Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
00:56:40 (1710708): wrapper (7.7.26015): starting
00:56:40 (1710708): wrapper: running run_atlas (--nthreads 4)
[2026-04-16 00:56:40] Arguments: --nthreads 4
[2026-04-16 00:56:40] Threads: 4
[2026-04-16 00:56:40] Checking for CVMFS
[2026-04-16 00:56:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-16 00:56:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-16 00:56:41] Running cvmfs_config stat atlas.cern.ch
[2026-04-16 00:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-16 00:56:41] 2.13.3.0 2579410 10273 56368 158508 2 50 2533983 4096000 917 130560 0 7516833 99.892 1174777 1641 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 1
[2026-04-16 00:56:41] CVMFS is ok
[2026-04-16 00:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-16 00:56:41] Checking for apptainer binary...
[2026-04-16 00:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-16 00:56:41] Running /usr/bin/apptainer --version
[2026-04-16 00:56:41] apptainer version 1.4.5
[2026-04-16 00:56:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-16 00:56:41] TC-910
[2026-04-16 00:56:41] apptainer works
[2026-04-16 00:56:41] Set ATHENA_PROC_NUMBER=4
[2026-04-16 00:56:41] Set ATHENA_CORE_NUMBER=4
[2026-04-16 00:56:41] Starting ATLAS job with PandaID=7083273836
[2026-04-16 00:56:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-16 05:50:28]  *** The last 200 lines of the pilot log: ***
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | sum of deviations: -7761403137.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | mean y: 2391296.5759717315
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | intersect: 2391296.5759717315
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | chi2: 1.2739035117860578
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | current chi2=1.2739035117860578 (change=0.16312828696087278 %)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,270 | INFO     | right removable region: 282
[2026-04-16 05:50:28] 2026-04-16 03:49:31,271 | INFO     | sum of square deviations: 7028008982.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,272 | INFO     | sum of deviations: -28127340339.999996
[2026-04-16 05:50:28] 2026-04-16 03:49:31,272 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,272 | INFO     | mean y: 2399988.1342756185
[2026-04-16 05:50:28] 2026-04-16 03:49:31,272 | INFO     | intersect: 2399988.1342756185
[2026-04-16 05:50:28] 2026-04-16 03:49:31,273 | INFO     | chi2: 0.22717710151679457
[2026-04-16 05:50:28] 2026-04-16 03:49:31,273 | INFO     | current chi2=0.22717710151679457 (change=82.195942682917 %)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,273 | INFO     | sum of square deviations: 6662039329.5
[2026-04-16 05:50:28] 2026-04-16 03:49:31,275 | INFO     | sum of deviations: -15392431309.500002
[2026-04-16 05:50:28] 2026-04-16 03:49:31,275 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,275 | INFO     | mean y: 2394679.3992805756
[2026-04-16 05:50:28] 2026-04-16 03:49:31,275 | INFO     | intersect: 2394679.3992805756
[2026-04-16 05:50:28] 2026-04-16 03:49:31,275 | INFO     | chi2: 0.16737587428964107
[2026-04-16 05:50:28] 2026-04-16 03:49:31,275 | INFO     | current chi2=0.16737587428964107 (change=26.32361572882052 %)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,276 | INFO     | sum of square deviations: 6309000152.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,277 | INFO     | sum of deviations: -2054932497.9999988
[2026-04-16 05:50:28] 2026-04-16 03:49:31,277 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,277 | INFO     | mean y: 2388915.9523809524
[2026-04-16 05:50:28] 2026-04-16 03:49:31,277 | INFO     | intersect: 2388915.9523809524
[2026-04-16 05:50:28] 2026-04-16 03:49:31,278 | INFO     | chi2: 0.08817469333674952
[2026-04-16 05:50:28] 2026-04-16 03:49:31,278 | INFO     | current chi2=0.08817469333674952 (change=47.31935309615487 %)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,278 | INFO     | sum of square deviations: 5968658887.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,279 | INFO     | sum of deviations: 8898689180.5
[2026-04-16 05:50:28] 2026-04-16 03:49:31,279 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,280 | INFO     | mean y: 2384028.324626866
[2026-04-16 05:50:28] 2026-04-16 03:49:31,280 | INFO     | intersect: 2384028.324626866
[2026-04-16 05:50:28] 2026-04-16 03:49:31,280 | INFO     | chi2: 0.004227576948339728
[2026-04-16 05:50:28] 2026-04-16 03:49:31,280 | INFO     | current chi2=0.004227576948339728 (change=95.20545318803195 %)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,280 | INFO     | sum of square deviations: 5640782972.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | sum of deviations: 7414413543.000001
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | mean y: 2384718.425855513
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | intersect: 2384718.425855513
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | chi2: 0.0036548746088326586
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | current chi2=0.0036548746088326586 (change=13.546822364332922 %)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,282 | INFO     | left removable region: 25
[2026-04-16 05:50:28] 2026-04-16 03:49:31,283 | INFO     | sum of square deviations: 5263458688.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,284 | INFO     | sum of deviations: 6332141783.000001
[2026-04-16 05:50:28] 2026-04-16 03:49:31,284 | INFO     | mean x (centered): 0.0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,284 | INFO     | mean y: 2384198.0311284047
[2026-04-16 05:50:28] 2026-04-16 03:49:31,284 | INFO     | intersect: 2384198.0311284047
[2026-04-16 05:50:28] 2026-04-16 03:49:31,284 | INFO     | chi2: 0.0030064248285264954
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | current memory leak: 1.20 B/s (using 257 data points, chi2=0.00)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | could have reported an average CPU frequency of 4000 MHz (13 samples)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | ..............................
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . Timing measurements:
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . get job = 0 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . initial setup = 3 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . payload setup = 4 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . stage-in = 0 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . payload execution = 17535 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,285 | INFO     | . stage-out = 0 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,286 | INFO     | . log creation = 0 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,286 | INFO     | ..............................
[2026-04-16 05:50:28] 2026-04-16 03:49:31,348 | INFO     | 
[2026-04-16 05:50:28] 2026-04-16 03:49:31,348 | INFO     | job summary report
[2026-04-16 05:50:28] 2026-04-16 03:49:31,348 | INFO     | --------------------------------------------------
[2026-04-16 05:50:28] 2026-04-16 03:49:31,348 | INFO     | PanDA job id: 7083273836
[2026-04-16 05:50:28] 2026-04-16 03:49:31,348 | INFO     | task id: 49179225
[2026-04-16 05:50:28] 2026-04-16 03:49:31,348 | INFO     | errors: (none)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | pilot state: finished 
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | transexitcode: 0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | exeerrorcode: 0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | exeerrordiag: 
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | exitcode: 0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | exitmsg: OK
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | cpuconsumptiontime: 67898 s
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | nevents: 400
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | neventsw: 0
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | pid: 1719544
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | pgrp: 1719544
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | corecount: 4
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | event service: False
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | sizes: {0: 2279667, 1: 2281496, 11: 2281496, 17544: 2313826, 17545: 2322826, 17548: 2323204}
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | --------------------------------------------------
[2026-04-16 05:50:28] 2026-04-16 03:49:31,349 | INFO     | 
[2026-04-16 05:50:28] 2026-04-16 03:49:31,350 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/1
[2026-04-16 05:50:28] 2026-04-16 03:49:31,361 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,361 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,361 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,362 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,363 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-16 05:50:28] 2026-04-16 03:49:31,363 | INFO     | job 7083273836 has completed (purged errors)
[2026-04-16 05:50:28] 2026-04-16 03:49:31,363 | INFO     | overall cleanup function is called
[2026-04-16 05:50:28] 2026-04-16 03:49:32,369 | INFO     | --- collectZombieJob: --- 10, [1719544]
[2026-04-16 05:50:28] 2026-04-16 03:49:32,369 | INFO     | zombie collector waiting for pid 1719544
[2026-04-16 05:50:28] 2026-04-16 03:49:32,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-16 05:50:28] 2026-04-16 03:49:32,369 | INFO     | collected zombie processes
[2026-04-16 05:50:28] 2026-04-16 03:49:32,369 | INFO     | will attempt to kill all subprocesses of pid=1719544
[2026-04-16 05:50:28] 2026-04-16 03:49:32,440 | INFO     | process IDs to be killed: [1719544] (in reverse order)
[2026-04-16 05:50:28] 2026-04-16 03:49:32,467 | WARNING  | found no corresponding commands to process id(s)
[2026-04-16 05:50:28] 2026-04-16 03:49:32,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-16 05:50:28] 2026-04-16 03:49:32,469 | INFO     | did not find any defunct processes belonging to 1719544
[2026-04-16 05:50:28] 2026-04-16 03:49:32,471 | INFO     | did not find any defunct processes belonging to 1719544
[2026-04-16 05:50:28] 2026-04-16 03:49:32,471 | INFO     | Ready for new job
[2026-04-16 05:50:28] 2026-04-16 03:49:32,472 | INFO     | **************************************
[2026-04-16 05:50:28] 2026-04-16 03:49:32,472 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-16 05:50:28] 2026-04-16 03:49:32,472 | INFO     | **************************************
[2026-04-16 05:50:28] 2026-04-16 03:49:32,473 | INFO     | 
[2026-04-16 05:50:28] 2026-04-16 03:49:32,473 | INFO     | architecture information:
[2026-04-16 05:50:28] 2026-04-16 03:49:32,473 | INFO     | executing command: cat /etc/os-release
[2026-04-16 05:50:28] 2026-04-16 03:49:32,481 | INFO     | cat /etc/os-release:
[2026-04-16 05:50:28] NAME="CentOS Linux"
[2026-04-16 05:50:28] VERSION="7 (Core)"
[2026-04-16 05:50:28] ID="centos"
[2026-04-16 05:50:28] ID_LIKE="rhel fedora"
[2026-04-16 05:50:28] VERSION_ID="7"
[2026-04-16 05:50:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-16 05:50:28] ANSI_COLOR="0;31"
[2026-04-16 05:50:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-16 05:50:28] HOME_URL="https://www.centos.org/"
[2026-04-16 05:50:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-16 05:50:28] 
[2026-04-16 05:50:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-16 05:50:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-16 05:50:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-16 05:50:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-16 05:50:28] 
[2026-04-16 05:50:28] 2026-04-16 03:49:32,481 | INFO     | **************************************
[2026-04-16 05:50:28] 2026-04-16 03:49:32,983 | INFO     | executing command: df -mP /var/lib/boinc2/slots/1
[2026-04-16 05:50:28] 2026-04-16 03:49:32,991 | INFO     | sufficient remaining disk space (126050369536 B)
[2026-04-16 05:50:28] 2026-04-16 03:49:32,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-16 05:50:28] 2026-04-16 03:49:32,991 | INFO     | current server update state: UPDATING_FINAL
[2026-04-16 05:50:28] 2026-04-16 03:49:32,992 | INFO     | update_server=False
[2026-04-16 05:50:28] 2026-04-16 03:49:32,992 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-16 05:50:28] 2026-04-16 03:49:32,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-16 05:50:28] 2026-04-16 03:49:32,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-16 05:50:28] 2026-04-16 03:49:33,216 | INFO     | all data control threads have been joined
[2026-04-16 05:50:28] 2026-04-16 03:49:33,285 | INFO     | all payload control threads have been joined
[2026-04-16 05:50:28] 2026-04-16 03:49:33,993 | INFO     | [job] queue monitor thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:33,996 | INFO     | [job] retrieve thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:34,113 | WARNING  | process 1719544 can no longer be monitored (due to stat problems) - aborting
[2026-04-16 05:50:28] 2026-04-16 03:49:34,171 | INFO     | using path: /var/lib/boinc2/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-16 05:50:28] 2026-04-16 03:49:34,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-16 05:50:28] 2026-04-16 03:49:34,222 | INFO     | [data] control thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:34,240 | INFO     | number of running child processes to parent process 1719544: 1
[2026-04-16 05:50:28] 2026-04-16 03:49:34,240 | INFO     | maximum number of monitored processes: 6
[2026-04-16 05:50:28] 2026-04-16 03:49:34,240 | INFO     | aborting job monitoring since job object (job id=7083273836) has expired
[2026-04-16 05:50:28] 2026-04-16 03:49:34,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-16 05:50:28] 2026-04-16 03:49:34,240 | INFO     | will abort loop
[2026-04-16 05:50:28] 2026-04-16 03:49:34,243 | INFO     | [payload] execute_payloads thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:34,290 | INFO     | [payload] control thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:34,520 | INFO     | [data] copytool_in thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:34,645 | INFO     | all job control threads have been joined
[2026-04-16 05:50:28] 2026-04-16 03:49:34,658 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:34,699 | INFO     | [payload] validate_post thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:35,161 | INFO     | [job] create_data_payload thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:35,163 | INFO     | [payload] validate_pre thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:35,245 | INFO     | [job] job monitor thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:35,363 | INFO     | [job] validate thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:35,470 | INFO     | [payload] failed_post thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:35,650 | INFO     | [job] control thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:36,219 | INFO     | [data] copytool_out thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:49:36,997 | INFO     | [data] queue_monitor thread has finished
[2026-04-16 05:50:28] 2026-04-16 03:50:03,960 | INFO     | PID=1715086 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-16 05:50:28] 2026-04-16 03:50:03,961 | INFO     | .. there are 2 such processes running
[2026-04-16 05:50:28] 2026-04-16 03:50:03,961 | INFO     | found 0 job(s) in 20 queues
[2026-04-16 05:50:28] 2026-04-16 03:50:03,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-16 05:50:28] 2026-04-16 03:50:03,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-16 05:50:28] 2026-04-16 03:50:21,333 | INFO     | [monitor] cgroup control has ended
[2026-04-16 05:50:28] 2026-04-16 03:50:23,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711421708096)>', '<ExcThread(monitor, started 139710789842688)>']
[2026-04-16 05:50:28] 2026-04-16 03:50:24,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-16 05:50:28] 2026-04-16 03:50:24,060 | INFO     | [monitor] control thread has ended
[2026-04-16 05:50:28] 2026-04-16 03:50:28,433 | INFO     | all workflow threads have been joined
[2026-04-16 05:50:28] 2026-04-16 03:50:28,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-16 05:50:28] 2026-04-16 03:50:28,433 | INFO     | traces error code: 0
[2026-04-16 05:50:28] 2026-04-16 03:50:28,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-16 05:50:28] 2026-04-16 03:50:28,501 [wrapper] ==== pilot stdout END ====
[2026-04-16 05:50:28] 2026-04-16 03:50:28,502 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-16 05:50:28] 2026-04-16 03:50:28,504 [wrapper] pilotpid: 1715086
[2026-04-16 05:50:28] 2026-04-16 03:50:28,505 [wrapper] Pilot exit status: 0
[2026-04-16 05:50:28] 2026-04-16 03:50:28,511 [wrapper] pandaids: 7083273836
[2026-04-16 05:50:28] 2026-04-16 03:50:28,528 [wrapper] cleanup supervisor_pilot 1884496 1715087
[2026-04-16 05:50:28] 2026-04-16 03:50:28,530 [wrapper] Test setup, not cleaning
[2026-04-16 05:50:28] 2026-04-16 03:50:28,532 [wrapper] apfmon messages muted
[2026-04-16 05:50:28] 2026-04-16 03:50:28,533 [wrapper] ==== wrapper stdout END ====
[2026-04-16 05:50:28] 2026-04-16 03:50:28,535 [wrapper] ==== wrapper stderr END ====
[2026-04-16 05:50:28]  *** Error codes and diagnostics ***
[2026-04-16 05:50:28]     "exeErrorCode": 0,
[2026-04-16 05:50:28]     "pilotErrorCode": 0,
[2026-04-16 05:50:28]  *** Listing of results directory ***
[2026-04-16 05:50:28] insgesamt 480888
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc      5094 13. Apr 15:10 queuedata.json
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc    644190 13. Apr 15:10 pilot3.tar.gz
[2026-04-16 05:50:28] -rwx------ 1 boinc boinc     36322 13. Apr 15:12 runpilot2-wrapper.sh
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc       100 16. Apr 00:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-16 05:50:28] -rwxr-xr-x 1 boinc boinc      7986 16. Apr 00:56 run_atlas
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc       105 16. Apr 00:56 job.xml
[2026-04-16 05:50:28] -rw-r--r-- 2 boinc boinc 245495454 16. Apr 00:56 EVNT.49130933._000008.pool.root.1
[2026-04-16 05:50:28] drwxrwx--x 2 boinc boinc      4096 16. Apr 00:56 shared
[2026-04-16 05:50:28] -rw-r--r-- 2 boinc boinc    656928 16. Apr 00:56 input.tar.gz
[2026-04-16 05:50:28] -rw-r--r-- 2 boinc boinc     15665 16. Apr 00:56 start_atlas.sh
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc         0 16. Apr 00:56 boinc_setup_complete
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc      9801 16. Apr 00:56 init_data.xml
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc         0 16. Apr 00:56 boinc_lockfile
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc      2598 16. Apr 00:56 pandaJob.out
[2026-04-16 05:50:28] -rw------- 1 boinc boinc        52 16. Apr 00:56 setup.sh.local
[2026-04-16 05:50:28] -rw------- 1 boinc boinc    996684 16. Apr 00:56 agis_schedconf.cvmfs.json
[2026-04-16 05:50:28] -rw------- 1 boinc boinc       423 16. Apr 00:56 workernode_map.json
[2026-04-16 05:50:28] drwx------ 5 boinc boinc      4096 16. Apr 00:56 pilot3
[2026-04-16 05:50:28] -rw------- 1 boinc boinc 238854584 16. Apr 05:48 HITS.49179225._000824.pool.root.1
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc       488 16. Apr 05:49 boinc_task_state.xml
[2026-04-16 05:50:28] -rw------- 1 boinc boinc      1018 16. Apr 05:49 memory_monitor_summary.json
[2026-04-16 05:50:28] -rw------- 1 boinc boinc   1511633 16. Apr 05:49 agis_ddmendpoints.agis.ALL.json
[2026-04-16 05:50:28] -rw------- 1 boinc boinc    348781 16. Apr 05:49 log.49179225._000824.job.log.tgz.1
[2026-04-16 05:50:28] -rw------- 1 boinc boinc      6314 16. Apr 05:49 heartbeat_new.json
[2026-04-16 05:50:28] -rw------- 1 boinc boinc      6205 16. Apr 05:49 heartbeat.json
[2026-04-16 05:50:28] -rw------- 1 boinc boinc        95 16. Apr 05:50 pilot_heartbeat.json
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc      8192 16. Apr 05:50 boinc_mmap_file
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc        28 16. Apr 05:50 wrapper_checkpoint.txt
[2026-04-16 05:50:28] -rw------- 1 boinc boinc      5342 16. Apr 05:50 pilotlog.txt
[2026-04-16 05:50:28] -rw------- 1 boinc boinc   1655097 16. Apr 05:50 log.49179225._000824.job.log.1
[2026-04-16 05:50:28] -rw------- 1 boinc boinc       357 16. Apr 05:50 output.list
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc       410 16. Apr 05:50 runtime_log
[2026-04-16 05:50:28] -rw------- 1 boinc boinc   2017280 16. Apr 05:50 result.tar.gz
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc      8920 16. Apr 05:50 runtime_log.err
[2026-04-16 05:50:28] -rw------- 1 boinc boinc       647 16. Apr 05:50 ebcaf99c6826.diag
[2026-04-16 05:50:28] -rw-r--r-- 1 boinc boinc     20645 16. Apr 05:50 stderr.txt
[2026-04-16 05:50:28] HITS file was successfully produced:
[2026-04-16 05:50:28] -rw------- 1 boinc boinc 238854584 16. Apr 05:48 shared/HITS.pool.root.1
[2026-04-16 05:50:28]  *** Contents of shared directory: ***
[2026-04-16 05:50:28] insgesamt 475644
[2026-04-16 05:50:28] -rw-r--r-- 2 boinc boinc 245495454 16. Apr 00:56 ATLAS.root_0
[2026-04-16 05:50:28] -rw-r--r-- 2 boinc boinc    656928 16. Apr 00:56 input.tar.gz
[2026-04-16 05:50:28] -rw-r--r-- 2 boinc boinc     15665 16. Apr 00:56 start_atlas.sh
[2026-04-16 05:50:28] -rw------- 1 boinc boinc 238854584 16. Apr 05:48 HITS.pool.root.1
[2026-04-16 05:50:28] -rw------- 1 boinc boinc   2017280 16. Apr 05:50 result.tar.gz
05:50:29 (1710708): run_atlas exited; CPU time 68083.114895
05:50:29 (1710708): called boinc_finish(0)

</stderr_txt>
]]>

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