square deviations: 447239562.1592931
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | sum of deviations: -8809845215.769907
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | mean y: 2609660.663716814
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | intersect: 2609660.663716814
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | chi2: 0.21446975679500882
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | current chi2=0.21446975679500882 (change=73.38270170034548 %)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,179 | INFO     | sum of square deviations: 390428369.51851904
[2026-04-13 18:47:11] 2026-04-13 22:46:03,180 | INFO     | sum of deviations: -12832410261.314827
[2026-04-13 18:47:11] 2026-04-13 22:46:03,180 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,180 | INFO     | mean y: 2620338.787037037
[2026-04-13 18:47:11] 2026-04-13 22:46:03,180 | INFO     | intersect: 2620338.787037037
[2026-04-13 18:47:11] 2026-04-13 22:46:03,180 | INFO     | chi2: 0.12820770259630998
[2026-04-13 18:47:11] 2026-04-13 22:46:03,180 | INFO     | current chi2=0.12820770259630998 (change=40.2210808124096 %)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,181 | INFO     | sum of square deviations: 338654189.6699028
[2026-04-13 18:47:11] 2026-04-13 22:46:03,181 | INFO     | sum of deviations: -12025261367.417475
[2026-04-13 18:47:11] 2026-04-13 22:46:03,181 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,181 | INFO     | mean y: 2617792.825242718
[2026-04-13 18:47:11] 2026-04-13 22:46:03,181 | INFO     | intersect: 2617792.825242718
[2026-04-13 18:47:11] 2026-04-13 22:46:03,181 | INFO     | chi2: 0.11241275055854122
[2026-04-13 18:47:11] 2026-04-13 22:46:03,182 | INFO     | current chi2=0.11241275055854122 (change=12.31981520447537 %)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,182 | INFO     | left removable region: 20
[2026-04-13 18:47:11] 2026-04-13 22:46:03,182 | INFO     | sum of square deviations: 282850654.55670106
[2026-04-13 18:47:11] 2026-04-13 22:46:03,182 | INFO     | sum of deviations: -11242979463.010307
[2026-04-13 18:47:11] 2026-04-13 22:46:03,182 | INFO     | mean x (centered): 0.0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,182 | INFO     | mean y: 2620360.319587629
[2026-04-13 18:47:11] 2026-04-13 22:46:03,183 | INFO     | intersect: 2620360.319587629
[2026-04-13 18:47:11] 2026-04-13 22:46:03,183 | INFO     | chi2: 0.10784778878951094
[2026-04-13 18:47:11] 2026-04-13 22:46:03,183 | INFO     | current memory leak: -39.75 B/s (using 97 data points, chi2=0.11)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,183 | INFO     | could have reported an average CPU frequency of 3291 MHz (8 samples)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,183 | INFO     | ..............................
[2026-04-13 18:47:11] 2026-04-13 22:46:03,183 | INFO     | . Timing measurements:
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . get job = 0 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . initial setup = 32 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . payload setup = 48 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . stage-in = 0 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . payload execution = 7501 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . stage-out = 1 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | . log creation = 0 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,184 | INFO     | ..............................
[2026-04-13 18:47:11] 2026-04-13 22:46:03,741 | INFO     | 
[2026-04-13 18:47:11] 2026-04-13 22:46:03,741 | INFO     | job summary report
[2026-04-13 18:47:11] 2026-04-13 22:46:03,741 | INFO     | --------------------------------------------------
[2026-04-13 18:47:11] 2026-04-13 22:46:03,741 | INFO     | PanDA job id: 7087027553
[2026-04-13 18:47:11] 2026-04-13 22:46:03,741 | INFO     | task id: 49263191
[2026-04-13 18:47:11] 2026-04-13 22:46:03,741 | INFO     | errors: (none)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | pilot state: finished 
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | transexitcode: 0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | exeerrorcode: 0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | exeerrordiag: 
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | exitcode: 0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | exitmsg: OK
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | cpuconsumptiontime: 31430 s
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | nevents: 400
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | neventsw: 0
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | pid: 370027
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | pgrp: 370027
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | corecount: 9
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | event service: False
[2026-04-13 18:47:11] 2026-04-13 22:46:03,742 | INFO     | sizes: {0: 2279014, 1: 2279926, 2: 2281500, 12: 2281528, 7553: 2309243, 7555: 2318241, 7556: 2318425, 7557: 2318619}
[2026-04-13 18:47:11] 2026-04-13 22:46:03,743 | INFO     | --------------------------------------------------
[2026-04-13 18:47:11] 2026-04-13 22:46:03,743 | INFO     | 
[2026-04-13 18:47:11] 2026-04-13 22:46:03,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,765 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 18:47:11] 2026-04-13 22:46:03,765 | INFO     | job 7087027553 has completed (purged errors)
[2026-04-13 18:47:11] 2026-04-13 22:46:03,765 | INFO     | overall cleanup function is called
[2026-04-13 18:47:11] 2026-04-13 22:46:04,778 | INFO     | --- collectZombieJob: --- 10, [370027]
[2026-04-13 18:47:11] 2026-04-13 22:46:04,778 | INFO     | zombie collector waiting for pid 370027
[2026-04-13 18:47:11] 2026-04-13 22:46:04,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 18:47:11] 2026-04-13 22:46:04,778 | INFO     | collected zombie processes
[2026-04-13 18:47:11] 2026-04-13 22:46:04,778 | INFO     | will attempt to kill all subprocesses of pid=370027
[2026-04-13 18:47:11] 2026-04-13 22:46:05,182 | INFO     | process IDs to be killed: [370027] (in reverse order)
[2026-04-13 18:47:11] 2026-04-13 22:46:05,347 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 18:47:11] 2026-04-13 22:46:05,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 18:47:11] 2026-04-13 22:46:05,412 | INFO     | did not find any defunct processes belonging to 370027
[2026-04-13 18:47:11] 2026-04-13 22:46:05,430 | INFO     | did not find any defunct processes belonging to 370027
[2026-04-13 18:47:11] 2026-04-13 22:46:05,430 | INFO     | Ready for new job
[2026-04-13 18:47:11] 2026-04-13 22:46:05,434 | INFO     | **************************************
[2026-04-13 18:47:11] 2026-04-13 22:46:05,436 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 18:47:11] 2026-04-13 22:46:05,436 | INFO     | **************************************
[2026-04-13 18:47:11] 2026-04-13 22:46:05,436 | INFO     | 
[2026-04-13 18:47:11] 2026-04-13 22:46:05,439 | INFO     | architecture information:
[2026-04-13 18:47:11] 2026-04-13 22:46:05,440 | INFO     | executing command: cat /etc/os-release
[2026-04-13 18:47:11] 2026-04-13 22:46:05,457 | INFO     | cat /etc/os-release:
[2026-04-13 18:47:11] NAME="CentOS Linux"
[2026-04-13 18:47:11] VERSION="7 (Core)"
[2026-04-13 18:47:11] ID="centos"
[2026-04-13 18:47:11] ID_LIKE="rhel fedora"
[2026-04-13 18:47:11] VERSION_ID="7"
[2026-04-13 18:47:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 18:47:11] ANSI_COLOR="0;31"
[2026-04-13 18:47:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 18:47:11] HOME_URL="https://www.centos.org/"
[2026-04-13 18:47:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 18:47:11] 
[2026-04-13 18:47:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 18:47:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 18:47:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 18:47:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 18:47:11] 
[2026-04-13 18:47:11] 2026-04-13 22:46:05,457 | INFO     | **************************************
[2026-04-13 18:47:11] 2026-04-13 22:46:05,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-13 18:47:11] 2026-04-13 22:46:05,980 | INFO     | sufficient remaining disk space (85007007744 B)
[2026-04-13 18:47:11] 2026-04-13 22:46:05,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 18:47:11] 2026-04-13 22:46:05,980 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 18:47:11] 2026-04-13 22:46:05,980 | INFO     | update_server=False
[2026-04-13 18:47:11] 2026-04-13 22:46:05,980 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 18:47:11] 2026-04-13 22:46:06,226 | INFO     | all job control threads have been joined
[2026-04-13 18:47:11] 2026-04-13 22:46:06,341 | INFO     | all payload control threads have been joined
[2026-04-13 18:47:11] 2026-04-13 22:46:06,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 18:47:11] 2026-04-13 22:46:06,873 | INFO     | all data control threads have been joined
[2026-04-13 18:47:11] 2026-04-13 22:46:06,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 18:47:11] 2026-04-13 22:46:06,968 | INFO     | aborting loop
[2026-04-13 18:47:11] 2026-04-13 22:46:06,982 | INFO     | [job] retrieve thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,231 | INFO     | [job] control thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,342 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,348 | INFO     | [payload] control thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,609 | INFO     | [job] validate thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,778 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,878 | INFO     | [data] control thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,879 | INFO     | [data] copytool_in thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,912 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:07,973 | INFO     | [job] job monitor thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:08,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 18:47:11] 2026-04-13 22:46:08,248 | INFO     | [payload] failed_post thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:08,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 18:47:11] 2026-04-13 22:46:08,458 | INFO     | [data] copytool_out thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:08,510 | INFO     | [payload] validate_post thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:09,289 | INFO     | [job] queue monitor thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:12,105 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:16,182 | INFO     | job.realtimelogging is not enabled
[2026-04-13 18:47:11] 2026-04-13 22:46:17,188 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 18:47:11] 2026-04-13 22:46:37,282 | INFO     | PID=350240 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-13 18:47:11] 2026-04-13 22:46:37,284 | INFO     | .. there are 24 such processes running
[2026-04-13 18:47:11] 2026-04-13 22:46:37,284 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 18:47:11] 2026-04-13 22:46:37,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 18:47:11] 2026-04-13 22:46:37,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 18:47:11] 2026-04-13 22:47:05,330 | INFO     | [monitor] cgroup control has ended
[2026-04-13 18:47:11] 2026-04-13 22:47:05,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411934594880)>', '<ExcThread(monitor, started 140410995336960)>']
[2026-04-13 18:47:11] 2026-04-13 22:47:06,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 18:47:11] 2026-04-13 22:47:06,457 | INFO     | [monitor] control thread has ended
[2026-04-13 18:47:11] 2026-04-13 22:47:10,801 | INFO     | all workflow threads have been joined
[2026-04-13 18:47:11] 2026-04-13 22:47:10,801 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 18:47:11] 2026-04-13 22:47:10,801 | INFO     | traces error code: 0
[2026-04-13 18:47:11] 2026-04-13 22:47:10,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 18:47:11] 2026-04-13 22:47:11,151 [wrapper] ==== pilot stdout END ====
[2026-04-13 18:47:11] 2026-04-13 22:47:11,156 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 18:47:11] 2026-04-13 22:47:11,160 [wrapper] pilotpid: 350240
[2026-04-13 18:47:11] 2026-04-13 22:47:11,162 [wrapper] Pilot exit status: 0
[2026-04-13 18:47:11] 2026-04-13 22:47:11,208 [wrapper] pandaids: 7087027553
[2026-04-13 18:47:11] 2026-04-13 22:47:11,316 [wrapper] cleanup supervisor_pilot 1040940 350241
[2026-04-13 18:47:11] 2026-04-13 22:47:11,325 [wrapper] Test setup, not cleaning
[2026-04-13 18:47:11] 2026-04-13 22:47:11,337 [wrapper] apfmon messages muted
[2026-04-13 18:47:11] 2026-04-13 22:47:11,343 [wrapper] ==== wrapper stdout END ====
[2026-04-13 18:47:11] 2026-04-13 22:47:11,346 [wrapper] ==== wrapper stderr END ====
[2026-04-13 18:47:11]  *** Error codes and diagnostics ***
[2026-04-13 18:47:11]     "exeErrorCode": 0,
[2026-04-13 18:47:11]     "pilotErrorCode": 0,
[2026-04-13 18:47:11]  *** Listing of results directory ***
[2026-04-13 18:47:11] total 415332
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas    644190 Apr 11 08:50 pilot3.tar.gz
[2026-04-13 18:47:11] -rwx------. 1 boincer umatlas     36322 Apr 11 09:17 runpilot2-wrapper.sh
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas      5094 Apr 11 09:19 queuedata.json
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas       100 Apr 13 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 18:47:11] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 16:38 run_atlas
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas       105 Apr 13 16:38 job.xml
[2026-04-13 18:47:11] -rw-r--r--. 2 boincer umatlas 226913804 Apr 13 16:38 EVNT.49263189._001098.pool.root.1
[2026-04-13 18:47:11] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 16:38 start_atlas.sh
[2026-04-13 18:47:11] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 16:38 shared
[2026-04-13 18:47:11] -rw-r--r--. 2 boincer umatlas    656930 Apr 13 16:38 input.tar.gz
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas         0 Apr 13 16:38 boinc_lockfile
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 16:38 pandaJob.out
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas        57 Apr 13 16:38 setup.sh.local
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas    997512 Apr 13 16:39 agis_schedconf.cvmfs.json
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas   1511579 Apr 13 16:39 agis_ddmendpoints.agis.ALL.json
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas       430 Apr 13 16:39 workernode_map.json
[2026-04-13 18:47:11] drwx------. 5 boincer umatlas      4096 Apr 13 16:39 pilot3
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas      6818 Apr 13 18:36 init_data.xml
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas 192171182 Apr 13 18:45 HITS.49263191._047942.pool.root.1
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas       487 Apr 13 18:45 boinc_task_state.xml
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas        95 Apr 13 18:45 pilot_heartbeat.json
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas      1042 Apr 13 18:45 memory_monitor_summary.json
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas    364350 Apr 13 18:46 log.49263191._047942.job.log.tgz.1
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas      6376 Apr 13 18:46 heartbeat_new.json
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas      6267 Apr 13 18:46 heartbeat.json
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas        27 Apr 13 18:47 wrapper_checkpoint.txt
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas      4890 Apr 13 18:47 pilotlog.txt
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas    712562 Apr 13 18:47 log.49263191._047942.job.log.1
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 18:47 boinc_mmap_file
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas       357 Apr 13 18:47 output.list
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas       410 Apr 13 18:47 runtime_log
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas   1095680 Apr 13 18:47 result.tar.gz
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas      8963 Apr 13 18:47 runtime_log.err
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas       657 Apr 13 18:47 49fa989db94a.diag
[2026-04-13 18:47:11] -rw-r--r--. 1 boincer umatlas     20835 Apr 13 18:47 stderr.txt
[2026-04-13 18:47:11] HITS file was successfully produced:
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas 192171182 Apr 13 18:45 shared/HITS.pool.root.1
[2026-04-13 18:47:11]  *** Contents of shared directory: ***
[2026-04-13 18:47:11] total 411004
[2026-04-13 18:47:11] -rw-r--r--. 2 boincer umatlas 226913804 Apr 13 16:38 ATLAS.root_0
[2026-04-13 18:47:11] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 16:38 start_atlas.sh
[2026-04-13 18:47:11] -rw-r--r--. 2 boincer umatlas    656930 Apr 13 16:38 input.tar.gz
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas 192171182 Apr 13 18:45 HITS.pool.root.1
[2026-04-13 18:47:11] -rw-------. 1 boincer umatlas   1095680 Apr 13 18:47 result.tar.gz
18:47:13 (340969): run_atlas exited; CPU time 31575.191080
18:47:13 (340969): called boinc_finish(0)

</stderr_txt>
]]>

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