Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:54:16 (1087585): wrapper (7.7.26015): starting
09:54:16 (1087585): wrapper: running run_atlas (--nthreads 4)
[2026-04-16 09:54:16] Arguments: --nthreads 4
[2026-04-16 09:54:16] Threads: 4
[2026-04-16 09:54:16] Checking for CVMFS
[2026-04-16 09:54:16] No cvmfs_config command found, will try listing directly
[2026-04-16 09:54:16] CVMFS is ok
[2026-04-16 09:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-16 09:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-16 09:54:16] Further information can be found at the LHC@home message board.
[2026-04-16 09:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-16 09:54:16] Checking for apptainer binary...
[2026-04-16 09:54:16] which: no apptainer in ((null))
[2026-04-16 09:54:16] apptainer is not installed, using version from CVMFS
[2026-04-16 09:54:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-16 09:54:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-16 09:54:16] apptainer works
[2026-04-16 09:54:16] Set ATHENA_PROC_NUMBER=4
[2026-04-16 09:54:16] Set ATHENA_CORE_NUMBER=4
[2026-04-16 09:54:16] Starting ATLAS job with PandaID=7089566860
[2026-04-16 09:54:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-16 12:17:43]  *** The last 200 lines of the pilot log: ***
[2026-04-16 12:17:43] 2026-04-16 10:16:36,830 | INFO     | job 7089566860 has finished - writing final server update
[2026-04-16 12:17:43] 2026-04-16 10:16:36,830 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_21096/.job.ad'
[2026-04-16 12:17:43] 2026-04-16 10:16:36,830 | INFO     | total number of processed events: 400 (read)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,837 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7089566860/memory_monitor_summary.json (trf name=prmon)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,838 | INFO     | extracted standard info from prmon json
[2026-04-16 12:17:43] 2026-04-16 10:16:36,838 | INFO     | extracted standard memory fields from prmon json
[2026-04-16 12:17:43] 2026-04-16 10:16:36,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-16 12:17:43] 2026-04-16 10:16:36,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-16 12:17:43] 2026-04-16 10:16:36,839 | INFO     | fitting pss+swap vs Time
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | sum of square deviations: 850825255.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | sum of deviations: 2470985895.5
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | mean x (centered): 0.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | mean y: 2328163.2928571426
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | intersect: 2328163.2928571426
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | chi2: 1.7786703830688744
[2026-04-16 12:17:43] 2026-04-16 10:16:36,840 | INFO     | sum of square deviations: 762879420.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | sum of deviations: 10308648579.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | mean x (centered): 0.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | mean y: 2341349.7407407407
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | intersect: 2341349.7407407407
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | chi2: 1.1138996404232926
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | current chi2=1.1138996404232926 (change=37.37458884869959 %)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,841 | INFO     | sum of square deviations: 681212772.5
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | sum of deviations: 9860209397.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | mean x (centered): 0.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | mean y: 2340511.4153846153
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | intersect: 2340511.4153846153
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | chi2: 1.1151736905836565
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | current chi2=1.1151736905836565 (change=-0.11437746401279998 %)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | right removable region: 129
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | sum of square deviations: 762879420.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,842 | INFO     | sum of deviations: -11155011623.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | mean x (centered): 0.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | mean y: 2351270.6222222224
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | intersect: 2351270.6222222224
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | chi2: 0.7011401386163523
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | current chi2=0.7011401386163523 (change=60.58065927838624 %)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | sum of square deviations: 681212772.5
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | sum of deviations: -9410828405.5
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | mean x (centered): 0.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | mean y: 2347999.684615385
[2026-04-16 12:17:43] 2026-04-16 10:16:36,843 | INFO     | intersect: 2347999.684615385
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | chi2: 0.6989711348200099
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | current chi2=0.6989711348200099 (change=0.3093538191413054 %)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | left removable region: 10
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | sum of square deviations: 522502820.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | sum of deviations: -1717529298.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | mean x (centered): 0.0
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | mean y: 2363046.3025210085
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | intersect: 2363046.3025210085
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | chi2: 0.012972722406927954
[2026-04-16 12:17:43] 2026-04-16 10:16:36,844 | INFO     | current memory leak: -3.29 B/s (using 119 data points, chi2=0.01)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | could have reported an average CPU frequency of 3119 MHz (8 samples)
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | ..............................
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . Timing measurements:
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . get job = 0 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . initial setup = 4 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . payload setup = 7 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . stage-in = 0 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . payload execution = 8502 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . stage-out = 0 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | . log creation = 0 s
[2026-04-16 12:17:43] 2026-04-16 10:16:36,845 | INFO     | ..............................
[2026-04-16 12:17:43] 2026-04-16 10:16:37,116 | INFO     | 
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | job summary report
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | --------------------------------------------------
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | PanDA job id: 7089566860
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | task id: 49645815
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | errors: (none)
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | pilot state: finished 
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | transexitcode: 0
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | exeerrorcode: 0
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | exeerrordiag: 
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | exitcode: 0
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | exitmsg: OK
[2026-04-16 12:17:43] 2026-04-16 10:16:37,117 | INFO     | cpuconsumptiontime: 32826 s
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | nevents: 400
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | neventsw: 0
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | pid: 1096229
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | pgrp: 1096229
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | corecount: 4
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | event service: False
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | sizes: {0: 2281598, 11: 2281598, 8512: 2309605, 8514: 2318625, 8515: 2318681, 8518: 2318875}
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | --------------------------------------------------
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | 
[2026-04-16 12:17:43] 2026-04-16 10:16:37,118 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | job 7089566860 has completed (purged errors)
[2026-04-16 12:17:43] 2026-04-16 10:16:37,135 | INFO     | overall cleanup function is called
[2026-04-16 12:17:43] 2026-04-16 10:16:38,141 | INFO     | --- collectZombieJob: --- 10, [1096229]
[2026-04-16 12:17:43] 2026-04-16 10:16:38,141 | INFO     | zombie collector waiting for pid 1096229
[2026-04-16 12:17:43] 2026-04-16 10:16:38,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-16 12:17:43] 2026-04-16 10:16:38,141 | INFO     | collected zombie processes
[2026-04-16 12:17:43] 2026-04-16 10:16:38,141 | INFO     | will attempt to kill all subprocesses of pid=1096229
[2026-04-16 12:17:43] 2026-04-16 10:16:38,325 | INFO     | process IDs to be killed: [1096229] (in reverse order)
[2026-04-16 12:17:43] 2026-04-16 10:16:38,395 | WARNING  | found no corresponding commands to process id(s)
[2026-04-16 12:17:43] 2026-04-16 10:16:38,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-16 12:17:43] 2026-04-16 10:16:38,402 | INFO     | did not find any defunct processes belonging to 1096229
[2026-04-16 12:17:43] 2026-04-16 10:16:38,409 | INFO     | did not find any defunct processes belonging to 1096229
[2026-04-16 12:17:43] 2026-04-16 10:16:38,409 | INFO     | Ready for new job
[2026-04-16 12:17:43] 2026-04-16 10:16:38,410 | INFO     | **************************************
[2026-04-16 12:17:43] 2026-04-16 10:16:38,410 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-16 12:17:43] 2026-04-16 10:16:38,411 | INFO     | **************************************
[2026-04-16 12:17:43] 2026-04-16 10:16:38,411 | INFO     | 
[2026-04-16 12:17:43] 2026-04-16 10:16:38,413 | INFO     | architecture information:
[2026-04-16 12:17:43] 2026-04-16 10:16:38,413 | INFO     | executing command: cat /etc/os-release
[2026-04-16 12:17:43] 2026-04-16 10:16:38,424 | INFO     | cat /etc/os-release:
[2026-04-16 12:17:43] NAME="CentOS Linux"
[2026-04-16 12:17:43] VERSION="7 (Core)"
[2026-04-16 12:17:43] ID="centos"
[2026-04-16 12:17:43] ID_LIKE="rhel fedora"
[2026-04-16 12:17:43] VERSION_ID="7"
[2026-04-16 12:17:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-16 12:17:43] ANSI_COLOR="0;31"
[2026-04-16 12:17:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-16 12:17:43] HOME_URL="https://www.centos.org/"
[2026-04-16 12:17:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-16 12:17:43] 
[2026-04-16 12:17:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-16 12:17:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-16 12:17:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-16 12:17:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-16 12:17:43] 
[2026-04-16 12:17:43] 2026-04-16 10:16:38,424 | INFO     | **************************************
[2026-04-16 12:17:43] 2026-04-16 10:16:38,927 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-04-16 12:17:43] 2026-04-16 10:16:38,938 | INFO     | sufficient remaining disk space (66911731712 B)
[2026-04-16 12:17:43] 2026-04-16 10:16:38,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-16 12:17:43] 2026-04-16 10:16:38,938 | INFO     | current server update state: UPDATING_FINAL
[2026-04-16 12:17:43] 2026-04-16 10:16:38,938 | INFO     | update_server=False
[2026-04-16 12:17:43] 2026-04-16 10:16:38,938 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-16 12:17:43] 2026-04-16 10:16:38,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-16 12:17:43] 2026-04-16 10:16:39,142 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-16 12:17:43] 2026-04-16 10:16:39,142 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-16 12:17:43] 2026-04-16 10:16:39,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-16 12:17:43] 2026-04-16 10:16:39,143 | INFO     | will abort loop
[2026-04-16 12:17:43] 2026-04-16 10:16:39,936 | INFO     | all data control threads have been joined
[2026-04-16 12:17:43] 2026-04-16 10:16:39,944 | INFO     | [job] retrieve thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:40,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-16 12:17:43] 2026-04-16 10:16:40,144 | INFO     | [job] job monitor thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:40,239 | INFO     | all job control threads have been joined
[2026-04-16 12:17:43] 2026-04-16 10:16:40,398 | INFO     | all payload control threads have been joined
[2026-04-16 12:17:43] 2026-04-16 10:16:40,450 | INFO     | [payload] validate_pre thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:40,451 | INFO     | [payload] validate_post thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:40,673 | INFO     | [data] copytool_in thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:40,941 | INFO     | [data] control thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:40,944 | INFO     | [data] copytool_out thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,098 | INFO     | [job] validate thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,244 | INFO     | [job] control thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,300 | INFO     | [job] create_data_payload thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,395 | INFO     | [payload] execute_payloads thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,404 | INFO     | [payload] control thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,530 | INFO     | [payload] failed_post thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:41,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-16 12:17:43] 2026-04-16 10:16:42,909 | INFO     | [job] queue monitor thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:44,059 | INFO     | [data] queue_monitor thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:16:49,854 | INFO     | job.realtimelogging is not enabled
[2026-04-16 12:17:43] 2026-04-16 10:16:50,860 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-16 12:17:43] 2026-04-16 10:17:09,333 | INFO     | PID=1091404 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-16 12:17:43] 2026-04-16 10:17:09,333 | INFO     | .. there are 4 such processes running
[2026-04-16 12:17:43] 2026-04-16 10:17:09,334 | INFO     | found 0 job(s) in 20 queues
[2026-04-16 12:17:43] 2026-04-16 10:17:09,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-16 12:17:43] 2026-04-16 10:17:09,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-16 12:17:43] 2026-04-16 10:17:36,661 | INFO     | [monitor] cgroup control has ended
[2026-04-16 12:17:43] 2026-04-16 10:17:37,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22604865709888)>', '<ExcThread(monitor, started 22604544993024)>']
[2026-04-16 12:17:43] 2026-04-16 10:17:38,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-16 12:17:43] 2026-04-16 10:17:38,479 | INFO     | [monitor] control thread has ended
[2026-04-16 12:17:43] 2026-04-16 10:17:42,989 | INFO     | all workflow threads have been joined
[2026-04-16 12:17:43] 2026-04-16 10:17:42,989 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-16 12:17:43] 2026-04-16 10:17:42,989 | INFO     | traces error code: 0
[2026-04-16 12:17:43] 2026-04-16 10:17:42,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-16 12:17:43] 2026-04-16 10:17:43,078 [wrapper] ==== pilot stdout END ====
[2026-04-16 12:17:43] 2026-04-16 10:17:43,080 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-16 12:17:43] 2026-04-16 10:17:43,082 [wrapper] pilotpid: 1091404
[2026-04-16 12:17:43] 2026-04-16 10:17:43,083 [wrapper] Pilot exit status: 0
[2026-04-16 12:17:43] 2026-04-16 10:17:43,091 [wrapper] pandaids: 7089566860
[2026-04-16 12:17:43] 2026-04-16 10:17:43,138 [wrapper] cleanup supervisor_pilot 1192421 1091405
[2026-04-16 12:17:43] 2026-04-16 10:17:43,139 [wrapper] Test setup, not cleaning
[2026-04-16 12:17:43] 2026-04-16 10:17:43,141 [wrapper] apfmon messages muted
[2026-04-16 12:17:43] 2026-04-16 10:17:43,143 [wrapper] ==== wrapper stdout END ====
[2026-04-16 12:17:43] 2026-04-16 10:17:43,145 [wrapper] ==== wrapper stderr END ====
[2026-04-16 12:17:43]  *** Error codes and diagnostics ***
[2026-04-16 12:17:43]     "exeErrorCode": 0,
[2026-04-16 12:17:43]     "pilotErrorCode": 0,
[2026-04-16 12:17:43]  *** Listing of results directory ***
[2026-04-16 12:17:43] total 422740
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc    644190 Apr 13 16:51 pilot3.tar.gz
[2026-04-16 12:17:43] -rwx------. 1 boinc boinc     36322 Apr 13 16:53 runpilot2-wrapper.sh
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc      5094 Apr 13 16:58 queuedata.json
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc       100 Apr 16 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-16 12:17:43] -rwxr-xr-x. 1 boinc boinc      7986 Apr 16 09:54 run_atlas
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc       105 Apr 16 09:54 job.xml
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc      6480 Apr 16 09:54 init_data.xml
[2026-04-16 12:17:43] -rw-r--r--. 2 boinc boinc 224430688 Apr 16 09:54 EVNT.48629115._000630.pool.root.1
[2026-04-16 12:17:43] -rw-r--r--. 2 boinc boinc     15665 Apr 16 09:54 start_atlas.sh
[2026-04-16 12:17:43] drwxrwx--x. 2 boinc boinc      4096 Apr 16 09:54 shared
[2026-04-16 12:17:43] -rw-r--r--. 2 boinc boinc    656945 Apr 16 09:54 input.tar.gz
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc         0 Apr 16 09:54 boinc_lockfile
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc      2628 Apr 16 09:54 pandaJob.out
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc    996749 Apr 16 09:54 agis_schedconf.cvmfs.json
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc   1511633 Apr 16 09:54 agis_ddmendpoints.agis.ALL.json
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc       452 Apr 16 09:54 workernode_map.json
[2026-04-16 12:17:43] drwx------. 5 boinc boinc      4096 Apr 16 09:54 pilot3
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc 202213019 Apr 16 12:16 HITS.49645815._015767.pool.root.1
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc       487 Apr 16 12:16 boinc_task_state.xml
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc      1031 Apr 16 12:16 memory_monitor_summary.json
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc    270402 Apr 16 12:16 log.49645815._015767.job.log.tgz.1
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc      6420 Apr 16 12:16 heartbeat_new.json
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc      6311 Apr 16 12:16 heartbeat.json
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc        95 Apr 16 12:17 pilot_heartbeat.json
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc        27 Apr 16 12:17 wrapper_checkpoint.txt
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc      8192 Apr 16 12:17 boinc_mmap_file
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc      5085 Apr 16 12:17 pilotlog.txt
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc    821667 Apr 16 12:17 log.49645815._015767.job.log.1
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc       357 Apr 16 12:17 output.list
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc       410 Apr 16 12:17 runtime_log
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc   1105920 Apr 16 12:17 result.tar.gz
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc      8826 Apr 16 12:17 runtime_log.err
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc       661 Apr 16 12:17 034ff9814beb.diag
[2026-04-16 12:17:43] -rw-r--r--. 1 boinc boinc     20778 Apr 16 12:17 stderr.txt
[2026-04-16 12:17:43] HITS file was successfully produced:
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc 202213019 Apr 16 12:16 shared/HITS.pool.root.1
[2026-04-16 12:17:43]  *** Contents of shared directory: ***
[2026-04-16 12:17:43] total 418396
[2026-04-16 12:17:43] -rw-r--r--. 2 boinc boinc 224430688 Apr 16 09:54 ATLAS.root_0
[2026-04-16 12:17:43] -rw-r--r--. 2 boinc boinc     15665 Apr 16 09:54 start_atlas.sh
[2026-04-16 12:17:43] -rw-r--r--. 2 boinc boinc    656945 Apr 16 09:54 input.tar.gz
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc 202213019 Apr 16 12:16 HITS.pool.root.1
[2026-04-16 12:17:43] -rw-------. 1 boinc boinc   1105920 Apr 16 12:17 result.tar.gz
12:17:44 (1087585): run_atlas exited; CPU time 33083.777152
12:17:44 (1087585): called boinc_finish(0)

</stderr_txt>
]]>

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