Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:23 (315959): wrapper (7.7.26015): starting
16:28:23 (315959): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 16:28:23] Arguments: --nthreads 8
[2026-04-13 16:28:23] Threads: 8
[2026-04-13 16:28:23] Checking for CVMFS
[2026-04-13 16:28:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 16:28:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 16:28:25] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 16:28:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 16:28:27] 2.13.3.0 12442 18980 357856 158428 3 58 25242771 32935936 30044 16776704 0 30129308 99.411 50013061 14778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 16:28:27] CVMFS is ok
[2026-04-13 16:28:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 16:28:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 16:28:27] Further information can be found at the LHC@home message board.
[2026-04-13 16:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 16:28:27] Checking for apptainer binary...
[2026-04-13 16:28:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 16:28:27] Running /usr/bin/apptainer --version
[2026-04-13 16:28:27] apptainer version 1.4.5-3.el9
[2026-04-13 16:28:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 16:28:29] c6-12-25-4.aglt2.org
[2026-04-13 16:28:29] apptainer works
[2026-04-13 16:28:29] Set ATHENA_PROC_NUMBER=8
[2026-04-13 16:28:29] Set ATHENA_CORE_NUMBER=8
[2026-04-13 16:28:29] Starting ATLAS job with PandaID=7088145523
[2026-04-13 16:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 22:05:08]  *** The last 200 lines of the pilot log: ***
[2026-04-13 22:05:08] 2026-04-14 02:04:26,016 | INFO     | monitor loop #927: job 0:7088145523 is in state 'finished'
[2026-04-13 22:05:08] 2026-04-14 02:04:26,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 22:05:08] 2026-04-14 02:04:26,136 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-13 22:05:08] 2026-04-14 02:04:27,195 | INFO     | job 7088145523 has state=finished
[2026-04-13 22:05:08] 2026-04-14 02:04:27,195 | INFO     | preparing for final server update for job 7088145523 in state='finished'
[2026-04-13 22:05:08] 2026-04-14 02:04:27,488 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,489 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7088145523/jobReport.json
[2026-04-13 22:05:08] 2026-04-14 02:04:27,495 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-04-13 22:05:08] 2026-04-14 02:04:27,497 | INFO     | this job has now completed (state=finished)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,497 | INFO     | log transfer has been attempted: DONE
[2026-04-13 22:05:08] 2026-04-14 02:04:27,498 | INFO     | job 7088145523 has finished - writing final server update
[2026-04-13 22:05:08] 2026-04-14 02:04:27,498 | INFO     | total number of processed events: 400 (read)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,540 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7088145523/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,542 | INFO     | extracted standard info from prmon json
[2026-04-13 22:05:08] 2026-04-14 02:04:27,542 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 22:05:08] 2026-04-14 02:04:27,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 22:05:08] 2026-04-14 02:04:27,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 22:05:08] 2026-04-14 02:04:27,557 | INFO     | fitting pss+swap vs Time
[2026-04-13 22:05:08] 2026-04-14 02:04:27,559 | INFO     | sum of square deviations: 10842596117.321102
[2026-04-13 22:05:08] 2026-04-14 02:04:27,572 | INFO     | sum of deviations: 421017610.1559372
[2026-04-13 22:05:08] 2026-04-14 02:04:27,573 | INFO     | mean x (centered): 0.0
[2026-04-13 22:05:08] 2026-04-14 02:04:27,573 | INFO     | mean y: 2512346.7553516817
[2026-04-13 22:05:08] 2026-04-14 02:04:27,573 | INFO     | intersect: 2512346.7553516817
[2026-04-13 22:05:08] 2026-04-14 02:04:27,575 | INFO     | chi2: 3.7686457647189946
[2026-04-13 22:05:08] 2026-04-14 02:04:27,576 | INFO     | sum of square deviations: 10352804149.602526
[2026-04-13 22:05:08] 2026-04-14 02:04:27,582 | INFO     | sum of deviations: 20536133791.37265
[2026-04-13 22:05:08] 2026-04-14 02:04:27,583 | INFO     | mean x (centered): 0.0
[2026-04-13 22:05:08] 2026-04-14 02:04:27,583 | INFO     | mean y: 2518531.7763975156
[2026-04-13 22:05:08] 2026-04-14 02:04:27,583 | INFO     | intersect: 2518531.7763975156
[2026-04-13 22:05:08] 2026-04-14 02:04:27,585 | INFO     | chi2: 3.093431643452654
[2026-04-13 22:05:08] 2026-04-14 02:04:27,585 | INFO     | current chi2=3.093431643452654 (change=17.916624788339245 %)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,585 | INFO     | right removable region: 321
[2026-04-13 22:05:08] 2026-04-14 02:04:27,586 | INFO     | sum of square deviations: 10352776334.235981
[2026-04-13 22:05:08] 2026-04-14 02:04:27,593 | INFO     | sum of deviations: -82011466389.64597
[2026-04-13 22:05:08] 2026-04-14 02:04:27,593 | INFO     | mean x (centered): 0.0
[2026-04-13 22:05:08] 2026-04-14 02:04:27,594 | INFO     | mean y: 2537946.267080745
[2026-04-13 22:05:08] 2026-04-14 02:04:27,595 | INFO     | intersect: 2537946.267080745
[2026-04-13 22:05:08] 2026-04-14 02:04:27,596 | INFO     | chi2: 1.2559551321739573
[2026-04-13 22:05:08] 2026-04-14 02:04:27,596 | INFO     | current chi2=1.2559551321739573 (change=66.67356895328669 %)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,610 | INFO     | sum of square deviations: 9877933576.132414
[2026-04-13 22:05:08] 2026-04-14 02:04:27,626 | INFO     | sum of deviations: -97622286926.47958
[2026-04-13 22:05:08] 2026-04-14 02:04:27,627 | INFO     | mean x (centered): 0.0
[2026-04-13 22:05:08] 2026-04-14 02:04:27,627 | INFO     | mean y: 2542947.5899053626
[2026-04-13 22:05:08] 2026-04-14 02:04:27,627 | INFO     | intersect: 2542947.5899053626
[2026-04-13 22:05:08] 2026-04-14 02:04:27,629 | INFO     | chi2: 1.1302839916759093
[2026-04-13 22:05:08] 2026-04-14 02:04:27,629 | INFO     | current chi2=1.1302839916759093 (change=10.00602149541133 %)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,629 | INFO     | left removable region: 10
[2026-04-13 22:05:08] 2026-04-14 02:04:27,639 | INFO     | sum of square deviations: 9327587914.495178
[2026-04-13 22:05:08] 2026-04-14 02:04:27,662 | INFO     | sum of deviations: -76372147364.0161
[2026-04-13 22:05:08] 2026-04-14 02:04:27,663 | INFO     | mean x (centered): 0.0
[2026-04-13 22:05:08] 2026-04-14 02:04:27,663 | INFO     | mean y: 2549910.1575562702
[2026-04-13 22:05:08] 2026-04-14 02:04:27,663 | INFO     | intersect: 2549910.1575562702
[2026-04-13 22:05:08] 2026-04-14 02:04:27,665 | INFO     | chi2: 0.43033516155797324
[2026-04-13 22:05:08] 2026-04-14 02:04:27,665 | INFO     | current memory leak: -8.19 B/s (using 311 data points, chi2=0.43)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,675 | INFO     | could have reported an average CPU frequency of 1000 MHz (15 samples)
[2026-04-13 22:05:08] 2026-04-14 02:04:27,675 | INFO     | ..............................
[2026-04-13 22:05:08] 2026-04-14 02:04:27,676 | INFO     | . Timing measurements:
[2026-04-13 22:05:08] 2026-04-14 02:04:27,676 | INFO     | . get job = 0 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,676 | INFO     | . initial setup = 40 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,676 | INFO     | . payload setup = 60 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,676 | INFO     | . stage-in = 1 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,677 | INFO     | . payload execution = 19949 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,677 | INFO     | . stage-out = 10 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,677 | INFO     | . log creation = 1 s
[2026-04-13 22:05:08] 2026-04-14 02:04:27,677 | INFO     | ..............................
[2026-04-13 22:05:08] 2026-04-14 02:04:28,432 | INFO     | 
[2026-04-13 22:05:08] 2026-04-14 02:04:28,433 | INFO     | job summary report
[2026-04-13 22:05:08] 2026-04-14 02:04:28,434 | INFO     | --------------------------------------------------
[2026-04-13 22:05:08] 2026-04-14 02:04:28,434 | INFO     | PanDA job id: 7088145523
[2026-04-13 22:05:08] 2026-04-14 02:04:28,434 | INFO     | task id: 49263191
[2026-04-13 22:05:08] 2026-04-14 02:04:28,434 | INFO     | errors: (none)
[2026-04-13 22:05:08] 2026-04-14 02:04:28,442 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 22:05:08] 2026-04-14 02:04:28,443 | INFO     | pilot state: finished 
[2026-04-13 22:05:08] 2026-04-14 02:04:28,443 | INFO     | transexitcode: 0
[2026-04-13 22:05:08] 2026-04-14 02:04:28,443 | INFO     | exeerrorcode: 0
[2026-04-13 22:05:08] 2026-04-14 02:04:28,443 | INFO     | exeerrordiag: 
[2026-04-13 22:05:08] 2026-04-14 02:04:28,450 | INFO     | exitcode: 0
[2026-04-13 22:05:08] 2026-04-14 02:04:28,451 | INFO     | exitmsg: OK
[2026-04-13 22:05:08] 2026-04-14 02:04:28,451 | INFO     | cpuconsumptiontime: 113268 s
[2026-04-13 22:05:08] 2026-04-14 02:04:28,468 | INFO     | nevents: 400
[2026-04-13 22:05:08] 2026-04-14 02:04:28,468 | INFO     | neventsw: 0
[2026-04-13 22:05:08] 2026-04-14 02:04:28,468 | INFO     | pid: 329736
[2026-04-13 22:05:08] 2026-04-14 02:04:28,469 | INFO     | pgrp: 329736
[2026-04-13 22:05:08] 2026-04-14 02:04:28,469 | INFO     | corecount: 8
[2026-04-13 22:05:08] 2026-04-14 02:04:28,469 | INFO     | event service: False
[2026-04-13 22:05:08] 2026-04-14 02:04:28,469 | INFO     | sizes: {0: 2279665, 1: 2279721, 2: 2279749, 3: 2268395, 5: 2281606, 6: 2281662, 20016: 2314357, 20018: 2314356, 20031: 2323410, 20036: 2323466, 20037: 2323660}
[2026-04-13 22:05:08] 2026-04-14 02:04:28,469 | INFO     | --------------------------------------------------
[2026-04-13 22:05:08] 2026-04-14 02:04:28,469 | INFO     | 
[2026-04-13 22:05:08] 2026-04-14 02:04:28,470 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-04-13 22:05:08] 2026-04-14 02:04:28,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,545 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,551 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 22:05:08] 2026-04-14 02:04:28,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,551 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 22:05:08] 2026-04-14 02:04:28,552 | INFO     | job 7088145523 has completed (purged errors)
[2026-04-13 22:05:08] 2026-04-14 02:04:28,552 | INFO     | overall cleanup function is called
[2026-04-13 22:05:08] 2026-04-14 02:04:29,565 | INFO     | --- collectZombieJob: --- 10, [329736]
[2026-04-13 22:05:08] 2026-04-14 02:04:29,566 | INFO     | zombie collector waiting for pid 329736
[2026-04-13 22:05:08] 2026-04-14 02:04:29,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 22:05:08] 2026-04-14 02:04:29,566 | INFO     | collected zombie processes
[2026-04-13 22:05:08] 2026-04-14 02:04:29,566 | INFO     | will attempt to kill all subprocesses of pid=329736
[2026-04-13 22:05:08] 2026-04-14 02:04:32,146 | INFO     | process IDs to be killed: [329736] (in reverse order)
[2026-04-13 22:05:08] 2026-04-14 02:04:32,663 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 22:05:08] 2026-04-14 02:04:32,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 22:05:08] 2026-04-14 02:04:32,817 | INFO     | did not find any defunct processes belonging to 329736
[2026-04-13 22:05:08] 2026-04-14 02:04:32,920 | INFO     | did not find any defunct processes belonging to 329736
[2026-04-13 22:05:08] 2026-04-14 02:04:32,920 | INFO     | Ready for new job
[2026-04-13 22:05:08] 2026-04-14 02:04:32,936 | INFO     | **************************************
[2026-04-13 22:05:08] 2026-04-14 02:04:32,958 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 22:05:08] 2026-04-14 02:04:32,958 | INFO     | **************************************
[2026-04-13 22:05:08] 2026-04-14 02:04:32,959 | INFO     | 
[2026-04-13 22:05:08] 2026-04-14 02:04:33,017 | INFO     | architecture information:
[2026-04-13 22:05:08] 2026-04-14 02:04:33,018 | INFO     | executing command: cat /etc/os-release
[2026-04-13 22:05:08] 2026-04-14 02:04:33,155 | INFO     | cat /etc/os-release:
[2026-04-13 22:05:08] NAME="CentOS Linux"
[2026-04-13 22:05:08] VERSION="7 (Core)"
[2026-04-13 22:05:08] ID="centos"
[2026-04-13 22:05:08] ID_LIKE="rhel fedora"
[2026-04-13 22:05:08] VERSION_ID="7"
[2026-04-13 22:05:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 22:05:08] ANSI_COLOR="0;31"
[2026-04-13 22:05:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 22:05:08] HOME_URL="https://www.centos.org/"
[2026-04-13 22:05:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 22:05:08] 
[2026-04-13 22:05:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 22:05:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 22:05:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 22:05:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 22:05:08] 
[2026-04-13 22:05:08] 2026-04-14 02:04:33,164 | INFO     | **************************************
[2026-04-13 22:05:08] 2026-04-14 02:04:33,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-04-13 22:05:08] 2026-04-14 02:04:33,824 | INFO     | sufficient remaining disk space (93460627456 B)
[2026-04-13 22:05:08] 2026-04-14 02:04:33,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 22:05:08] 2026-04-14 02:04:33,825 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 22:05:08] 2026-04-14 02:04:33,825 | INFO     | update_server=False
[2026-04-13 22:05:08] 2026-04-14 02:04:33,825 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 22:05:08] 2026-04-14 02:04:33,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 22:05:08] 2026-04-14 02:04:33,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 22:05:08] 2026-04-14 02:04:33,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 22:05:08] 2026-04-14 02:04:33,907 | INFO     | all payload control threads have been joined
[2026-04-13 22:05:08] 2026-04-14 02:04:34,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 22:05:08] 2026-04-14 02:04:34,733 | INFO     | aborting loop
[2026-04-13 22:05:08] 2026-04-14 02:04:34,751 | INFO     | all data control threads have been joined
[2026-04-13 22:05:08] 2026-04-14 02:04:34,833 | INFO     | [job] retrieve thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:34,840 | INFO     | all job control threads have been joined
[2026-04-13 22:05:08] 2026-04-14 02:04:34,844 | INFO     | [job] queue monitor thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:34,913 | INFO     | [payload] control thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:34,961 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:34,965 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:34,968 | INFO     | [job] validate thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,416 | INFO     | [data] copytool_in thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,464 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,468 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,740 | INFO     | [job] job monitor thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,757 | INFO     | [data] control thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,844 | INFO     | [data] copytool_out thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:35,846 | INFO     | [job] control thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:36,123 | INFO     | [payload] validate_post thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:36,341 | INFO     | [payload] failed_post thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:37,836 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 22:05:08] 2026-04-14 02:04:59,517 | INFO     | [monitor] cgroup control has ended
[2026-04-13 22:05:08] 2026-04-14 02:05:01,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126219880256)>', '<ExcThread(monitor, started 140125824595712)>']
[2026-04-13 22:05:08] 2026-04-14 02:05:02,683 | INFO     | PID=320939 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 22:05:08] 2026-04-14 02:05:02,685 | INFO     | .. there are 32 such processes running
[2026-04-13 22:05:08] 2026-04-14 02:05:02,690 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 22:05:08] 2026-04-14 02:05:02,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 22:05:08] 2026-04-14 02:05:02,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 22:05:08] 2026-04-14 02:05:02,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 22:05:08] 2026-04-14 02:05:02,694 | INFO     | [monitor] control thread has ended
[2026-04-13 22:05:08] 2026-04-14 02:05:06,370 | INFO     | all workflow threads have been joined
[2026-04-13 22:05:08] 2026-04-14 02:05:06,370 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 22:05:08] 2026-04-14 02:05:06,371 | INFO     | traces error code: 0
[2026-04-13 22:05:08] 2026-04-14 02:05:06,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 22:05:08] 2026-04-14 02:05:07,346 [wrapper] ==== pilot stdout END ====
[2026-04-13 22:05:08] 2026-04-14 02:05:07,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 22:05:08] 2026-04-14 02:05:07,377 [wrapper] pilotpid: 320939
[2026-04-13 22:05:08] 2026-04-14 02:05:07,387 [wrapper] Pilot exit status: 0
[2026-04-13 22:05:08] 2026-04-14 02:05:07,420 [wrapper] pandaids: 7088145523
[2026-04-13 22:05:08] 2026-04-14 02:05:07,715 [wrapper] cleanup supervisor_pilot 1124089 320940
[2026-04-13 22:05:08] 2026-04-14 02:05:07,736 [wrapper] Test setup, not cleaning
[2026-04-13 22:05:08] 2026-04-14 02:05:07,746 [wrapper] apfmon messages muted
[2026-04-13 22:05:08] 2026-04-14 02:05:07,752 [wrapper] ==== wrapper stdout END ====
[2026-04-13 22:05:08] 2026-04-14 02:05:07,768 [wrapper] ==== wrapper stderr END ====
[2026-04-13 22:05:08]  *** Error codes and diagnostics ***
[2026-04-13 22:05:08]     "exeErrorCode": 0,
[2026-04-13 22:05:08]     "pilotErrorCode": 0,
[2026-04-13 22:05:08]  *** Listing of results directory ***
[2026-04-13 22:05:08] total 417496
[2026-04-13 22:05:08] -rwx------. 1 boincer umatlas     36322 Apr 13 09:27 runpilot2-wrapper.sh
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 09:32 pilot3.tar.gz
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 09:32 queuedata.json
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas       100 Apr 13 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 22:05:08] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 16:28 run_atlas
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas       105 Apr 13 16:28 job.xml
[2026-04-13 22:05:08] -rw-r--r--. 2 boincer umatlas 225719394 Apr 13 16:28 EVNT.49263189._001482.pool.root.1
[2026-04-13 22:05:08] -rw-r--r--. 2 boincer umatlas    656921 Apr 13 16:28 input.tar.gz
[2026-04-13 22:05:08] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 16:28 start_atlas.sh
[2026-04-13 22:05:08] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 16:28 shared
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas         0 Apr 13 16:28 boinc_lockfile
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 16:28 pandaJob.out
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas        57 Apr 13 16:28 setup.sh.local
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas    997512 Apr 13 16:29 agis_schedconf.cvmfs.json
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas       444 Apr 13 16:30 workernode_map.json
[2026-04-13 22:05:08] drwx------. 5 boincer umatlas      4096 Apr 13 16:30 pilot3
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas      6777 Apr 13 22:01 init_data.xml
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas 194186241 Apr 13 22:02 HITS.49263191._057959.pool.root.1
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas       489 Apr 13 22:02 boinc_task_state.xml
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas      1058 Apr 13 22:04 memory_monitor_summary.json
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas   1511579 Apr 13 22:04 agis_ddmendpoints.agis.ALL.json
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas    416675 Apr 13 22:04 log.49263191._057959.job.log.tgz.1
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas      6429 Apr 13 22:04 heartbeat_new.json
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas      6320 Apr 13 22:04 heartbeat.json
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas        95 Apr 13 22:05 pilot_heartbeat.json
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas      4819 Apr 13 22:05 pilotlog.txt
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas        29 Apr 13 22:05 wrapper_checkpoint.txt
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas   1355700 Apr 13 22:05 log.49263191._057959.job.log.1
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas       357 Apr 13 22:05 output.list
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas       410 Apr 13 22:05 runtime_log
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas   1792000 Apr 13 22:05 result.tar.gz
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas      8974 Apr 13 22:05 runtime_log.err
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas       661 Apr 13 22:05 ef5a8c21be0a.diag
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 22:05 boinc_mmap_file
[2026-04-13 22:05:08] -rw-r--r--. 1 boincer umatlas     21311 Apr 13 22:05 stderr.txt
[2026-04-13 22:05:08] HITS file was successfully produced:
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas 194186241 Apr 13 22:02 shared/HITS.pool.root.1
[2026-04-13 22:05:08]  *** Contents of shared directory: ***
[2026-04-13 22:05:08] total 412488
[2026-04-13 22:05:08] -rw-r--r--. 2 boincer umatlas 225719394 Apr 13 16:28 ATLAS.root_0
[2026-04-13 22:05:08] -rw-r--r--. 2 boincer umatlas    656921 Apr 13 16:28 input.tar.gz
[2026-04-13 22:05:08] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 16:28 start_atlas.sh
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas 194186241 Apr 13 22:02 HITS.pool.root.1
[2026-04-13 22:05:08] -rw-------. 1 boincer umatlas   1792000 Apr 13 22:05 result.tar.gz
22:05:09 (315959): run_atlas exited; CPU time 115451.457761
22:05:09 (315959): called boinc_finish(0)

</stderr_txt>
]]>

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