Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:27:57 (2970507): wrapper (7.7.26015): starting
11:27:57 (2970507): wrapper: running run_atlas (--nthreads 3)
[2026-04-14 11:27:57] Arguments: --nthreads 3
[2026-04-14 11:27:57] Threads: 3
[2026-04-14 11:27:57] Checking for CVMFS
[2026-04-14 11:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 11:27:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 11:27:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 11:27:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 11:27:58] 2.9.2.0 2104384 5497 84856 158447 0 50 25701093 36864000 0 130560 0 3299366 99.989 204582 13465 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-14 11:27:58] CVMFS is ok
[2026-04-14 11:27:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 11:27:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 11:27:58] Further information can be found at the LHC@home message board.
[2026-04-14 11:27:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 11:27:58] Checking for apptainer binary...
[2026-04-14 11:27:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 11:27:58] Running /usr/bin/apptainer --version
[2026-04-14 11:27:58] apptainer version 1.4.1-1.1
[2026-04-14 11:27:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 11:27:58] thA385
[2026-04-14 11:27:58] apptainer works
[2026-04-14 11:27:58] Set ATHENA_PROC_NUMBER=3
[2026-04-14 11:27:58] Set ATHENA_CORE_NUMBER=3
[2026-04-14 11:27:58] Starting ATLAS job with PandaID=7089749456
[2026-04-14 11:27:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 12:51:21]  *** The last 200 lines of the pilot log: ***
[2026-04-14 12:51:21] 2026-04-14 10:50:33,400 | INFO     | architecture information:
[2026-04-14 12:51:21] 2026-04-14 10:50:33,400 | INFO     | executing command: cat /etc/os-release
[2026-04-14 12:51:21] 2026-04-14 10:50:33,410 | INFO     | cat /etc/os-release:
[2026-04-14 12:51:21] NAME="CentOS Linux"
[2026-04-14 12:51:21] VERSION="7 (Core)"
[2026-04-14 12:51:21] ID="centos"
[2026-04-14 12:51:21] ID_LIKE="rhel fedora"
[2026-04-14 12:51:21] VERSION_ID="7"
[2026-04-14 12:51:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 12:51:21] ANSI_COLOR="0;31"
[2026-04-14 12:51:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 12:51:21] HOME_URL="https://www.centos.org/"
[2026-04-14 12:51:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 12:51:21] 
[2026-04-14 12:51:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 12:51:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 12:51:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 12:51:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 12:51:21] 
[2026-04-14 12:51:21] 2026-04-14 10:50:33,410 | INFO     | **************************************
[2026-04-14 12:51:21] 2026-04-14 10:50:33,913 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-14 12:51:21] 2026-04-14 10:50:33,926 | INFO     | sufficient remaining disk space (380806103040 B)
[2026-04-14 12:51:21] 2026-04-14 10:50:33,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 12:51:21] 2026-04-14 10:50:33,927 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 12:51:21] 2026-04-14 10:50:33,927 | INFO     | update_server=False
[2026-04-14 12:51:21] 2026-04-14 10:50:33,927 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 12:51:21] 2026-04-14 10:50:33,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 12:51:21] 2026-04-14 10:50:33,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 12:51:21] 2026-04-14 10:50:34,011 | INFO     | all job control threads have been joined
[2026-04-14 12:51:21] 2026-04-14 10:50:34,310 | INFO     | all data control threads have been joined
[2026-04-14 12:51:21] 2026-04-14 10:50:34,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 12:51:21] 2026-04-14 10:50:34,435 | INFO     | aborting loop
[2026-04-14 12:51:21] 2026-04-14 10:50:34,544 | INFO     | all payload control threads have been joined
[2026-04-14 12:51:21] 2026-04-14 10:50:34,932 | INFO     | [job] retrieve thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:34,933 | INFO     | [job] queue monitor thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,017 | INFO     | [job] control thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,062 | INFO     | [data] copytool_in thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,312 | INFO     | [data] control thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,440 | INFO     | [job] job monitor thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,525 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,550 | INFO     | [payload] control thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,627 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,902 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:35,933 | INFO     | [data] copytool_out thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:36,014 | INFO     | [payload] validate_post thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:36,250 | INFO     | [job] validate thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:36,448 | INFO     | [payload] failed_post thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:50:36,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 12:51:21] 2026-04-14 10:50:40,702 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 12:51:21] 2026-04-14 10:51:02,974 | INFO     | 4947s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-14 12:51:21] 2026-04-14 10:51:04,037 | INFO     | PID=2974556 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 12:51:21] 2026-04-14 10:51:04,037 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 12:51:21] 2026-04-14 10:51:04,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 12:51:21] 2026-04-14 10:51:04,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 12:51:21] 2026-04-14 10:51:15,075 | INFO     | [monitor] cgroup control has ended
[2026-04-14 12:51:21] 2026-04-14 10:51:16,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475110250304)>', '<ExcThread(monitor, started 140474471929600)>']
[2026-04-14 12:51:21] 2026-04-14 10:51:16,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 12:51:21] 2026-04-14 10:51:16,095 | INFO     | [monitor] control thread has ended
[2026-04-14 12:51:21] 2026-04-14 10:51:21,107 | INFO     | all workflow threads have been joined
[2026-04-14 12:51:21] 2026-04-14 10:51:21,107 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 12:51:21] 2026-04-14 10:51:21,107 | INFO     | traces error code: 0
[2026-04-14 12:51:21] 2026-04-14 10:51:21,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 12:51:21] 2026-04-14 10:51:21,157 [wrapper] ==== pilot stdout END ====
[2026-04-14 12:51:21] 2026-04-14 10:51:21,160 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 12:51:21] 2026-04-14 10:51:21,162 [wrapper] pilotpid: 2974556
[2026-04-14 12:51:21] 2026-04-14 10:51:21,165 [wrapper] Pilot exit status: 0
[2026-04-14 12:51:21] 2026-04-14 10:51:21,173 [wrapper] pandaids: 7089749456
[2026-04-14 12:51:21] 2026-04-14 10:51:21,191 [wrapper] cleanup supervisor_pilot 2984517 2974557
[2026-04-14 12:51:21] 2026-04-14 10:51:21,193 [wrapper] Test setup, not cleaning
[2026-04-14 12:51:21] 2026-04-14 10:51:21,196 [wrapper] apfmon messages muted
[2026-04-14 12:51:21] 2026-04-14 10:51:21,198 [wrapper] ==== wrapper stdout END ====
[2026-04-14 12:51:21] 2026-04-14 10:51:21,201 [wrapper] ==== wrapper stderr END ====
[2026-04-14 12:51:21]  *** Error codes and diagnostics ***
[2026-04-14 12:51:21]     "exeErrorCode": 0,
[2026-04-14 12:51:21]     "pilotErrorCode": 0,
[2026-04-14 12:51:21]  *** Listing of results directory ***
[2026-04-14 12:51:21] total 416136
[2026-04-14 12:51:21] -rwx------ 1 boinc boinc     36322 Apr 13 21:38 runpilot2-wrapper.sh
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc      5094 Apr 13 21:39 queuedata.json
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc    644190 Apr 13 21:41 pilot3.tar.gz
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc       100 Apr 14 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 12:51:21] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 11:27 run_atlas
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc       105 Apr 14 11:27 job.xml
[2026-04-14 12:51:21] -rw-r--r-- 2 boinc boinc 226277134 Apr 14 11:27 EVNT.49263198._001949.pool.root.1
[2026-04-14 12:51:21] -rw-r--r-- 2 boinc boinc    656927 Apr 14 11:27 input.tar.gz
[2026-04-14 12:51:21] -rw-r--r-- 2 boinc boinc     15665 Apr 14 11:27 start_atlas.sh
[2026-04-14 12:51:21] drwxrwx--x 2 boinc boinc      4096 Apr 14 11:27 shared
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc         0 Apr 14 11:27 boinc_setup_complete
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc      6361 Apr 14 11:27 init_data.xml
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc         0 Apr 14 11:27 boinc_lockfile
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc      2576 Apr 14 11:27 pandaJob.out
[2026-04-14 12:51:21] -rw------- 1 boinc boinc    997527 Apr 14 11:28 agis_schedconf.cvmfs.json
[2026-04-14 12:51:21] -rw------- 1 boinc boinc   1511579 Apr 14 11:28 agis_ddmendpoints.agis.ALL.json
[2026-04-14 12:51:21] -rw------- 1 boinc boinc       423 Apr 14 11:28 workernode_map.json
[2026-04-14 12:51:21] drwx------ 5 boinc boinc      4096 Apr 14 11:28 pilot3
[2026-04-14 12:51:21] -rw------- 1 boinc boinc 194362313 Apr 14 12:50 HITS.49263200._067174.pool.root.1
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc       487 Apr 14 12:50 boinc_task_state.xml
[2026-04-14 12:51:21] -rw------- 1 boinc boinc      1018 Apr 14 12:50 memory_monitor_summary.json
[2026-04-14 12:51:21] -rw------- 1 boinc boinc        95 Apr 14 12:50 pilot_heartbeat.json
[2026-04-14 12:51:21] -rw------- 1 boinc boinc    230678 Apr 14 12:50 log.49263200._067174.job.log.tgz.1
[2026-04-14 12:51:21] -rw------- 1 boinc boinc      6321 Apr 14 12:50 heartbeat_new.json
[2026-04-14 12:51:21] -rw------- 1 boinc boinc      6212 Apr 14 12:50 heartbeat.json
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc      8192 Apr 14 12:50 boinc_mmap_file
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc        27 Apr 14 12:50 wrapper_checkpoint.txt
[2026-04-14 12:51:21] -rw------- 1 boinc boinc      4862 Apr 14 12:51 pilotlog.txt
[2026-04-14 12:51:21] -rw------- 1 boinc boinc    484321 Apr 14 12:51 log.49263200._067174.job.log.1
[2026-04-14 12:51:21] -rw------- 1 boinc boinc       357 Apr 14 12:51 output.list
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc       410 Apr 14 12:51 runtime_log
[2026-04-14 12:51:21] -rw------- 1 boinc boinc    737280 Apr 14 12:51 result.tar.gz
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc      8518 Apr 14 12:51 runtime_log.err
[2026-04-14 12:51:21] -rw------- 1 boinc boinc       657 Apr 14 12:51 46442e668ba3.diag
[2026-04-14 12:51:21] -rw-r--r-- 1 boinc boinc      9012 Apr 14 12:51 stderr.txt
[2026-04-14 12:51:21] HITS file was successfully produced:
[2026-04-14 12:51:21] -rw------- 1 boinc boinc 194362313 Apr 14 12:50 shared/HITS.pool.root.1
[2026-04-14 12:51:21]  *** Contents of shared directory: ***
[2026-04-14 12:51:21] total 412172
[2026-04-14 12:51:21] -rw-r--r-- 2 boinc boinc 226277134 Apr 14 11:27 ATLAS.root_0
[2026-04-14 12:51:21] -rw-r--r-- 2 boinc boinc    656927 Apr 14 11:27 input.tar.gz
[2026-04-14 12:51:21] -rw-r--r-- 2 boinc boinc     15665 Apr 14 11:27 start_atlas.sh
[2026-04-14 12:51:21] -rw------- 1 boinc boinc 194362313 Apr 14 12:50 HITS.pool.root.1
[2026-04-14 12:51:21] -rw------- 1 boinc boinc    737280 Apr 14 12:51 result.tar.gz
12:51:22 (2970507): run_atlas exited; CPU time 13879.549707
12:51:22 (2970507): called boinc_finish(0)

</stderr_txt>
]]>

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