Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:35:02 (3928661): wrapper (7.7.26015): starting
13:35:02 (3928661): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 13:35:02] Arguments: --nthreads 8
[2026-04-13 13:35:02] Threads: 8
[2026-04-13 13:35:02] Checking for CVMFS
[2026-04-13 13:35:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 13:35:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 13:35:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 13:35:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 13:35:03] 2.13.3.0 2033223 152569 160140 158424 1 555 26035294 40960001 45437 16776704 0 1090777124 99.706 893606343 32331 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-13 13:35:03] CVMFS is ok
[2026-04-13 13:35:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 13:35:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 13:35:03] Further information can be found at the LHC@home message board.
[2026-04-13 13:35:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 13:35:03] Checking for apptainer binary...
[2026-04-13 13:35:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 13:35:03] Running /usr/bin/apptainer --version
[2026-04-13 13:35:03] apptainer version 1.4.5-2.el9
[2026-04-13 13:35:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 13:35:03] c-212-17.aglt2.org
[2026-04-13 13:35:03] apptainer works
[2026-04-13 13:35:03] Set ATHENA_PROC_NUMBER=8
[2026-04-13 13:35:03] Set ATHENA_CORE_NUMBER=8
[2026-04-13 13:35:03] Starting ATLAS job with PandaID=7088168587
[2026-04-13 13:35:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 16:13:11]  *** The last 200 lines of the pilot log: ***
[2026-04-13 16:13:11] 2026-04-13 20:12:21,523 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7088168587/jobReport.json
[2026-04-13 16:13:11] 2026-04-13 20:12:21,525 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-13 16:13:11] 2026-04-13 20:12:21,525 | INFO     | this job has now completed (state=finished)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,525 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,525 | INFO     | log transfer has been attempted: DONE
[2026-04-13 16:13:11] 2026-04-13 20:12:21,525 | INFO     | job 7088168587 has finished - writing final server update
[2026-04-13 16:13:11] 2026-04-13 20:12:21,526 | INFO     | total number of processed events: 400 (read)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,539 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7088168587/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,539 | INFO     | extracted standard info from prmon json
[2026-04-13 16:13:11] 2026-04-13 20:12:21,539 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 16:13:11] 2026-04-13 20:12:21,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 16:13:11] 2026-04-13 20:12:21,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 16:13:11] 2026-04-13 20:12:21,542 | INFO     | fitting pss+swap vs Time
[2026-04-13 16:13:11] 2026-04-13 20:12:21,542 | INFO     | sum of square deviations: 1110536476.9934604
[2026-04-13 16:13:11] 2026-04-13 20:12:21,543 | INFO     | sum of deviations: 9349757409.614374
[2026-04-13 16:13:11] 2026-04-13 20:12:21,543 | INFO     | mean x (centered): 0.0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,543 | INFO     | mean y: 2501823.385620915
[2026-04-13 16:13:11] 2026-04-13 20:12:21,543 | INFO     | intersect: 2501823.385620915
[2026-04-13 16:13:11] 2026-04-13 20:12:21,544 | INFO     | chi2: 2.475309176676376
[2026-04-13 16:13:11] 2026-04-13 20:12:21,544 | INFO     | sum of square deviations: 1005176666.9932436
[2026-04-13 16:13:11] 2026-04-13 20:12:21,544 | INFO     | sum of deviations: 8980740486.425682
[2026-04-13 16:13:11] 2026-04-13 20:12:21,545 | INFO     | mean x (centered): 0.0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,545 | INFO     | mean y: 2501290.0743243243
[2026-04-13 16:13:11] 2026-04-13 20:12:21,545 | INFO     | intersect: 2501290.0743243243
[2026-04-13 16:13:11] 2026-04-13 20:12:21,545 | INFO     | chi2: 2.4777379256945173
[2026-04-13 16:13:11] 2026-04-13 20:12:21,545 | INFO     | current chi2=2.4777379256945173 (change=-0.09811901644555336 %)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,545 | INFO     | right removable region: 147
[2026-04-13 16:13:11] 2026-04-13 20:12:21,546 | INFO     | sum of square deviations: 1005176056.9932436
[2026-04-13 16:13:11] 2026-04-13 20:12:21,546 | INFO     | sum of deviations: -22328378563.087852
[2026-04-13 16:13:11] 2026-04-13 20:12:21,546 | INFO     | mean x (centered): 0.0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,546 | INFO     | mean y: 2547144.5878378376
[2026-04-13 16:13:11] 2026-04-13 20:12:21,546 | INFO     | intersect: 2547144.5878378376
[2026-04-13 16:13:11] 2026-04-13 20:12:21,547 | INFO     | chi2: 0.19944325301897278
[2026-04-13 16:13:11] 2026-04-13 20:12:21,547 | INFO     | current chi2=0.19944325301897278 (change=91.94269326441203 %)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,547 | INFO     | sum of square deviations: 906699486.9930037
[2026-04-13 16:13:11] 2026-04-13 20:12:21,547 | INFO     | sum of deviations: -18204456348.992996
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | mean x (centered): 0.0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | mean y: 2540696.993006993
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | intersect: 2540696.993006993
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | chi2: 0.1844693057712962
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | current chi2=0.1844693057712962 (change=7.507873553512555 %)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | left removable region: 10
[2026-04-13 16:13:11] 2026-04-13 20:12:21,548 | INFO     | sum of square deviations: 797287568.9927018
[2026-04-13 16:13:11] 2026-04-13 20:12:21,549 | INFO     | sum of deviations: -17595415069.759125
[2026-04-13 16:13:11] 2026-04-13 20:12:21,549 | INFO     | mean x (centered): 0.0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,549 | INFO     | mean y: 2541717.7591240876
[2026-04-13 16:13:11] 2026-04-13 20:12:21,549 | INFO     | intersect: 2541717.7591240876
[2026-04-13 16:13:11] 2026-04-13 20:12:21,549 | INFO     | chi2: 0.18028168584800003
[2026-04-13 16:13:11] 2026-04-13 20:12:21,549 | INFO     | current memory leak: -22.07 B/s (using 137 data points, chi2=0.18)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | could have reported an average CPU frequency of 3262 MHz (9 samples)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | ..............................
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | . Timing measurements:
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | . get job = 0 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | . initial setup = 19 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | . payload setup = 38 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,550 | INFO     | . stage-in = 0 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,551 | INFO     | . payload execution = 9334 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,551 | INFO     | . stage-out = 0 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,551 | INFO     | . log creation = 0 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,551 | INFO     | ..............................
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | 
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | job summary report
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | --------------------------------------------------
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | PanDA job id: 7088168587
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | task id: 49263191
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | errors: (none)
[2026-04-13 16:13:11] 2026-04-13 20:12:21,951 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | pilot state: finished 
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | transexitcode: 0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | exeerrorcode: 0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | exeerrordiag: 
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | exitcode: 0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | exitmsg: OK
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | cpuconsumptiontime: 31873 s
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | nevents: 400
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | neventsw: 0
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | pid: 3951925
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | pgrp: 3951925
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | corecount: 8
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | event service: False
[2026-04-13 16:13:11] 2026-04-13 20:12:21,952 | INFO     | sizes: {0: 2279721, 1: 2281550, 12: 2281550, 9376: 2309763, 9377: 2318761, 9379: 2318817, 9381: 2319203}
[2026-04-13 16:13:11] 2026-04-13 20:12:21,953 | INFO     | --------------------------------------------------
[2026-04-13 16:13:11] 2026-04-13 20:12:21,953 | INFO     | 
[2026-04-13 16:13:11] 2026-04-13 20:12:21,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 16:13:11] 2026-04-13 20:12:22,002 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,002 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,002 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,002 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,007 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 16:13:11] 2026-04-13 20:12:22,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,008 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 16:13:11] 2026-04-13 20:12:22,008 | INFO     | job 7088168587 has completed (purged errors)
[2026-04-13 16:13:11] 2026-04-13 20:12:22,008 | INFO     | overall cleanup function is called
[2026-04-13 16:13:11] 2026-04-13 20:12:22,597 | WARNING  | process 3951925 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 16:13:11] 2026-04-13 20:12:23,019 | INFO     | --- collectZombieJob: --- 10, [3951925]
[2026-04-13 16:13:11] 2026-04-13 20:12:23,019 | INFO     | zombie collector waiting for pid 3951925
[2026-04-13 16:13:11] 2026-04-13 20:12:23,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 16:13:11] 2026-04-13 20:12:23,020 | INFO     | collected zombie processes
[2026-04-13 16:13:11] 2026-04-13 20:12:23,020 | INFO     | will attempt to kill all subprocesses of pid=3951925
[2026-04-13 16:13:11] 2026-04-13 20:12:23,074 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 16:13:11] 2026-04-13 20:12:24,428 | INFO     | process IDs to be killed: [3951925] (in reverse order)
[2026-04-13 16:13:11] 2026-04-13 20:12:24,492 | INFO     | number of running child processes to parent process 3951925: 1
[2026-04-13 16:13:11] 2026-04-13 20:12:24,493 | INFO     | maximum number of monitored processes: 6
[2026-04-13 16:13:11] 2026-04-13 20:12:24,493 | INFO     | aborting job monitoring since job object (job id=7088168587) has expired
[2026-04-13 16:13:11] 2026-04-13 20:12:24,705 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 16:13:11] 2026-04-13 20:12:24,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 16:13:11] 2026-04-13 20:12:24,732 | INFO     | did not find any defunct processes belonging to 3951925
[2026-04-13 16:13:11] 2026-04-13 20:12:24,759 | INFO     | did not find any defunct processes belonging to 3951925
[2026-04-13 16:13:11] 2026-04-13 20:12:24,760 | INFO     | Ready for new job
[2026-04-13 16:13:11] 2026-04-13 20:12:24,761 | INFO     | **************************************
[2026-04-13 16:13:11] 2026-04-13 20:12:24,761 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 16:13:11] 2026-04-13 20:12:24,761 | INFO     | **************************************
[2026-04-13 16:13:11] 2026-04-13 20:12:24,761 | INFO     | 
[2026-04-13 16:13:11] 2026-04-13 20:12:24,766 | INFO     | architecture information:
[2026-04-13 16:13:11] 2026-04-13 20:12:24,766 | INFO     | executing command: cat /etc/os-release
[2026-04-13 16:13:11] 2026-04-13 20:12:24,793 | INFO     | cat /etc/os-release:
[2026-04-13 16:13:11] NAME="CentOS Linux"
[2026-04-13 16:13:11] VERSION="7 (Core)"
[2026-04-13 16:13:11] ID="centos"
[2026-04-13 16:13:11] ID_LIKE="rhel fedora"
[2026-04-13 16:13:11] VERSION_ID="7"
[2026-04-13 16:13:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 16:13:11] ANSI_COLOR="0;31"
[2026-04-13 16:13:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 16:13:11] HOME_URL="https://www.centos.org/"
[2026-04-13 16:13:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 16:13:11] 
[2026-04-13 16:13:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 16:13:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 16:13:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 16:13:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 16:13:11] 
[2026-04-13 16:13:11] 2026-04-13 20:12:24,793 | INFO     | **************************************
[2026-04-13 16:13:11] 2026-04-13 20:12:25,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 16:13:11] 2026-04-13 20:12:25,322 | INFO     | sufficient remaining disk space (126695243776 B)
[2026-04-13 16:13:11] 2026-04-13 20:12:25,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 16:13:11] 2026-04-13 20:12:25,322 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 16:13:11] 2026-04-13 20:12:25,322 | INFO     | update_server=False
[2026-04-13 16:13:11] 2026-04-13 20:12:25,323 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 16:13:11] 2026-04-13 20:12:25,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 16:13:11] 2026-04-13 20:12:25,323 | INFO     | will abort loop
[2026-04-13 16:13:11] 2026-04-13 20:12:25,700 | INFO     | all data control threads have been joined
[2026-04-13 16:13:11] 2026-04-13 20:12:25,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 16:13:11] 2026-04-13 20:12:25,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 16:13:11] 2026-04-13 20:12:25,905 | INFO     | all payload control threads have been joined
[2026-04-13 16:13:11] 2026-04-13 20:12:26,328 | INFO     | [job] retrieve thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:26,344 | INFO     | [job] job monitor thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:26,488 | INFO     | all job control threads have been joined
[2026-04-13 16:13:11] 2026-04-13 20:12:26,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 16:13:11] 2026-04-13 20:12:26,705 | INFO     | [data] control thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:26,911 | INFO     | [payload] control thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,011 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,028 | INFO     | [payload] failed_post thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,193 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,414 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,447 | INFO     | [data] copytool_in thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,494 | INFO     | [job] control thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,551 | INFO     | [job] validate thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,590 | INFO     | [payload] validate_post thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,651 | INFO     | [job] queue monitor thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:27,724 | INFO     | [data] copytool_out thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:29,889 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:35,797 | INFO     | job.realtimelogging is not enabled
[2026-04-13 16:13:11] 2026-04-13 20:12:36,802 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 16:13:11] 2026-04-13 20:12:55,816 | INFO     | PID=3937053 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 16:13:11] 2026-04-13 20:12:55,816 | INFO     | .. there are 53 such processes running
[2026-04-13 16:13:11] 2026-04-13 20:12:55,817 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 16:13:11] 2026-04-13 20:12:55,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 16:13:11] 2026-04-13 20:12:55,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 16:13:11] 2026-04-13 20:13:03,847 | INFO     | [monitor] cgroup control has ended
[2026-04-13 16:13:11] 2026-04-13 20:13:05,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284395525952)>', '<ExcThread(monitor, started 140284112680704)>']
[2026-04-13 16:13:11] 2026-04-13 20:13:05,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 16:13:11] 2026-04-13 20:13:05,873 | INFO     | [monitor] control thread has ended
[2026-04-13 16:13:11] 2026-04-13 20:13:10,447 | INFO     | all workflow threads have been joined
[2026-04-13 16:13:11] 2026-04-13 20:13:10,448 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 16:13:11] 2026-04-13 20:13:10,448 | INFO     | traces error code: 0
[2026-04-13 16:13:11] 2026-04-13 20:13:10,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 16:13:11] 2026-04-13 20:13:10,617 [wrapper] ==== pilot stdout END ====
[2026-04-13 16:13:11] 2026-04-13 20:13:10,875 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 16:13:11] 2026-04-13 20:13:10,892 [wrapper] pilotpid: 3937053
[2026-04-13 16:13:11] 2026-04-13 20:13:10,899 [wrapper] Pilot exit status: 0
[2026-04-13 16:13:11] 2026-04-13 20:13:10,934 [wrapper] pandaids: 7088168587
[2026-04-13 16:13:11] 2026-04-13 20:13:11,100 [wrapper] cleanup supervisor_pilot 1701872 3937054
[2026-04-13 16:13:11] 2026-04-13 20:13:11,104 [wrapper] Test setup, not cleaning
[2026-04-13 16:13:11] 2026-04-13 20:13:11,111 [wrapper] apfmon messages muted
[2026-04-13 16:13:11] 2026-04-13 20:13:11,117 [wrapper] ==== wrapper stdout END ====
[2026-04-13 16:13:11] 2026-04-13 20:13:11,124 [wrapper] ==== wrapper stderr END ====
[2026-04-13 16:13:11]  *** Error codes and diagnostics ***
[2026-04-13 16:13:11]     "exeErrorCode": 0,
[2026-04-13 16:13:11]     "pilotErrorCode": 0,
[2026-04-13 16:13:11]  *** Listing of results directory ***
[2026-04-13 16:13:11] total 420432
[2026-04-13 16:13:11] -rwx------. 1 boincer umatlas     36322 Apr 13 09:28 runpilot2-wrapper.sh
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 09:32 pilot3.tar.gz
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 09:32 queuedata.json
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas       100 Apr 13 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 16:13:11] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 13:35 run_atlas
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas       105 Apr 13 13:35 job.xml
[2026-04-13 16:13:11] -rw-r--r--. 2 boincer umatlas 227126722 Apr 13 13:35 EVNT.49263189._001492.pool.root.1
[2026-04-13 16:13:11] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 13:35 start_atlas.sh
[2026-04-13 16:13:11] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 13:35 shared
[2026-04-13 16:13:11] -rw-r--r--. 2 boincer umatlas    656922 Apr 13 13:35 input.tar.gz
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas         0 Apr 13 13:35 boinc_lockfile
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 13:35 pandaJob.out
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas        57 Apr 13 13:35 setup.sh.local
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas    997526 Apr 13 13:35 agis_schedconf.cvmfs.json
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas   1511579 Apr 13 13:35 agis_ddmendpoints.agis.ALL.json
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas       430 Apr 13 13:35 workernode_map.json
[2026-04-13 16:13:11] drwx------. 5 boincer umatlas      4096 Apr 13 13:35 pilot3
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas      6873 Apr 13 16:11 init_data.xml
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas 197094930 Apr 13 16:11 HITS.49263191._058221.pool.root.1
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas       487 Apr 13 16:11 boinc_task_state.xml
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas        95 Apr 13 16:12 pilot_heartbeat.json
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas      1045 Apr 13 16:12 memory_monitor_summary.json
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas    342426 Apr 13 16:12 log.49263191._058221.job.log.tgz.1
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas      6373 Apr 13 16:12 heartbeat_new.json
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas      6264 Apr 13 16:12 heartbeat.json
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas      4894 Apr 13 16:13 pilotlog.txt
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 16:13 boinc_mmap_file
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas    776789 Apr 13 16:13 log.49263191._058221.job.log.1
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas       357 Apr 13 16:13 output.list
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas       410 Apr 13 16:13 runtime_log
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas   1136640 Apr 13 16:13 result.tar.gz
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas        27 Apr 13 16:13 wrapper_checkpoint.txt
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas      8963 Apr 13 16:13 runtime_log.err
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas       658 Apr 13 16:13 ef6898137329.diag
[2026-04-13 16:13:11] -rw-r--r--. 1 boincer umatlas     21266 Apr 13 16:13 stderr.txt
[2026-04-13 16:13:11] HITS file was successfully produced:
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas 197094930 Apr 13 16:11 shared/HITS.pool.root.1
[2026-04-13 16:13:11]  *** Contents of shared directory: ***
[2026-04-13 16:13:11] total 416060
[2026-04-13 16:13:11] -rw-r--r--. 2 boincer umatlas 227126722 Apr 13 13:35 ATLAS.root_0
[2026-04-13 16:13:11] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 13:35 start_atlas.sh
[2026-04-13 16:13:11] -rw-r--r--. 2 boincer umatlas    656922 Apr 13 13:35 input.tar.gz
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas 197094930 Apr 13 16:11 HITS.pool.root.1
[2026-04-13 16:13:11] -rw-------. 1 boincer umatlas   1136640 Apr 13 16:13 result.tar.gz
16:13:13 (3928661): run_atlas exited; CPU time 32332.795253
16:13:13 (3928661): called boinc_finish(0)

</stderr_txt>
]]>

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