Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:06:26 (12645): wrapper (7.7.26015): starting
05:06:26 (12645): wrapper: running run_atlas (--nthreads 8)
[2026-04-14 05:06:26] Arguments: --nthreads 8
[2026-04-14 05:06:26] Threads: 8
[2026-04-14 05:06:26] Checking for CVMFS
[2026-04-14 05:06:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 05:06:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 05:06:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 05:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 05:06:32] 2.11.2.0 1008 18088 102164 158437 2 53 24500417 25165825 96 130560 0 7244882 99.927 2335901 2676 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-14 05:06:32] CVMFS is ok
[2026-04-14 05:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 05:06:32] Checking for apptainer binary...
[2026-04-14 05:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 05:06:32] Running /usr/bin/apptainer --version
[2026-04-14 05:06:32] apptainer version 1.3.2-1.el7
[2026-04-14 05:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 05:06:36] cg-vwn424.simple-grid.lan
[2026-04-14 05:06:36] apptainer works
[2026-04-14 05:06:36] Set ATHENA_PROC_NUMBER=8
[2026-04-14 05:06:36] Set ATHENA_CORE_NUMBER=8
[2026-04-14 05:06:36] Starting ATLAS job with PandaID=7089567215
[2026-04-14 05:06:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 09:06:05]  *** The last 200 lines of the pilot log: ***
[2026-04-14 09:06:05] 2026-04-14 07:05:19,504 | INFO     | this job has now completed (state=finished)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,504 | INFO     | log transfer has been attempted: DONE
[2026-04-14 09:06:05] 2026-04-14 07:05:19,504 | INFO     | job 7089567215 has finished - writing final server update
[2026-04-14 09:06:05] 2026-04-14 07:05:19,505 | INFO     | total number of processed events: 400 (read)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,507 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7089567215/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,507 | INFO     | extracted standard info from prmon json
[2026-04-14 09:06:05] 2026-04-14 07:05:19,507 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 09:06:05] 2026-04-14 07:05:19,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 09:06:05] 2026-04-14 07:05:19,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 09:06:05] 2026-04-14 07:05:19,512 | INFO     | fitting pss+swap vs Time
[2026-04-14 09:06:05] 2026-04-14 07:05:19,513 | INFO     | sum of square deviations: 3485088600.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,514 | INFO     | sum of deviations: 53226229265.500015
[2026-04-14 09:06:05] 2026-04-14 07:05:19,515 | INFO     | mean x (centered): 0.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,515 | INFO     | mean y: 2451106.8258928573
[2026-04-14 09:06:05] 2026-04-14 07:05:19,515 | INFO     | intersect: 2451106.8258928573
[2026-04-14 09:06:05] 2026-04-14 07:05:19,515 | INFO     | chi2: 9.09485775387016
[2026-04-14 09:06:05] 2026-04-14 07:05:19,516 | INFO     | sum of square deviations: 3256879670.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,518 | INFO     | sum of deviations: 82259728906.00006
[2026-04-14 09:06:05] 2026-04-14 07:05:19,518 | INFO     | mean x (centered): 0.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,518 | INFO     | mean y: 2470236.7442922373
[2026-04-14 09:06:05] 2026-04-14 07:05:19,518 | INFO     | intersect: 2470236.7442922373
[2026-04-14 09:06:05] 2026-04-14 07:05:19,519 | INFO     | chi2: 7.637853603264332
[2026-04-14 09:06:05] 2026-04-14 07:05:19,519 | INFO     | current chi2=7.637853603264332 (change=16.020087284881676 %)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,519 | INFO     | right removable region: 218
[2026-04-14 09:06:05] 2026-04-14 07:05:19,519 | INFO     | sum of square deviations: 3256879670.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,524 | INFO     | sum of deviations: -25337534498.000008
[2026-04-14 09:06:05] 2026-04-14 07:05:19,524 | INFO     | mean x (centered): 0.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,525 | INFO     | mean y: 2503572.0410958906
[2026-04-14 09:06:05] 2026-04-14 07:05:19,525 | INFO     | intersect: 2503572.0410958906
[2026-04-14 09:06:05] 2026-04-14 07:05:19,525 | INFO     | chi2: 4.0439522211577845
[2026-04-14 09:06:05] 2026-04-14 07:05:19,525 | INFO     | current chi2=4.0439522211577845 (change=55.53583870581208 %)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,526 | INFO     | sum of square deviations: 3038856977.5
[2026-04-14 09:06:05] 2026-04-14 07:05:19,527 | INFO     | sum of deviations: -75096228615.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,528 | INFO     | mean x (centered): 0.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,528 | INFO     | mean y: 2538242.523364486
[2026-04-14 09:06:05] 2026-04-14 07:05:19,528 | INFO     | intersect: 2538242.523364486
[2026-04-14 09:06:05] 2026-04-14 07:05:19,528 | INFO     | chi2: 1.9327879249322204
[2026-04-14 09:06:05] 2026-04-14 07:05:19,528 | INFO     | current chi2=1.9327879249322204 (change=52.20547080601109 %)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,529 | INFO     | sum of square deviations: 2830787960.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,530 | INFO     | sum of deviations: -80611190120.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,531 | INFO     | mean x (centered): 0.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,531 | INFO     | mean y: 2542230.301435407
[2026-04-14 09:06:05] 2026-04-14 07:05:19,531 | INFO     | intersect: 2542230.301435407
[2026-04-14 09:06:05] 2026-04-14 07:05:19,531 | INFO     | chi2: 1.8506077504781253
[2026-04-14 09:06:05] 2026-04-14 07:05:19,531 | INFO     | current chi2=1.8506077504781253 (change=4.251898172272419 %)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,531 | INFO     | left removable region: 15
[2026-04-14 09:06:05] 2026-04-14 07:05:19,532 | INFO     | sum of square deviations: 2593916542.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,533 | INFO     | sum of deviations: -50289426813.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,534 | INFO     | mean x (centered): 0.0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,534 | INFO     | mean y: 2565238.2463054187
[2026-04-14 09:06:05] 2026-04-14 07:05:19,534 | INFO     | intersect: 2565238.2463054187
[2026-04-14 09:06:05] 2026-04-14 07:05:19,534 | INFO     | chi2: 0.1943745451610306
[2026-04-14 09:06:05] 2026-04-14 07:05:19,534 | INFO     | current memory leak: -19.39 B/s (using 203 data points, chi2=0.19)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,535 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,535 | INFO     | ..............................
[2026-04-14 09:06:05] 2026-04-14 07:05:19,535 | INFO     | . Timing measurements:
[2026-04-14 09:06:05] 2026-04-14 07:05:19,535 | INFO     | . get job = 0 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,535 | INFO     | . initial setup = 116 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,536 | INFO     | . payload setup = 215 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,536 | INFO     | . stage-in = 0 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,536 | INFO     | . payload execution = 13729 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,536 | INFO     | . stage-out = 3 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,536 | INFO     | . log creation = 1 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,536 | INFO     | ..............................
[2026-04-14 09:06:05] 2026-04-14 07:05:19,702 | INFO     | 
[2026-04-14 09:06:05] 2026-04-14 07:05:19,702 | INFO     | job summary report
[2026-04-14 09:06:05] 2026-04-14 07:05:19,702 | INFO     | --------------------------------------------------
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | PanDA job id: 7089567215
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | task id: 49263200
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | errors: (none)
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | pilot state: finished 
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | transexitcode: 0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | exeerrorcode: 0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | exeerrordiag: 
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | exitcode: 0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | exitmsg: OK
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | cpuconsumptiontime: 51150 s
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | nevents: 400
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | neventsw: 0
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | pid: 21055
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | pgrp: 21055
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | corecount: 8
[2026-04-14 09:06:05] 2026-04-14 07:05:19,703 | INFO     | event service: False
[2026-04-14 09:06:05] 2026-04-14 07:05:19,704 | INFO     | sizes: {0: 2279062, 1: 2279747, 2: 2281576, 13: 2281576, 13948: 2311941, 13952: 2321123, 13953: 2321261}
[2026-04-14 09:06:05] 2026-04-14 07:05:19,704 | INFO     | --------------------------------------------------
[2026-04-14 09:06:05] 2026-04-14 07:05:19,704 | INFO     | 
[2026-04-14 09:06:05] 2026-04-14 07:05:19,704 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | job 7089567215 has completed (purged errors)
[2026-04-14 09:06:05] 2026-04-14 07:05:20,275 | INFO     | overall cleanup function is called
[2026-04-14 09:06:05] 2026-04-14 07:05:21,283 | INFO     | --- collectZombieJob: --- 10, [21055]
[2026-04-14 09:06:05] 2026-04-14 07:05:21,283 | INFO     | zombie collector waiting for pid 21055
[2026-04-14 09:06:05] 2026-04-14 07:05:21,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 09:06:05] 2026-04-14 07:05:21,284 | INFO     | collected zombie processes
[2026-04-14 09:06:05] 2026-04-14 07:05:21,284 | INFO     | will attempt to kill all subprocesses of pid=21055
[2026-04-14 09:06:05] 2026-04-14 07:05:21,340 | INFO     | process IDs to be killed: [21055] (in reverse order)
[2026-04-14 09:06:05] 2026-04-14 07:05:22,022 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 09:06:05] 2026-04-14 07:05:22,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 09:06:05] 2026-04-14 07:05:22,023 | INFO     | did not find any defunct processes belonging to 21055
[2026-04-14 09:06:05] 2026-04-14 07:05:22,025 | INFO     | did not find any defunct processes belonging to 21055
[2026-04-14 09:06:05] 2026-04-14 07:05:22,025 | INFO     | Ready for new job
[2026-04-14 09:06:05] 2026-04-14 07:05:22,026 | INFO     | **************************************
[2026-04-14 09:06:05] 2026-04-14 07:05:22,026 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 09:06:05] 2026-04-14 07:05:22,026 | INFO     | **************************************
[2026-04-14 09:06:05] 2026-04-14 07:05:22,026 | INFO     | 
[2026-04-14 09:06:05] 2026-04-14 07:05:22,027 | INFO     | pilot is running in a VM
[2026-04-14 09:06:05] 2026-04-14 07:05:22,027 | INFO     | architecture information:
[2026-04-14 09:06:05] 2026-04-14 07:05:22,030 | INFO     | executing command: cat /etc/os-release
[2026-04-14 09:06:05] 2026-04-14 07:05:22,238 | INFO     | cat /etc/os-release:
[2026-04-14 09:06:05] NAME="CentOS Linux"
[2026-04-14 09:06:05] VERSION="7 (Core)"
[2026-04-14 09:06:05] ID="centos"
[2026-04-14 09:06:05] ID_LIKE="rhel fedora"
[2026-04-14 09:06:05] VERSION_ID="7"
[2026-04-14 09:06:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 09:06:05] ANSI_COLOR="0;31"
[2026-04-14 09:06:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 09:06:05] HOME_URL="https://www.centos.org/"
[2026-04-14 09:06:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 09:06:05] 
[2026-04-14 09:06:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 09:06:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 09:06:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 09:06:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 09:06:05] 
[2026-04-14 09:06:05] 2026-04-14 07:05:22,238 | INFO     | **************************************
[2026-04-14 09:06:05] 2026-04-14 07:05:22,741 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-04-14 09:06:05] 2026-04-14 07:05:23,005 | INFO     | sufficient remaining disk space (496156803072 B)
[2026-04-14 09:06:05] 2026-04-14 07:05:23,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 09:06:05] 2026-04-14 07:05:23,005 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 09:06:05] 2026-04-14 07:05:23,006 | INFO     | update_server=False
[2026-04-14 09:06:05] 2026-04-14 07:05:23,006 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 09:06:05] 2026-04-14 07:05:23,288 | INFO     | all data control threads have been joined
[2026-04-14 09:06:05] 2026-04-14 07:05:23,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 09:06:05] 2026-04-14 07:05:23,582 | INFO     | aborting loop
[2026-04-14 09:06:05] 2026-04-14 07:05:24,011 | INFO     | [job] retrieve thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 09:06:05] 2026-04-14 07:05:24,127 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,149 | INFO     | all job control threads have been joined
[2026-04-14 09:06:05] 2026-04-14 07:05:24,202 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,290 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,293 | INFO     | [data] control thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,408 | INFO     | all payload control threads have been joined
[2026-04-14 09:06:05] 2026-04-14 07:05:24,567 | INFO     | [job] validate thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,588 | INFO     | [job] job monitor thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:24,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 09:06:05] 2026-04-14 07:05:24,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 09:06:05] 2026-04-14 07:05:24,966 | INFO     | [data] copytool_in thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:25,155 | INFO     | [job] control thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:25,163 | INFO     | [payload] failed_post thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:25,309 | INFO     | [payload] validate_post thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:25,414 | INFO     | [payload] control thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:25,510 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:25,716 | INFO     | [job] queue monitor thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:26,048 | INFO     | [data] copytool_out thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:28,649 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 09:06:05] 2026-04-14 07:05:51,865 | INFO     | PID=16619 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-14 09:06:05] 2026-04-14 07:05:51,865 | INFO     | .. there are 2 such processes running
[2026-04-14 09:06:05] 2026-04-14 07:05:51,865 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 09:06:05] 2026-04-14 07:05:51,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 09:06:05] 2026-04-14 07:05:51,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 09:06:05] 2026-04-14 07:05:55,907 | INFO     | [monitor] cgroup control has ended
[2026-04-14 09:06:05] 2026-04-14 07:05:57,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988507928384)>', '<ExcThread(monitor, started 139987941058304)>']
[2026-04-14 09:06:05] 2026-04-14 07:05:57,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 09:06:05] 2026-04-14 07:05:57,901 | INFO     | [monitor] control thread has ended
[2026-04-14 09:06:05] 2026-04-14 07:06:02,595 | INFO     | all workflow threads have been joined
[2026-04-14 09:06:05] 2026-04-14 07:06:02,595 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 09:06:05] 2026-04-14 07:06:02,596 | INFO     | traces error code: 0
[2026-04-14 09:06:05] 2026-04-14 07:06:02,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 09:06:05] 2026-04-14 07:06:02,795 [wrapper] ==== pilot stdout END ====
[2026-04-14 09:06:05] 2026-04-14 07:06:02,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 09:06:05] 2026-04-14 07:06:02,980 [wrapper] pilotpid: 16619
[2026-04-14 09:06:05] 2026-04-14 07:06:03,063 [wrapper] Pilot exit status: 0
[2026-04-14 09:06:05] 2026-04-14 07:06:03,507 [wrapper] pandaids: 7089567215
[2026-04-14 09:06:05] 2026-04-14 07:06:04,481 [wrapper] cleanup supervisor_pilot 27152 16620
[2026-04-14 09:06:05] 2026-04-14 07:06:04,539 [wrapper] Test setup, not cleaning
[2026-04-14 09:06:05] 2026-04-14 07:06:04,559 [wrapper] apfmon messages muted
[2026-04-14 09:06:05] 2026-04-14 07:06:04,640 [wrapper] ==== wrapper stdout END ====
[2026-04-14 09:06:05] 2026-04-14 07:06:04,659 [wrapper] ==== wrapper stderr END ====
[2026-04-14 09:06:05]  *** Error codes and diagnostics ***
[2026-04-14 09:06:05]     "exeErrorCode": 0,
[2026-04-14 09:06:05]     "pilotErrorCode": 0,
[2026-04-14 09:06:05]  *** Listing of results directory ***
[2026-04-14 09:06:05] total 416108
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc    644190 Apr 13 16:51 pilot3.tar.gz
[2026-04-14 09:06:05] -rwx------. 1 boinc boinc     36322 Apr 13 16:52 runpilot2-wrapper.sh
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc      5094 Apr 13 16:55 queuedata.json
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc       100 Apr 14 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 09:06:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 05:06 run_atlas
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc       105 Apr 14 05:06 job.xml
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc      6306 Apr 14 05:06 init_data.xml
[2026-04-14 09:06:05] -rw-r--r--. 2 boinc boinc 225213923 Apr 14 05:06 EVNT.49263198._001848.pool.root.1
[2026-04-14 09:06:05] -rw-r--r--. 2 boinc boinc     15665 Apr 14 05:06 start_atlas.sh
[2026-04-14 09:06:05] drwxrwx--x. 2 boinc boinc        68 Apr 14 05:06 shared
[2026-04-14 09:06:05] -rw-r--r--. 2 boinc boinc    656928 Apr 14 05:06 input.tar.gz
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc         0 Apr 14 05:06 boinc_lockfile
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc      2576 Apr 14 05:06 pandaJob.out
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc       415 Apr 14 05:12 workernode_map.json
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc    997512 Apr 14 05:12 agis_schedconf.cvmfs.json
[2026-04-14 09:06:05] drwx------. 5 boinc boinc      4096 Apr 14 05:12 pilot3
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc 193489924 Apr 14 09:03 HITS.49263200._064588.pool.root.1
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc       489 Apr 14 09:04 boinc_task_state.xml
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc        95 Apr 14 09:05 pilot_heartbeat.json
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc      1011 Apr 14 09:05 memory_monitor_summary.json
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc   1511579 Apr 14 09:05 agis_ddmendpoints.agis.ALL.json
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc    379865 Apr 14 09:05 log.49263200._064588.job.log.tgz.1
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc      6344 Apr 14 09:05 heartbeat_new.json
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc      6235 Apr 14 09:05 heartbeat.json
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc      8192 Apr 14 09:06 boinc_mmap_file
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc        28 Apr 14 09:06 wrapper_checkpoint.txt
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc      4879 Apr 14 09:06 pilotlog.txt
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc   1294758 Apr 14 09:06 log.49263200._064588.job.log.1
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc       357 Apr 14 09:06 output.list
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc       410 Apr 14 09:06 runtime_log
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc   1689600 Apr 14 09:06 result.tar.gz
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc      8438 Apr 14 09:06 runtime_log.err
[2026-04-14 09:06:05] -rw-------. 1 boinc boinc       656 Apr 14 09:06 03308f362302.diag
[2026-04-14 09:06:05] -rw-r--r--. 1 boinc boinc     20618 Apr 14 09:06 stderr.txt
[2026-04-14 09:06:06] HITS file was successfully produced:
[2026-04-14 09:06:06] -rw-------. 1 boinc boinc 193489924 Apr 14 09:03 shared/HITS.pool.root.1
[2026-04-14 09:06:06]  *** Contents of shared directory: ***
[2026-04-14 09:06:06] total 411204
[2026-04-14 09:06:06] -rw-r--r--. 2 boinc boinc 225213923 Apr 14 05:06 ATLAS.root_0
[2026-04-14 09:06:06] -rw-r--r--. 2 boinc boinc     15665 Apr 14 05:06 start_atlas.sh
[2026-04-14 09:06:06] -rw-r--r--. 2 boinc boinc    656928 Apr 14 05:06 input.tar.gz
[2026-04-14 09:06:06] -rw-------. 1 boinc boinc 193489924 Apr 14 09:03 HITS.pool.root.1
[2026-04-14 09:06:06] -rw-------. 1 boinc boinc   1689600 Apr 14 09:06 result.tar.gz
09:06:07 (12645): run_atlas exited; CPU time 51285.283246
09:06:07 (12645): called boinc_finish(0)

</stderr_txt>
]]>

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