Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-14 03:00:31 (5680): vboxwrapper version 26210
2026-04-14 03:00:31 (5680): BOINC client version: 8.2.8
2026-04-14 03:00:32 (5680): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-04-14 03:00:32 (5680): Successfully copied 'init_data.xml' to the shared directory.
2026-04-14 03:00:32 (5680): Create VM. (boinc_d575f5191e9c9beb, slot#4)
2026-04-14 03:00:33 (5680): Setting Memory Size for VM. (4000MB)
2026-04-14 03:00:33 (5680): Setting CPU Count for VM. (4)
2026-04-14 03:00:33 (5680): Setting Chipset Options for VM.
2026-04-14 03:00:34 (5680): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-14 03:00:34 (5680): Setting Boot Options for VM.
2026-04-14 03:00:34 (5680): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-14 03:00:35 (5680): Enabling VM Network Access.
2026-04-14 03:00:35 (5680): Disabling USB Support for VM.
2026-04-14 03:00:35 (5680): Disabling COM Port Support for VM.
2026-04-14 03:00:35 (5680): Disabling LPT Port Support for VM.
2026-04-14 03:00:36 (5680): Disabling Audio Support for VM.
2026-04-14 03:00:36 (5680): Disabling Clipboard Support for VM.
2026-04-14 03:00:36 (5680): Disabling Drag and Drop Support for VM.
2026-04-14 03:00:36 (5680): Adding storage controller(s) to VM.
2026-04-14 03:00:37 (5680): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-14 03:00:37 (5680): Adding VirtualBox Guest Additions to VM.
2026-04-14 03:00:37 (5680): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-14 03:00:38 (5680): forwarding host port 63714 to guest port 80
2026-04-14 03:00:38 (5680): Enabling remote desktop for VM.
2026-04-14 03:00:38 (5680): Enabling shared directory for VM.
2026-04-14 03:00:39 (5680): Starting VM using VBoxManage interface. (boinc_d575f5191e9c9beb, slot#4)
2026-04-14 03:00:46 (5680): Successfully started VM. (PID = '12128')
2026-04-14 03:00:46 (5680): Reporting VM Process ID to BOINC.
2026-04-14 03:00:46 (5680): Guest Log: BIOS: VirtualBox 7.2.2
2026-04-14 03:00:46 (5680): Guest Log: CPUID EDX: 0x178bfbff
2026-04-14 03:00:46 (5680): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-14 03:00:46 (5680): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-14 03:00:46 (5680): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-14 03:00:46 (5680): Detected: Web Application Enabled (http://localhost:63714)
2026-04-14 03:00:46 (5680): Detected: Remote Desktop Enabled (localhost:63715)
2026-04-14 03:00:46 (5680): Preference change detected
2026-04-14 03:00:46 (5680): Setting CPU throttle for VM. (100%)
2026-04-14 03:00:46 (5680): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-14 03:00:48 (5680): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-14 03:00:48 (5680): Guest Log: BIOS: Booting from Hard Disk...
2026-04-14 03:00:51 (5680): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-14 03:00:51 (5680): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-14 03:00:51 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-14 03:00:56 (5680): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-14 03:00:56 (5680): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-14 03:01:03 (5680): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000176 main     Log opened 2026-04-14T03:01:01.577790000Z
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000306 main     OS Product: Linux
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000354 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000402 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000502 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000503 main     Process ID: 1319
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.000504 main     Package type: LINUX_64BITS_GENERIC
2026-04-14 03:01:03 (5680): Guest Log: 00:00:00.001546 main     5.2.32 r132073 started. Verbose level = 0
2026-04-14 03:01:03 (5680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-14 03:01:03 (5680): Guest Log: [INFO] Mounting shared directory
2026-04-14 03:01:03 (5680): Guest Log: [INFO] Checking for init_data.xml
2026-04-14 03:01:07 (5680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-14 03:01:07 (5680): Guest Log: [INFO] Detected branch: prod
2026-04-14 03:01:07 (5680): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-14 03:01:07 (5680): Guest Log: Copying input files
2026-04-14 03:01:08 (5680): Guest Log: Copied input files into RunAtlas.
2026-04-14 03:01:08 (5680): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-14 03:01:08 (5680): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-14 03:01:08 (5680): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-14 03:01:08 (5680): Guest Log: Further information can be found at the LHC@home message board.
2026-04-14 03:01:13 (5680): Guest Log: 00:00:10.015407 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 322 101 000ns (GuestNow=1 776 128 472 259 434 000 ns GuestLast=1 776 135 661 581 535 000 ns fSetTimeLastLoop=true )
2026-04-14 03:01:18 (5680): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-14 03:01:18 (5680): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-14 03:01:18 (5680): Guest Log: 2.6.3.0 1625 0 32036 158434 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-14 03:01:18 (5680): Guest Log: copied the webapp to /var/www
2026-04-14 03:01:18 (5680): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-14 03:01:19 (5680): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-14 03:01:19 (5680): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-14 03:01:19 (5680): Guest Log:  *** Starting ATLAS job. (PandaID=7089481101 taskID=49645815) ***
2026-04-14 04:40:49 (5680): Status Report: Elapsed Time: '6000.000000'
2026-04-14 04:40:49 (5680): Status Report: CPU Time: '21177.796875'
2026-04-14 06:20:52 (5680): Status Report: Elapsed Time: '12000.000000'
2026-04-14 06:20:52 (5680): Status Report: CPU Time: '45037.593750'
2026-04-14 08:00:55 (5680): Status Report: Elapsed Time: '18000.000000'
2026-04-14 08:00:55 (5680): Status Report: CPU Time: '68905.453125'
2026-04-14 08:40:47 (5680): Guest Log:  *** Job finished ***
2026-04-14 08:40:47 (5680): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:11,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:11,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:29,520 | INFO     | [monitor] cgroup control has ended
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:31,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168288913216)>', '<ExcThread(monitor, started 140167700526848)>']
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:32,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:32,214 | INFO     | [monitor] control thread has ended
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,480 | INFO     | all workflow threads have been joined
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,481 | INFO     | end of generic workflow (traces error code: 0)
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,481 | INFO     | traces error code: 0
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,643 [wrapper] ==== pilot stdout END ====
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,648 [wrapper] ==== wrapper stdout RESUME ====
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,653 [wrapper] pilotpid: 5979
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,658 [wrapper] Pilot exit status: 0
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,714 [wrapper] pandaids: 7089481101
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,749 [wrapper] cleanup supervisor_pilot 29531 5980
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,762 [wrapper] Test setup, not cleaning
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,767 [wrapper] apfmon messages muted
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,772 [wrapper] ==== wrapper stdout END ====
2026-04-14 08:40:47 (5680): Guest Log: 2026-04-14 06:40:36,778 [wrapper] ==== wrapper stderr END ====
2026-04-14 08:40:47 (5680): Guest Log:  *** Error codes and diagnostics ***
2026-04-14 08:40:47 (5680): Guest Log:     "exeErrorCode": 0,
2026-04-14 08:40:47 (5680): Guest Log:     "pilotErrorCode": 0,
2026-04-14 08:40:47 (5680): Guest Log:  *** Listing of results directory ***
2026-04-14 08:40:47 (5680): Guest Log: total 198072
2026-04-14 08:40:47 (5680): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 13 12:43 pilot3.tar.gz
2026-04-14 08:40:47 (5680): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 13 12:46 runpilot2-wrapper.sh
2026-04-14 08:40:47 (5680): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 13 12:51 queuedata.json
2026-04-14 08:40:47 (5680): Guest Log: -rwxr-xr-x. 1 atlas atlas     10289 Apr 14 01:01 init_data.xml
2026-04-14 08:40:47 (5680): Guest Log: -rwxr-xr-x. 1 atlas atlas    656944 Apr 14 01:01 input.tar.gz
2026-04-14 08:40:47 (5680): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 14 01:01 start_atlas.sh
2026-04-14 08:40:47 (5680): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 14 01:01 EVNT.48629115._000598.pool.root.1 -> /data/./ATLAS.root_0
2026-04-14 08:40:47 (5680): Guest Log: -rw-r--r--. 1 atlas atlas      2628 Apr 14 01:01 pandaJob.out
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas    997512 Apr 14 01:01 agis_schedconf.cvmfs.json
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas       422 Apr 14 01:02 workernode_map.json
2026-04-14 08:40:47 (5680): Guest Log: drwx------. 5 atlas atlas      4096 Apr 14 01:02 pilot3
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas 194419621 Apr 14 06:39 HITS.49645815._014962.pool.root.1
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas        95 Apr 14 06:39 pilot_heartbeat.json
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 14 06:39 memory_monitor_summary.json
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 14 06:39 agis_ddmendpoints.agis.ALL.json
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas    373242 Apr 14 06:39 log.49645815._014962.job.log.tgz.1
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas      6380 Apr 14 06:39 heartbeat_new.json
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas      6271 Apr 14 06:39 heartbeat.json
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas      4800 Apr 14 06:40 pilotlog.txt
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas   1834393 Apr 14 06:40 log.49645815._014962.job.log.1
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 06:40 output.list
2026-04-14 08:40:47 (5680): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 14 06:40 runtime_log
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas   2222080 Apr 14 06:40 result.tar.gz
2026-04-14 08:40:47 (5680): Guest Log: -rw-r--r--. 1 atlas atlas      8347 Apr 14 06:40 runtime_log.err
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas       649 Apr 14 06:40 e59961f857b1.diag
2026-04-14 08:40:47 (5680): Guest Log: Looking for outputfile HITS.49645815._014962.pool.root.1
2026-04-14 08:40:47 (5680): Guest Log: HITS file was successfully produced
2026-04-14 08:40:47 (5680): Guest Log: -rw-------. 1 atlas atlas 194419621 Apr 14 06:39 /home/atlas/RunAtlas/HITS.49645815._014962.pool.root.1
2026-04-14 08:40:48 (5680): Guest Log: Successfully finished the ATLAS job!
2026-04-14 08:40:48 (5680): Guest Log: Copying the results back to the shared directory!
2026-04-14 08:40:48 (5680): Guest Log:  *** Contents of shared directory: ***
2026-04-14 08:40:48 (5680): Guest Log: total 409696
2026-04-14 08:40:48 (5680): Guest Log: -rwxrwxrwx. 1 root root 222194016 Apr 14 01:00 ATLAS.root_0
2026-04-14 08:40:48 (5680): Guest Log: -rwxrwxrwx. 1 root root 194419621 Apr 14  2026 HITS.pool.root.1
2026-04-14 08:40:48 (5680): Guest Log: -rwxrwxrwx. 1 root root     10289 Apr 14 01:00 init_data.xml
2026-04-14 08:40:48 (5680): Guest Log: -rwxrwxrwx. 1 root root    656944 Apr 13 16:21 input.tar.gz
2026-04-14 08:40:48 (5680): Guest Log: -rwxrwxrwx. 1 root root   2222080 Apr 14  2026 result.tar.gz
2026-04-14 08:40:48 (5680): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 13 16:21 start_atlas.sh
2026-04-14 08:40:48 (5680): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-14 08:40:48 (5680): VM Completion File Detected.
2026-04-14 08:40:48 (5680): Powering off VM.
2026-04-14 08:40:49 (5680): Successfully stopped VM.
2026-04-14 08:40:49 (5680): Deregistering VM. (boinc_d575f5191e9c9beb, slot#4)
2026-04-14 08:40:49 (5680): Removing network bandwidth throttle group from VM.
2026-04-14 08:40:49 (5680): Removing VM from VirtualBox.
2026-04-14 08:40:55 (5680): called boinc_finish(0)

</stderr_txt>
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