Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:22:08 (17781): wrapper (7.7.26015): starting
08:22:08 (17781): wrapper: running run_atlas (--nthreads 8)
[2026-04-14 08:22:08] Arguments: --nthreads 8
[2026-04-14 08:22:08] Threads: 8
[2026-04-14 08:22:08] Checking for CVMFS
[2026-04-14 08:22:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 08:22:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 08:22:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 08:22:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 08:22:14] 2.11.2.0 31250 18283 102424 158443 2 53 18258661 25165825 96 130560 0 8173174 99.814 7648840 10942 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-14 08:22:14] CVMFS is ok
[2026-04-14 08:22:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 08:22:14] Checking for apptainer binary...
[2026-04-14 08:22:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 08:22:14] Running /usr/bin/apptainer --version
[2026-04-14 08:22:15] apptainer version 1.3.2-1.el7
[2026-04-14 08:22:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 08:22:28] cg-vwn368.simple-grid.lan
[2026-04-14 08:22:28] apptainer works
[2026-04-14 08:22:28] Set ATHENA_PROC_NUMBER=8
[2026-04-14 08:22:28] Set ATHENA_CORE_NUMBER=8
[2026-04-14 08:22:28] Starting ATLAS job with PandaID=7089661095
[2026-04-14 08:22:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 12:51:27]  *** The last 200 lines of the pilot log: ***
[2026-04-14 12:51:27] 2026-04-14 10:50:21,364 | INFO     | this job has now completed (state=finished)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,365 | INFO     | log transfer has been attempted: DONE
[2026-04-14 12:51:27] 2026-04-14 10:50:21,365 | INFO     | job 7089661095 has finished - writing final server update
[2026-04-14 12:51:27] 2026-04-14 10:50:21,365 | INFO     | total number of processed events: 400 (read)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,367 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7089661095/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,368 | INFO     | extracted standard info from prmon json
[2026-04-14 12:51:27] 2026-04-14 10:50:21,368 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 12:51:27] 2026-04-14 10:50:21,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 12:51:27] 2026-04-14 10:50:21,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 12:51:27] 2026-04-14 10:50:21,373 | INFO     | fitting pss+swap vs Time
[2026-04-14 12:51:27] 2026-04-14 10:50:21,374 | INFO     | sum of square deviations: 4962187923.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,376 | INFO     | sum of deviations: 111087526664.49997
[2026-04-14 12:51:27] 2026-04-14 10:50:21,376 | INFO     | mean x (centered): 0.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,376 | INFO     | mean y: 2430127.98015873
[2026-04-14 12:51:27] 2026-04-14 10:50:21,376 | INFO     | intersect: 2430127.98015873
[2026-04-14 12:51:27] 2026-04-14 10:50:21,377 | INFO     | chi2: 8.999731687871078
[2026-04-14 12:51:27] 2026-04-14 10:50:21,377 | INFO     | sum of square deviations: 4672638308.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,383 | INFO     | sum of deviations: 125491443092.00002
[2026-04-14 12:51:27] 2026-04-14 10:50:21,383 | INFO     | mean x (centered): 0.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,383 | INFO     | mean y: 2437573.149797571
[2026-04-14 12:51:27] 2026-04-14 10:50:21,383 | INFO     | intersect: 2437573.149797571
[2026-04-14 12:51:27] 2026-04-14 10:50:21,384 | INFO     | chi2: 8.31322033342424
[2026-04-14 12:51:27] 2026-04-14 10:50:21,384 | INFO     | current chi2=8.31322033342424 (change=7.628131351649602 %)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,384 | INFO     | right removable region: 246
[2026-04-14 12:51:27] 2026-04-14 10:50:21,384 | INFO     | sum of square deviations: 4672638308.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,386 | INFO     | sum of deviations: 22792366533.000008
[2026-04-14 12:51:27] 2026-04-14 10:50:21,386 | INFO     | mean x (centered): 0.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,387 | INFO     | mean y: 2476605.7449392714
[2026-04-14 12:51:27] 2026-04-14 10:50:21,387 | INFO     | intersect: 2476605.7449392714
[2026-04-14 12:51:27] 2026-04-14 10:50:21,387 | INFO     | chi2: 3.829774144212573
[2026-04-14 12:51:27] 2026-04-14 10:50:21,387 | INFO     | current chi2=3.829774144212573 (change=57.44568530444133 %)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,388 | INFO     | sum of square deviations: 4394577280.5
[2026-04-14 12:51:27] 2026-04-14 10:50:21,390 | INFO     | sum of deviations: -43562163569.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,390 | INFO     | mean x (centered): 0.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,390 | INFO     | mean y: 2512945.743801653
[2026-04-14 12:51:27] 2026-04-14 10:50:21,390 | INFO     | intersect: 2512945.743801653
[2026-04-14 12:51:27] 2026-04-14 10:50:21,391 | INFO     | chi2: 1.0896675892897683
[2026-04-14 12:51:27] 2026-04-14 10:50:21,391 | INFO     | current chi2=1.0896675892897683 (change=71.54747125397883 %)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,391 | INFO     | sum of square deviations: 4127772278.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,393 | INFO     | sum of deviations: -54093277257.00001
[2026-04-14 12:51:27] 2026-04-14 10:50:21,393 | INFO     | mean x (centered): 0.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,393 | INFO     | mean y: 2518924.130801688
[2026-04-14 12:51:27] 2026-04-14 10:50:21,394 | INFO     | intersect: 2518924.130801688
[2026-04-14 12:51:27] 2026-04-14 10:50:21,394 | INFO     | chi2: 0.9714400416337365
[2026-04-14 12:51:27] 2026-04-14 10:50:21,394 | INFO     | current chi2=0.9714400416337365 (change=10.849872825261414 %)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,394 | INFO     | left removable region: 15
[2026-04-14 12:51:27] 2026-04-14 10:50:21,395 | INFO     | sum of square deviations: 3822136780.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,396 | INFO     | sum of deviations: -37148067737.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,397 | INFO     | mean x (centered): 0.0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,397 | INFO     | mean y: 2528870.4025974027
[2026-04-14 12:51:27] 2026-04-14 10:50:21,397 | INFO     | intersect: 2528870.4025974027
[2026-04-14 12:51:27] 2026-04-14 10:50:21,397 | INFO     | chi2: 0.18438336516964057
[2026-04-14 12:51:27] 2026-04-14 10:50:21,397 | INFO     | current memory leak: -9.72 B/s (using 231 data points, chi2=0.18)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,398 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,398 | INFO     | ..............................
[2026-04-14 12:51:27] 2026-04-14 10:50:21,398 | INFO     | . Timing measurements:
[2026-04-14 12:51:27] 2026-04-14 10:50:21,398 | INFO     | . get job = 0 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | . initial setup = 113 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | . payload setup = 196 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | . stage-in = 0 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | . payload execution = 15470 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | . stage-out = 4 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | . log creation = 1 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,399 | INFO     | ..............................
[2026-04-14 12:51:27] 2026-04-14 10:50:21,592 | INFO     | 
[2026-04-14 12:51:27] 2026-04-14 10:50:21,592 | INFO     | job summary report
[2026-04-14 12:51:27] 2026-04-14 10:50:21,592 | INFO     | --------------------------------------------------
[2026-04-14 12:51:27] 2026-04-14 10:50:21,592 | INFO     | PanDA job id: 7089661095
[2026-04-14 12:51:27] 2026-04-14 10:50:21,592 | INFO     | task id: 49645815
[2026-04-14 12:51:27] 2026-04-14 10:50:21,592 | INFO     | errors: (none)
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | pilot state: finished 
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | transexitcode: 0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | exeerrorcode: 0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | exeerrordiag: 
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | exitcode: 0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | exitmsg: OK
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | cpuconsumptiontime: 64377 s
[2026-04-14 12:51:27] 2026-04-14 10:50:21,593 | INFO     | nevents: 400
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | neventsw: 0
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | pid: 26219
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | pgrp: 26219
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | corecount: 8
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | event service: False
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | sizes: {0: 2279110, 1: 2279795, 2: 2280196, 3: 2281652, 13: 2281652, 15671: 2312974, 15675: 2321972, 15678: 2322222}
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | --------------------------------------------------
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | 
[2026-04-14 12:51:27] 2026-04-14 10:50:21,594 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-14 12:51:27] 2026-04-14 10:50:22,095 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 12:51:27] 2026-04-14 10:50:22,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,098 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 12:51:27] 2026-04-14 10:50:22,098 | INFO     | job 7089661095 has completed (purged errors)
[2026-04-14 12:51:27] 2026-04-14 10:50:22,098 | INFO     | overall cleanup function is called
[2026-04-14 12:51:27] 2026-04-14 10:50:23,107 | INFO     | --- collectZombieJob: --- 10, [26219]
[2026-04-14 12:51:27] 2026-04-14 10:50:23,107 | INFO     | zombie collector waiting for pid 26219
[2026-04-14 12:51:27] 2026-04-14 10:50:23,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 12:51:27] 2026-04-14 10:50:23,107 | INFO     | collected zombie processes
[2026-04-14 12:51:27] 2026-04-14 10:50:23,107 | INFO     | will attempt to kill all subprocesses of pid=26219
[2026-04-14 12:51:27] 2026-04-14 10:50:23,189 | INFO     | process IDs to be killed: [26219] (in reverse order)
[2026-04-14 12:51:27] 2026-04-14 10:50:24,310 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 12:51:27] 2026-04-14 10:50:24,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 12:51:27] 2026-04-14 10:50:24,312 | INFO     | did not find any defunct processes belonging to 26219
[2026-04-14 12:51:27] 2026-04-14 10:50:24,314 | INFO     | did not find any defunct processes belonging to 26219
[2026-04-14 12:51:27] 2026-04-14 10:50:24,314 | INFO     | Ready for new job
[2026-04-14 12:51:27] 2026-04-14 10:50:24,315 | INFO     | **************************************
[2026-04-14 12:51:27] 2026-04-14 10:50:24,316 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 12:51:27] 2026-04-14 10:50:24,316 | INFO     | **************************************
[2026-04-14 12:51:27] 2026-04-14 10:50:24,316 | INFO     | 
[2026-04-14 12:51:27] 2026-04-14 10:50:24,316 | INFO     | pilot is running in a VM
[2026-04-14 12:51:27] 2026-04-14 10:50:24,316 | INFO     | architecture information:
[2026-04-14 12:51:27] 2026-04-14 10:50:24,323 | INFO     | executing command: cat /etc/os-release
[2026-04-14 12:51:27] 2026-04-14 10:50:24,590 | INFO     | cat /etc/os-release:
[2026-04-14 12:51:27] NAME="CentOS Linux"
[2026-04-14 12:51:27] VERSION="7 (Core)"
[2026-04-14 12:51:27] ID="centos"
[2026-04-14 12:51:27] ID_LIKE="rhel fedora"
[2026-04-14 12:51:27] VERSION_ID="7"
[2026-04-14 12:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 12:51:27] ANSI_COLOR="0;31"
[2026-04-14 12:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 12:51:27] HOME_URL="https://www.centos.org/"
[2026-04-14 12:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 12:51:27] 
[2026-04-14 12:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 12:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 12:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 12:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 12:51:27] 
[2026-04-14 12:51:27] 2026-04-14 10:50:24,590 | INFO     | **************************************
[2026-04-14 12:51:27] 2026-04-14 10:50:25,094 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-14 12:51:27] 2026-04-14 10:50:25,357 | INFO     | sufficient remaining disk space (497848156160 B)
[2026-04-14 12:51:27] 2026-04-14 10:50:25,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 12:51:27] 2026-04-14 10:50:25,358 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 12:51:27] 2026-04-14 10:50:25,358 | INFO     | update_server=False
[2026-04-14 12:51:27] 2026-04-14 10:50:25,358 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 12:51:27] 2026-04-14 10:50:25,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 12:51:27] 2026-04-14 10:50:25,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 12:51:27] 2026-04-14 10:50:25,365 | INFO     | aborting loop
[2026-04-14 12:51:27] 2026-04-14 10:50:26,209 | INFO     | all data control threads have been joined
[2026-04-14 12:51:27] 2026-04-14 10:50:26,216 | INFO     | all payload control threads have been joined
[2026-04-14 12:51:27] 2026-04-14 10:50:26,364 | INFO     | [data] copytool_in thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,364 | INFO     | [job] retrieve thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,371 | INFO     | [job] job monitor thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,427 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,504 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 12:51:27] 2026-04-14 10:50:26,660 | INFO     | [payload] validate_post thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:26,909 | INFO     | all job control threads have been joined
[2026-04-14 12:51:27] 2026-04-14 10:50:27,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 12:51:27] 2026-04-14 10:50:27,215 | INFO     | [data] control thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,222 | INFO     | [payload] control thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,301 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,366 | INFO     | [data] copytool_out thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,569 | INFO     | [job] queue monitor thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,727 | INFO     | [job] validate thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,743 | INFO     | [payload] failed_post thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:27,915 | INFO     | [job] control thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:31,018 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 12:51:27] 2026-04-14 10:50:53,275 | INFO     | PID=21781 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-14 12:51:27] 2026-04-14 10:50:53,275 | INFO     | .. there are 2 such processes running
[2026-04-14 12:51:27] 2026-04-14 10:50:53,276 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 12:51:27] 2026-04-14 10:50:53,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 12:51:27] 2026-04-14 10:50:53,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 12:51:27] 2026-04-14 10:51:16,763 | INFO     | [monitor] cgroup control has ended
[2026-04-14 12:51:27] 2026-04-14 10:51:18,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751839266624)>', '<ExcThread(monitor, started 139751189378816)>']
[2026-04-14 12:51:27] 2026-04-14 10:51:19,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 12:51:27] 2026-04-14 10:51:19,431 | INFO     | [monitor] control thread has ended
[2026-04-14 12:51:27] 2026-04-14 10:51:23,656 | INFO     | all workflow threads have been joined
[2026-04-14 12:51:27] 2026-04-14 10:51:23,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 12:51:27] 2026-04-14 10:51:23,656 | INFO     | traces error code: 0
[2026-04-14 12:51:27] 2026-04-14 10:51:23,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 12:51:27] 2026-04-14 10:51:23,949 [wrapper] ==== pilot stdout END ====
[2026-04-14 12:51:27] 2026-04-14 10:51:24,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 12:51:27] 2026-04-14 10:51:24,161 [wrapper] pilotpid: 21781
[2026-04-14 12:51:27] 2026-04-14 10:51:24,266 [wrapper] Pilot exit status: 0
[2026-04-14 12:51:27] 2026-04-14 10:51:24,808 [wrapper] pandaids: 7089661095
[2026-04-14 12:51:27] 2026-04-14 10:51:25,864 [wrapper] cleanup supervisor_pilot 15044 21782
[2026-04-14 12:51:27] 2026-04-14 10:51:25,998 [wrapper] Test setup, not cleaning
[2026-04-14 12:51:27] 2026-04-14 10:51:26,119 [wrapper] apfmon messages muted
[2026-04-14 12:51:27] 2026-04-14 10:51:26,181 [wrapper] ==== wrapper stdout END ====
[2026-04-14 12:51:27] 2026-04-14 10:51:26,263 [wrapper] ==== wrapper stderr END ====
[2026-04-14 12:51:27]  *** Error codes and diagnostics ***
[2026-04-14 12:51:27]     "exeErrorCode": 0,
[2026-04-14 12:51:27]     "pilotErrorCode": 0,
[2026-04-14 12:51:27]  *** Listing of results directory ***
[2026-04-14 12:51:27] total 410624
[2026-04-14 12:51:27] -rwx------. 1 boinc boinc     36322 Apr 13 18:31 runpilot2-wrapper.sh
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc    644190 Apr 13 18:37 pilot3.tar.gz
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc      5094 Apr 13 18:37 queuedata.json
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc       100 Apr 14 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 12:51:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 08:22 run_atlas
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc       105 Apr 14 08:22 job.xml
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc      6306 Apr 14 08:22 init_data.xml
[2026-04-14 12:51:27] -rw-r--r--. 2 boinc boinc 224658475 Apr 14 08:22 EVNT.48629115._000677.pool.root.1
[2026-04-14 12:51:27] -rw-r--r--. 2 boinc boinc     15665 Apr 14 08:22 start_atlas.sh
[2026-04-14 12:51:27] drwxrwx--x. 2 boinc boinc        68 Apr 14 08:22 shared
[2026-04-14 12:51:27] -rw-r--r--. 2 boinc boinc    656949 Apr 14 08:22 input.tar.gz
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc         0 Apr 14 08:22 boinc_lockfile
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc      2629 Apr 14 08:22 pandaJob.out
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc       415 Apr 14 08:28 workernode_map.json
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc    997512 Apr 14 08:28 agis_schedconf.cvmfs.json
[2026-04-14 12:51:27] drwx------. 5 boinc boinc      4096 Apr 14 08:28 pilot3
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc 188045459 Apr 14 12:48 HITS.49645815._016962.pool.root.1
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc       489 Apr 14 12:49 boinc_task_state.xml
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc      1034 Apr 14 12:50 memory_monitor_summary.json
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc   1511579 Apr 14 12:50 agis_ddmendpoints.agis.ALL.json
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc    415576 Apr 14 12:50 log.49645815._016962.job.log.tgz.1
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc      6343 Apr 14 12:50 heartbeat_new.json
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc      6234 Apr 14 12:50 heartbeat.json
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc        95 Apr 14 12:50 pilot_heartbeat.json
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc      4879 Apr 14 12:51 pilotlog.txt
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc   1449920 Apr 14 12:51 log.49645815._016962.job.log.1
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc      8192 Apr 14 12:51 boinc_mmap_file
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc        28 Apr 14 12:51 wrapper_checkpoint.txt
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc       357 Apr 14 12:51 output.list
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc       410 Apr 14 12:51 runtime_log
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc   1884160 Apr 14 12:51 result.tar.gz
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc      8438 Apr 14 12:51 runtime_log.err
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc       656 Apr 14 12:51 1a7cf61d7721.diag
[2026-04-14 12:51:27] -rw-r--r--. 1 boinc boinc     20627 Apr 14 12:51 stderr.txt
[2026-04-14 12:51:27] HITS file was successfully produced:
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc 188045459 Apr 14 12:48 shared/HITS.pool.root.1
[2026-04-14 12:51:27]  *** Contents of shared directory: ***
[2026-04-14 12:51:27] total 405536
[2026-04-14 12:51:27] -rw-r--r--. 2 boinc boinc 224658475 Apr 14 08:22 ATLAS.root_0
[2026-04-14 12:51:27] -rw-r--r--. 2 boinc boinc     15665 Apr 14 08:22 start_atlas.sh
[2026-04-14 12:51:27] -rw-r--r--. 2 boinc boinc    656949 Apr 14 08:22 input.tar.gz
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc 188045459 Apr 14 12:48 HITS.pool.root.1
[2026-04-14 12:51:27] -rw-------. 1 boinc boinc   1884160 Apr 14 12:51 result.tar.gz
12:51:29 (17781): run_atlas exited; CPU time 64521.132526
12:51:29 (17781): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN