Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:02 (3333388): wrapper (7.7.26015): starting
21:58:02 (3333388): wrapper: running run_atlas (--nthreads 3)
[2026-04-13 21:58:02] Arguments: --nthreads 3
[2026-04-13 21:58:02] Threads: 3
[2026-04-13 21:58:02] Checking for CVMFS
[2026-04-13 21:58:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 21:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 21:58:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 21:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 21:58:03] 2.9.2.0 2338549 5787 83900 158427 2 50 11134582 36864001 0 130560 0 3352489 99.987 220430 13938 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-13 21:58:03] CVMFS is ok
[2026-04-13 21:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 21:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 21:58:03] Further information can be found at the LHC@home message board.
[2026-04-13 21:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 21:58:03] Checking for apptainer binary...
[2026-04-13 21:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 21:58:03] Running /usr/bin/apptainer --version
[2026-04-13 21:58:03] apptainer version 1.4.1-1.1
[2026-04-13 21:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 21:58:03] belleA259
[2026-04-13 21:58:03] apptainer works
[2026-04-13 21:58:03] Set ATHENA_PROC_NUMBER=3
[2026-04-13 21:58:03] Set ATHENA_CORE_NUMBER=3
[2026-04-13 21:58:03] Starting ATLAS job with PandaID=7089659304
[2026-04-13 21:58:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 23:48:52]  *** The last 200 lines of the pilot log: ***
[2026-04-13 23:48:52] 2026-04-13 21:48:20,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 23:48:52] 2026-04-13 21:48:20,967 | INFO     | did not find any defunct processes belonging to 3341870
[2026-04-13 23:48:52] 2026-04-13 21:48:20,968 | INFO     | did not find any defunct processes belonging to 3341870
[2026-04-13 23:48:52] 2026-04-13 21:48:20,968 | INFO     | Ready for new job
[2026-04-13 23:48:52] 2026-04-13 21:48:20,969 | INFO     | **************************************
[2026-04-13 23:48:52] 2026-04-13 21:48:20,969 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 23:48:52] 2026-04-13 21:48:20,969 | INFO     | **************************************
[2026-04-13 23:48:52] 2026-04-13 21:48:20,969 | INFO     | 
[2026-04-13 23:48:52] 2026-04-13 21:48:20,969 | INFO     | architecture information:
[2026-04-13 23:48:52] 2026-04-13 21:48:20,969 | INFO     | executing command: cat /etc/os-release
[2026-04-13 23:48:52] 2026-04-13 21:48:20,978 | INFO     | cat /etc/os-release:
[2026-04-13 23:48:52] NAME="CentOS Linux"
[2026-04-13 23:48:52] VERSION="7 (Core)"
[2026-04-13 23:48:52] ID="centos"
[2026-04-13 23:48:52] ID_LIKE="rhel fedora"
[2026-04-13 23:48:52] VERSION_ID="7"
[2026-04-13 23:48:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 23:48:52] ANSI_COLOR="0;31"
[2026-04-13 23:48:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 23:48:52] HOME_URL="https://www.centos.org/"
[2026-04-13 23:48:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 23:48:52] 
[2026-04-13 23:48:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 23:48:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 23:48:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 23:48:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 23:48:52] 
[2026-04-13 23:48:52] 2026-04-13 21:48:20,978 | INFO     | **************************************
[2026-04-13 23:48:52] 2026-04-13 21:48:21,481 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-13 23:48:52] 2026-04-13 21:48:21,491 | INFO     | sufficient remaining disk space (350663737344 B)
[2026-04-13 23:48:52] 2026-04-13 21:48:21,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 23:48:52] 2026-04-13 21:48:21,491 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 23:48:52] 2026-04-13 21:48:21,491 | INFO     | update_server=False
[2026-04-13 23:48:52] 2026-04-13 21:48:21,491 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 23:48:52] 2026-04-13 21:48:21,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 23:48:52] 2026-04-13 21:48:21,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 23:48:52] 2026-04-13 21:48:21,810 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 23:48:52] 2026-04-13 21:48:21,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 23:48:52] 2026-04-13 21:48:21,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 23:48:52] 2026-04-13 21:48:21,810 | INFO     | will abort loop
[2026-04-13 23:48:52] 2026-04-13 21:48:21,877 | INFO     | all job control threads have been joined
[2026-04-13 23:48:52] 2026-04-13 21:48:21,882 | INFO     | all payload control threads have been joined
[2026-04-13 23:48:52] 2026-04-13 21:48:22,228 | INFO     | [monitor] cgroup control has ended
[2026-04-13 23:48:52] 2026-04-13 21:48:22,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 23:48:52] 2026-04-13 21:48:22,496 | INFO     | [job] retrieve thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,497 | INFO     | [job] queue monitor thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,513 | INFO     | [data] copytool_in thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,560 | INFO     | all data control threads have been joined
[2026-04-13 23:48:52] 2026-04-13 21:48:22,624 | INFO     | [payload] failed_post thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,741 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,815 | INFO     | [job] job monitor thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,882 | INFO     | [job] control thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:22,886 | INFO     | [payload] control thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:23,146 | INFO     | [payload] validate_post thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:23,565 | INFO     | [data] control thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:23,720 | INFO     | [job] validate thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:23,802 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:23,866 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:24,237 | INFO     | [data] copytool_out thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:25,497 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:31,578 | INFO     | job.realtimelogging is not enabled
[2026-04-13 23:48:52] 2026-04-13 21:48:32,583 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 23:48:52] 2026-04-13 21:48:34,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296763053888)>', '<ExcThread(monitor, started 140295886849792)>']
[2026-04-13 23:48:52] 2026-04-13 21:48:39,265 | INFO     | all workflow threads have been joined
[2026-04-13 23:48:52] 2026-04-13 21:48:39,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 23:48:52] 2026-04-13 21:48:39,265 | INFO     | traces error code: 0
[2026-04-13 23:48:52] 2026-04-13 21:48:39,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 23:48:52] 2026-04-13 21:48:52,093 | INFO     | PID=3337434 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 23:48:52] 2026-04-13 21:48:52,094 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 23:48:52] 2026-04-13 21:48:52,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 23:48:52] 2026-04-13 21:48:52,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 23:48:52] 2026-04-13 21:48:52,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 23:48:52] 2026-04-13 21:48:52,094 | INFO     | [monitor] control thread has ended
[2026-04-13 23:48:52] 2026-04-13 21:48:52,141 [wrapper] ==== pilot stdout END ====
[2026-04-13 23:48:52] 2026-04-13 21:48:52,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 23:48:52] 2026-04-13 21:48:52,145 [wrapper] pilotpid: 3337434
[2026-04-13 23:48:52] 2026-04-13 21:48:52,147 [wrapper] Pilot exit status: 0
[2026-04-13 23:48:52] 2026-04-13 21:48:52,155 [wrapper] pandaids: 7089659304
[2026-04-13 23:48:52] 2026-04-13 21:48:52,173 [wrapper] cleanup supervisor_pilot 3349053 3337435
[2026-04-13 23:48:52] 2026-04-13 21:48:52,176 [wrapper] Test setup, not cleaning
[2026-04-13 23:48:52] 2026-04-13 21:48:52,178 [wrapper] apfmon messages muted
[2026-04-13 23:48:52] 2026-04-13 21:48:52,180 [wrapper] ==== wrapper stdout END ====
[2026-04-13 23:48:52] 2026-04-13 21:48:52,183 [wrapper] ==== wrapper stderr END ====
[2026-04-13 23:48:52]  *** Error codes and diagnostics ***
[2026-04-13 23:48:52]     "exeErrorCode": 0,
[2026-04-13 23:48:52]     "pilotErrorCode": 0,
[2026-04-13 23:48:52]  *** Listing of results directory ***
[2026-04-13 23:48:52] total 419356
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc    644190 Apr 13 18:26 pilot3.tar.gz
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc      5094 Apr 13 18:26 queuedata.json
[2026-04-13 23:48:52] -rwx------ 1 boinc boinc     36322 Apr 13 18:27 runpilot2-wrapper.sh
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc       100 Apr 13 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 23:48:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 21:58 run_atlas
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc       105 Apr 13 21:58 job.xml
[2026-04-13 23:48:52] -rw-r--r-- 2 boinc boinc 223070916 Apr 13 21:58 EVNT.48629115._000669.pool.root.1
[2026-04-13 23:48:52] drwxrwx--x 2 boinc boinc      4096 Apr 13 21:58 shared
[2026-04-13 23:48:52] -rw-r--r-- 2 boinc boinc    656947 Apr 13 21:58 input.tar.gz
[2026-04-13 23:48:52] -rw-r--r-- 2 boinc boinc     15665 Apr 13 21:58 start_atlas.sh
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc         0 Apr 13 21:58 boinc_setup_complete
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc      6362 Apr 13 21:58 init_data.xml
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc         0 Apr 13 21:58 boinc_lockfile
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc      2626 Apr 13 21:58 pandaJob.out
[2026-04-13 23:48:52] -rw------- 1 boinc boinc    997504 Apr 13 21:58 agis_schedconf.cvmfs.json
[2026-04-13 23:48:52] -rw------- 1 boinc boinc   1511579 Apr 13 21:58 agis_ddmendpoints.agis.ALL.json
[2026-04-13 23:48:52] -rw------- 1 boinc boinc       426 Apr 13 21:58 workernode_map.json
[2026-04-13 23:48:52] drwx------ 5 boinc boinc      4096 Apr 13 21:58 pilot3
[2026-04-13 23:48:52] -rw------- 1 boinc boinc 200581716 Apr 13 23:48 HITS.49645815._016743.pool.root.1
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc       487 Apr 13 23:48 boinc_task_state.xml
[2026-04-13 23:48:52] -rw------- 1 boinc boinc      1011 Apr 13 23:48 memory_monitor_summary.json
[2026-04-13 23:48:52] -rw------- 1 boinc boinc    229071 Apr 13 23:48 log.49645815._016743.job.log.tgz.1
[2026-04-13 23:48:52] -rw------- 1 boinc boinc      6314 Apr 13 23:48 heartbeat_new.json
[2026-04-13 23:48:52] -rw------- 1 boinc boinc      6205 Apr 13 23:48 heartbeat.json
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc        27 Apr 13 23:48 wrapper_checkpoint.txt
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc      8192 Apr 13 23:48 boinc_mmap_file
[2026-04-13 23:48:52] -rw------- 1 boinc boinc        95 Apr 13 23:48 pilot_heartbeat.json
[2026-04-13 23:48:52] -rw------- 1 boinc boinc       747 Apr 13 23:48 pilotlog.txt
[2026-04-13 23:48:52] -rw------- 1 boinc boinc    631149 Apr 13 23:48 log.49645815._016743.job.log.1
[2026-04-13 23:48:52] -rw------- 1 boinc boinc       357 Apr 13 23:48 output.list
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc       410 Apr 13 23:48 runtime_log
[2026-04-13 23:48:52] -rw------- 1 boinc boinc    880640 Apr 13 23:48 result.tar.gz
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc      8533 Apr 13 23:48 runtime_log.err
[2026-04-13 23:48:52] -rw------- 1 boinc boinc       661 Apr 13 23:48 1975ff4c6470.diag
[2026-04-13 23:48:52] -rw-r--r-- 1 boinc boinc      9969 Apr 13 23:48 stderr.txt
[2026-04-13 23:48:52] HITS file was successfully produced:
[2026-04-13 23:48:52] -rw------- 1 boinc boinc 200581716 Apr 13 23:48 shared/HITS.pool.root.1
[2026-04-13 23:48:52]  *** Contents of shared directory: ***
[2026-04-13 23:48:52] total 415256
[2026-04-13 23:48:52] -rw-r--r-- 2 boinc boinc 223070916 Apr 13 21:58 ATLAS.root_0
[2026-04-13 23:48:52] -rw-r--r-- 2 boinc boinc    656947 Apr 13 21:58 input.tar.gz
[2026-04-13 23:48:52] -rw-r--r-- 2 boinc boinc     15665 Apr 13 21:58 start_atlas.sh
[2026-04-13 23:48:52] -rw------- 1 boinc boinc 200581716 Apr 13 23:48 HITS.pool.root.1
[2026-04-13 23:48:52] -rw------- 1 boinc boinc    880640 Apr 13 23:48 result.tar.gz
23:48:54 (3333388): run_atlas exited; CPU time 18770.959228
23:48:54 (3333388): called boinc_finish(0)

</stderr_txt>
]]>

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