Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:04:50 (8805): wrapper (7.7.26015): starting
15:04:50 (8805): wrapper: running run_atlas (--nthreads 8)
[2026-04-14 15:04:50] Arguments: --nthreads 8
[2026-04-14 15:04:50] Threads: 8
[2026-04-14 15:04:50] Checking for CVMFS
[2026-04-14 15:04:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 15:04:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 15:04:51] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 15:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 15:04:53] 2.11.2.0 16988 18686 99996 158452 1 55 20964608 25165825 899 130560 0 7421713 99.955 1765596 2879 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-14 15:04:53] CVMFS is ok
[2026-04-14 15:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 15:04:53] Checking for apptainer binary...
[2026-04-14 15:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 15:04:53] Running /usr/bin/apptainer --version
[2026-04-14 15:04:53] apptainer version 1.3.2-1.el7
[2026-04-14 15:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 15:05:16] cg-vwn418.simple-grid.lan
[2026-04-14 15:05:16] apptainer works
[2026-04-14 15:05:17] Set ATHENA_PROC_NUMBER=8
[2026-04-14 15:05:17] Set ATHENA_CORE_NUMBER=8
[2026-04-14 15:05:17] Starting ATLAS job with PandaID=7091953680
[2026-04-14 15:05:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 18:29:53]  *** The last 200 lines of the pilot log: ***
[2026-04-14 18:29:53] 2026-04-14 16:28:55,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,164 | INFO     | log transfer has been attempted: DONE
[2026-04-14 18:29:53] 2026-04-14 16:28:55,164 | INFO     | job 7091953680 has finished - writing final server update
[2026-04-14 18:29:53] 2026-04-14 16:28:55,164 | INFO     | total number of processed events: 400 (read)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,166 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7091953680/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,167 | INFO     | extracted standard info from prmon json
[2026-04-14 18:29:53] 2026-04-14 16:28:55,167 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 18:29:53] 2026-04-14 16:28:55,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 18:29:53] 2026-04-14 16:28:55,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 18:29:53] 2026-04-14 16:28:55,172 | INFO     | fitting pss+swap vs Time
[2026-04-14 18:29:53] 2026-04-14 16:28:55,172 | INFO     | sum of square deviations: 2093397390.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,174 | INFO     | sum of deviations: 55789235124.999985
[2026-04-14 18:29:53] 2026-04-14 16:28:55,174 | INFO     | mean x (centered): 0.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,174 | INFO     | mean y: 2512223.3174603176
[2026-04-14 18:29:53] 2026-04-14 16:28:55,174 | INFO     | intersect: 2512223.3174603176
[2026-04-14 18:29:53] 2026-04-14 16:28:55,174 | INFO     | chi2: 9.563335626338116
[2026-04-14 18:29:53] 2026-04-14 16:28:55,175 | INFO     | sum of square deviations: 1931608310.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,176 | INFO     | sum of deviations: 68786748820.00002
[2026-04-14 18:29:53] 2026-04-14 16:28:55,176 | INFO     | mean x (centered): 0.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,177 | INFO     | mean y: 2524206.2065217393
[2026-04-14 18:29:53] 2026-04-14 16:28:55,177 | INFO     | intersect: 2524206.2065217393
[2026-04-14 18:29:53] 2026-04-14 16:28:55,177 | INFO     | chi2: 8.823651756785702
[2026-04-14 18:29:53] 2026-04-14 16:28:55,177 | INFO     | current chi2=8.823651756785702 (change=7.734580260001237 %)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,177 | INFO     | right removable region: 183
[2026-04-14 18:29:53] 2026-04-14 16:28:55,178 | INFO     | sum of square deviations: 1931608310.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,179 | INFO     | sum of deviations: -12402375918.000011
[2026-04-14 18:29:53] 2026-04-14 16:28:55,179 | INFO     | mean x (centered): 0.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,179 | INFO     | mean y: 2576454.413043478
[2026-04-14 18:29:53] 2026-04-14 16:28:55,179 | INFO     | intersect: 2576454.413043478
[2026-04-14 18:29:53] 2026-04-14 16:28:55,180 | INFO     | chi2: 4.164367727420484
[2026-04-14 18:29:53] 2026-04-14 16:28:55,180 | INFO     | current chi2=4.164367727420484 (change=56.45486167032019 %)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,180 | INFO     | sum of square deviations: 1778377530.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,182 | INFO     | sum of deviations: -64692812388.00001
[2026-04-14 18:29:53] 2026-04-14 16:28:55,182 | INFO     | mean x (centered): 0.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,182 | INFO     | mean y: 2628414.9553072625
[2026-04-14 18:29:53] 2026-04-14 16:28:55,182 | INFO     | intersect: 2628414.9553072625
[2026-04-14 18:29:53] 2026-04-14 16:28:55,182 | INFO     | chi2: 1.2113834078560992
[2026-04-14 18:29:53] 2026-04-14 16:28:55,182 | INFO     | current chi2=1.2113834078560992 (change=70.91074835011122 %)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,183 | INFO     | sum of square deviations: 1633472487.5
[2026-04-14 18:29:53] 2026-04-14 16:28:55,184 | INFO     | sum of deviations: -72600945108.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,184 | INFO     | mean x (centered): 0.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,184 | INFO     | mean y: 2636629.3448275863
[2026-04-14 18:29:53] 2026-04-14 16:28:55,184 | INFO     | intersect: 2636629.3448275863
[2026-04-14 18:29:53] 2026-04-14 16:28:55,185 | INFO     | chi2: 1.0273456870309918
[2026-04-14 18:29:53] 2026-04-14 16:28:55,185 | INFO     | current chi2=1.0273456870309918 (change=15.19235938279991 %)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,185 | INFO     | left removable region: 15
[2026-04-14 18:29:53] 2026-04-14 16:28:55,185 | INFO     | sum of square deviations: 1470248962.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,186 | INFO     | sum of deviations: -56739663559.00001
[2026-04-14 18:29:53] 2026-04-14 16:28:55,187 | INFO     | mean x (centered): 0.0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,187 | INFO     | mean y: 2654016.273809524
[2026-04-14 18:29:53] 2026-04-14 16:28:55,187 | INFO     | intersect: 2654016.273809524
[2026-04-14 18:29:53] 2026-04-14 16:28:55,187 | INFO     | chi2: 0.14598149567764115
[2026-04-14 18:29:53] 2026-04-14 16:28:55,187 | INFO     | current memory leak: -38.59 B/s (using 168 data points, chi2=0.15)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,188 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,188 | INFO     | ..............................
[2026-04-14 18:29:53] 2026-04-14 16:28:55,188 | INFO     | . Timing measurements:
[2026-04-14 18:29:53] 2026-04-14 16:28:55,188 | INFO     | . get job = 0 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,188 | INFO     | . initial setup = 119 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,189 | INFO     | . payload setup = 176 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,189 | INFO     | . stage-in = 0 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,189 | INFO     | . payload execution = 11654 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,189 | INFO     | . stage-out = 2 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,189 | INFO     | . log creation = 1 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,189 | INFO     | ..............................
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | 
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | job summary report
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | --------------------------------------------------
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | PanDA job id: 7091953680
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | task id: 49545114
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | errors: (none)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 18:29:53] 2026-04-14 16:28:55,310 | INFO     | pilot state: finished 
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | transexitcode: 0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | exeerrorcode: 0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | exeerrordiag: 
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | exitcode: 0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | exitmsg: OK
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | cpuconsumptiontime: 43018 s
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | nevents: 400
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | neventsw: 0
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | pid: 17260
[2026-04-14 18:29:53] 2026-04-14 16:28:55,311 | INFO     | pgrp: 17260
[2026-04-14 18:29:53] 2026-04-14 16:28:55,312 | INFO     | corecount: 8
[2026-04-14 18:29:53] 2026-04-14 16:28:55,312 | INFO     | event service: False
[2026-04-14 18:29:53] 2026-04-14 16:28:55,312 | INFO     | sizes: {0: 2279084, 1: 2280142, 2: 2281598, 12: 2281598, 11835: 2311019, 11838: 2320017, 11841: 2320395}
[2026-04-14 18:29:53] 2026-04-14 16:28:55,312 | INFO     | --------------------------------------------------
[2026-04-14 18:29:53] 2026-04-14 16:28:55,312 | INFO     | 
[2026-04-14 18:29:53] 2026-04-14 16:28:55,312 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-04-14 18:29:53] 2026-04-14 16:28:55,771 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,771 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,771 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,771 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | job 7091953680 has completed (purged errors)
[2026-04-14 18:29:53] 2026-04-14 16:28:55,773 | INFO     | overall cleanup function is called
[2026-04-14 18:29:53] 2026-04-14 16:28:56,787 | INFO     | --- collectZombieJob: --- 10, [17260]
[2026-04-14 18:29:53] 2026-04-14 16:28:56,787 | INFO     | zombie collector waiting for pid 17260
[2026-04-14 18:29:53] 2026-04-14 16:28:56,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 18:29:53] 2026-04-14 16:28:56,788 | INFO     | collected zombie processes
[2026-04-14 18:29:53] 2026-04-14 16:28:56,788 | INFO     | will attempt to kill all subprocesses of pid=17260
[2026-04-14 18:29:53] 2026-04-14 16:28:56,854 | INFO     | process IDs to be killed: [17260] (in reverse order)
[2026-04-14 18:29:53] 2026-04-14 16:28:57,758 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 18:29:53] 2026-04-14 16:28:57,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 18:29:53] 2026-04-14 16:28:57,761 | INFO     | did not find any defunct processes belonging to 17260
[2026-04-14 18:29:53] 2026-04-14 16:28:57,762 | INFO     | did not find any defunct processes belonging to 17260
[2026-04-14 18:29:53] 2026-04-14 16:28:57,762 | INFO     | Ready for new job
[2026-04-14 18:29:53] 2026-04-14 16:28:57,764 | INFO     | **************************************
[2026-04-14 18:29:53] 2026-04-14 16:28:57,764 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 18:29:53] 2026-04-14 16:28:57,764 | INFO     | **************************************
[2026-04-14 18:29:53] 2026-04-14 16:28:57,764 | INFO     | 
[2026-04-14 18:29:53] 2026-04-14 16:28:57,765 | INFO     | pilot is running in a VM
[2026-04-14 18:29:53] 2026-04-14 16:28:57,765 | INFO     | architecture information:
[2026-04-14 18:29:53] 2026-04-14 16:28:57,765 | INFO     | executing command: cat /etc/os-release
[2026-04-14 18:29:53] 2026-04-14 16:28:58,029 | INFO     | cat /etc/os-release:
[2026-04-14 18:29:53] NAME="CentOS Linux"
[2026-04-14 18:29:53] VERSION="7 (Core)"
[2026-04-14 18:29:53] ID="centos"
[2026-04-14 18:29:53] ID_LIKE="rhel fedora"
[2026-04-14 18:29:53] VERSION_ID="7"
[2026-04-14 18:29:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 18:29:53] ANSI_COLOR="0;31"
[2026-04-14 18:29:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 18:29:53] HOME_URL="https://www.centos.org/"
[2026-04-14 18:29:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 18:29:53] 
[2026-04-14 18:29:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 18:29:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 18:29:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 18:29:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 18:29:53] 
[2026-04-14 18:29:53] 2026-04-14 16:28:58,030 | INFO     | **************************************
[2026-04-14 18:29:53] 2026-04-14 16:28:58,533 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-04-14 18:29:53] 2026-04-14 16:28:58,739 | INFO     | sufficient remaining disk space (497177067520 B)
[2026-04-14 18:29:53] 2026-04-14 16:28:58,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 18:29:53] 2026-04-14 16:28:58,739 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 18:29:53] 2026-04-14 16:28:58,739 | INFO     | update_server=False
[2026-04-14 18:29:53] 2026-04-14 16:28:58,739 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 18:29:53] 2026-04-14 16:28:58,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 18:29:53] 2026-04-14 16:28:58,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 18:29:53] 2026-04-14 16:28:58,740 | INFO     | aborting loop
[2026-04-14 18:29:53] 2026-04-14 16:28:59,181 | INFO     | all data control threads have been joined
[2026-04-14 18:29:53] 2026-04-14 16:28:59,485 | INFO     | all payload control threads have been joined
[2026-04-14 18:29:53] 2026-04-14 16:28:59,745 | INFO     | [job] retrieve thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:28:59,746 | INFO     | [job] job monitor thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:28:59,769 | INFO     | [payload] validate_post thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:28:59,869 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:28:59,903 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:28:59,920 | INFO     | all job control threads have been joined
[2026-04-14 18:29:53] 2026-04-14 16:29:00,187 | INFO     | [data] control thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:00,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 18:29:53] 2026-04-14 16:29:00,400 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:00,451 | INFO     | [data] copytool_in thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:00,491 | INFO     | [payload] control thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:00,746 | INFO     | [data] copytool_out thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:00,929 | INFO     | [job] control thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:00,985 | INFO     | [job] validate thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:01,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 18:29:53] 2026-04-14 16:29:01,215 | INFO     | [payload] failed_post thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:01,331 | INFO     | [job] queue monitor thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:05,176 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:09,380 | INFO     | job.realtimelogging is not enabled
[2026-04-14 18:29:53] 2026-04-14 16:29:10,386 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 18:29:53] 2026-04-14 16:29:28,434 | INFO     | PID=12774 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-14 18:29:53] 2026-04-14 16:29:28,434 | INFO     | .. there are 2 such processes running
[2026-04-14 18:29:53] 2026-04-14 16:29:28,435 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 18:29:53] 2026-04-14 16:29:28,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 18:29:53] 2026-04-14 16:29:28,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 18:29:53] 2026-04-14 16:29:41,338 | INFO     | [monitor] cgroup control has ended
[2026-04-14 18:29:53] 2026-04-14 16:29:42,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457373894464)>', '<ExcThread(monitor, started 140456922945280)>']
[2026-04-14 18:29:53] 2026-04-14 16:29:42,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 18:29:53] 2026-04-14 16:29:42,517 | INFO     | [monitor] control thread has ended
[2026-04-14 18:29:53] 2026-04-14 16:29:47,389 | INFO     | all workflow threads have been joined
[2026-04-14 18:29:53] 2026-04-14 16:29:47,389 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 18:29:53] 2026-04-14 16:29:47,390 | INFO     | traces error code: 0
[2026-04-14 18:29:53] 2026-04-14 16:29:47,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 18:29:53] 2026-04-14 16:29:47,821 [wrapper] ==== pilot stdout END ====
[2026-04-14 18:29:53] 2026-04-14 16:29:47,933 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 18:29:53] 2026-04-14 16:29:48,044 [wrapper] pilotpid: 12774
[2026-04-14 18:29:53] 2026-04-14 16:29:48,161 [wrapper] Pilot exit status: 0
[2026-04-14 18:29:53] 2026-04-14 16:29:48,559 [wrapper] pandaids: 7091953680
[2026-04-14 18:29:53] 2026-04-14 16:29:49,556 [wrapper] cleanup supervisor_pilot 22906 12775
[2026-04-14 18:29:53] 2026-04-14 16:29:49,668 [wrapper] Test setup, not cleaning
[2026-04-14 18:29:53] 2026-04-14 16:29:49,769 [wrapper] apfmon messages muted
[2026-04-14 18:29:53] 2026-04-14 16:29:49,863 [wrapper] ==== wrapper stdout END ====
[2026-04-14 18:29:53] 2026-04-14 16:29:49,960 [wrapper] ==== wrapper stderr END ====
[2026-04-14 18:29:53]  *** Error codes and diagnostics ***
[2026-04-14 18:29:53]     "exeErrorCode": 0,
[2026-04-14 18:29:53]     "pilotErrorCode": 0,
[2026-04-14 18:29:53]  *** Listing of results directory ***
[2026-04-14 18:29:53] total 465600
[2026-04-14 18:29:53] -rwx------. 1 boinc boinc     36322 Apr 13 21:40 runpilot2-wrapper.sh
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc    644190 Apr 13 21:41 pilot3.tar.gz
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc      5094 Apr 13 21:44 queuedata.json
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc       100 Apr 14 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 18:29:53] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 15:04 run_atlas
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc       105 Apr 14 15:04 job.xml
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc      6307 Apr 14 15:04 init_data.xml
[2026-04-14 18:29:53] -rw-r--r--. 2 boinc boinc 280038147 Apr 14 15:04 EVNT.49539591._000001.pool.root.1
[2026-04-14 18:29:53] -rw-r--r--. 2 boinc boinc     15665 Apr 14 15:04 start_atlas.sh
[2026-04-14 18:29:53] drwxrwx--x. 2 boinc boinc        68 Apr 14 15:04 shared
[2026-04-14 18:29:53] -rw-r--r--. 2 boinc boinc    656925 Apr 14 15:04 input.tar.gz
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc         0 Apr 14 15:04 boinc_lockfile
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc      2596 Apr 14 15:05 pandaJob.out
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc       415 Apr 14 15:11 workernode_map.json
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc    997527 Apr 14 15:11 agis_schedconf.cvmfs.json
[2026-04-14 18:29:53] drwx------. 5 boinc boinc      4096 Apr 14 15:11 pilot3
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc 189715119 Apr 14 18:27 HITS.49545114._000016.pool.root.1
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc       489 Apr 14 18:27 boinc_task_state.xml
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc      1012 Apr 14 18:28 memory_monitor_summary.json
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc        95 Apr 14 18:28 pilot_heartbeat.json
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc   1511579 Apr 14 18:28 agis_ddmendpoints.agis.ALL.json
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc    374001 Apr 14 18:28 log.49545114._000016.job.log.tgz.1
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc      6327 Apr 14 18:28 heartbeat_new.json
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc      6218 Apr 14 18:28 heartbeat.json
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc      8192 Apr 14 18:29 boinc_mmap_file
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc        28 Apr 14 18:29 wrapper_checkpoint.txt
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc      4951 Apr 14 18:29 pilotlog.txt
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc   1110690 Apr 14 18:29 log.49545114._000016.job.log.1
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc       357 Apr 14 18:29 output.list
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc       410 Apr 14 18:29 runtime_log
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc   1505280 Apr 14 18:29 result.tar.gz
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc      8438 Apr 14 18:29 runtime_log.err
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc       656 Apr 14 18:29 46c884199da3.diag
[2026-04-14 18:29:53] -rw-r--r--. 1 boinc boinc     20555 Apr 14 18:29 stderr.txt
[2026-04-14 18:29:53] HITS file was successfully produced:
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc 189715119 Apr 14 18:27 shared/HITS.pool.root.1
[2026-04-14 18:29:53]  *** Contents of shared directory: ***
[2026-04-14 18:29:53] total 460880
[2026-04-14 18:29:53] -rw-r--r--. 2 boinc boinc 280038147 Apr 14 15:04 ATLAS.root_0
[2026-04-14 18:29:53] -rw-r--r--. 2 boinc boinc     15665 Apr 14 15:04 start_atlas.sh
[2026-04-14 18:29:53] -rw-r--r--. 2 boinc boinc    656925 Apr 14 15:04 input.tar.gz
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc 189715119 Apr 14 18:27 HITS.pool.root.1
[2026-04-14 18:29:53] -rw-------. 1 boinc boinc   1505280 Apr 14 18:29 result.tar.gz
18:29:54 (8805): run_atlas exited; CPU time 43113.506664
18:29:54 (8805): called boinc_finish(0)

</stderr_txt>
]]>

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