Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:51:11 (2631492): wrapper (7.7.26015): starting
14:51:11 (2631492): wrapper: running run_atlas (--nthreads 10)
[2026-04-13 14:51:11] Arguments: --nthreads 10
[2026-04-13 14:51:11] Threads: 10
[2026-04-13 14:51:11] Checking for CVMFS
[2026-04-13 14:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 14:51:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 14:51:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 14:51:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 14:51:14] 2.13.3.0 6428 157257 233452 158426 3 77 34991066 39288832 6848 16776704 0 101925021 99.706 104309889 36812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-13 14:51:14] CVMFS is ok
[2026-04-13 14:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 14:51:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 14:51:14] Further information can be found at the LHC@home message board.
[2026-04-13 14:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 14:51:14] Checking for apptainer binary...
[2026-04-13 14:51:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 14:51:14] Running /usr/bin/apptainer --version
[2026-04-13 14:51:14] apptainer version 1.4.5-2.el9
[2026-04-13 14:51:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 14:51:15] c-211-3.aglt2.org
[2026-04-13 14:51:15] apptainer works
[2026-04-13 14:51:15] Set ATHENA_PROC_NUMBER=10
[2026-04-13 14:51:15] Set ATHENA_CORE_NUMBER=10
[2026-04-13 14:51:15] Starting ATLAS job with PandaID=7089543775
[2026-04-13 14:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 19:13:52]  *** The last 200 lines of the pilot log: ***
[2026-04-13 19:13:52] 2026-04-13 23:13:15,960 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-13 19:13:52] 2026-04-13 23:13:16,339 | INFO     | PID=2637014 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-13 19:13:52] 2026-04-13 23:13:16,340 | INFO     | .. there are 8 such processes running
[2026-04-13 19:13:52] 2026-04-13 23:13:17,554 | INFO     | job 7089543775 has state=finished
[2026-04-13 19:13:52] 2026-04-13 23:13:17,555 | INFO     | preparing for final server update for job 7089543775 in state='finished'
[2026-04-13 19:13:52] 2026-04-13 23:13:17,555 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7089543775/jobReport.json
[2026-04-13 19:13:52] 2026-04-13 23:13:17,557 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-13 19:13:52] 2026-04-13 23:13:17,557 | INFO     | this job has now completed (state=finished)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,557 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,558 | INFO     | log transfer has been attempted: DONE
[2026-04-13 19:13:52] 2026-04-13 23:13:17,558 | INFO     | job 7089543775 has finished - writing final server update
[2026-04-13 19:13:52] 2026-04-13 23:13:17,558 | INFO     | total number of processed events: 400 (read)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,565 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7089543775/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,566 | INFO     | extracted standard info from prmon json
[2026-04-13 19:13:52] 2026-04-13 23:13:17,566 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 19:13:52] 2026-04-13 23:13:17,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 19:13:52] 2026-04-13 23:13:17,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 19:13:52] 2026-04-13 23:13:17,571 | INFO     | fitting pss+swap vs Time
[2026-04-13 19:13:52] 2026-04-13 23:13:17,572 | INFO     | sum of square deviations: 5142081043.741209
[2026-04-13 19:13:52] 2026-04-13 23:13:17,574 | INFO     | sum of deviations: 136275234321.4823
[2026-04-13 19:13:52] 2026-04-13 23:13:17,574 | INFO     | mean x (centered): 0.0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,574 | INFO     | mean y: 2535182.6784313726
[2026-04-13 19:13:52] 2026-04-13 23:13:17,574 | INFO     | intersect: 2535182.6784313726
[2026-04-13 19:13:52] 2026-04-13 23:13:17,575 | INFO     | chi2: 3.9281131696439378
[2026-04-13 19:13:52] 2026-04-13 23:13:17,575 | INFO     | sum of square deviations: 4845472897.983977
[2026-04-13 19:13:52] 2026-04-13 23:13:17,577 | INFO     | sum of deviations: 151353876985.6559
[2026-04-13 19:13:52] 2026-04-13 23:13:17,577 | INFO     | mean x (centered): 0.0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,577 | INFO     | mean y: 2542792.328
[2026-04-13 19:13:52] 2026-04-13 23:13:17,578 | INFO     | intersect: 2542792.328
[2026-04-13 19:13:52] 2026-04-13 23:13:17,578 | INFO     | chi2: 3.133371919752053
[2026-04-13 19:13:52] 2026-04-13 23:13:17,578 | INFO     | current chi2=3.133371919752053 (change=20.232137302803924 %)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,578 | INFO     | right removable region: 249
[2026-04-13 19:13:52] 2026-04-13 23:13:17,579 | INFO     | sum of square deviations: 4845487299.936011
[2026-04-13 19:13:52] 2026-04-13 23:13:17,581 | INFO     | sum of deviations: 68978751372.4
[2026-04-13 19:13:52] 2026-04-13 23:13:17,581 | INFO     | mean x (centered): 0.0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,581 | INFO     | mean y: 2569673.9
[2026-04-13 19:13:52] 2026-04-13 23:13:17,581 | INFO     | intersect: 2569673.9
[2026-04-13 19:13:52] 2026-04-13 23:13:17,582 | INFO     | chi2: 1.398541971369694
[2026-04-13 19:13:52] 2026-04-13 23:13:17,583 | INFO     | current chi2=1.398541971369694 (change=64.39659676361961 %)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,583 | INFO     | sum of square deviations: 4560551815.167308
[2026-04-13 19:13:52] 2026-04-13 23:13:17,585 | INFO     | sum of deviations: 52153763735.80817
[2026-04-13 19:13:52] 2026-04-13 23:13:17,585 | INFO     | mean x (centered): 0.0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,585 | INFO     | mean y: 2578679.820408163
[2026-04-13 19:13:52] 2026-04-13 23:13:17,585 | INFO     | intersect: 2578679.820408163
[2026-04-13 19:13:52] 2026-04-13 23:13:17,586 | INFO     | chi2: 1.3012246537176653
[2026-04-13 19:13:52] 2026-04-13 23:13:17,586 | INFO     | current chi2=1.3012246537176653 (change=6.958483881375319 %)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,586 | INFO     | left removable region: 10
[2026-04-13 19:13:52] 2026-04-13 23:13:17,587 | INFO     | sum of square deviations: 4233589365.7489576
[2026-04-13 19:13:52] 2026-04-13 23:13:17,588 | INFO     | sum of deviations: 68034992607.58156
[2026-04-13 19:13:52] 2026-04-13 23:13:17,588 | INFO     | mean x (centered): 0.0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,588 | INFO     | mean y: 2587374.1631799163
[2026-04-13 19:13:52] 2026-04-13 23:13:17,588 | INFO     | intersect: 2587374.1631799163
[2026-04-13 19:13:52] 2026-04-13 23:13:17,589 | INFO     | chi2: 0.49190077594989035
[2026-04-13 19:13:52] 2026-04-13 23:13:17,589 | INFO     | current memory leak: 16.07 B/s (using 239 data points, chi2=0.49)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,589 | INFO     | could have reported an average CPU frequency of 2600 MHz (12 samples)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,590 | INFO     | ..............................
[2026-04-13 19:13:52] 2026-04-13 23:13:17,590 | INFO     | . Timing measurements:
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . get job = 0 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . initial setup = 43 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . payload setup = 55 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . stage-in = 0 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . payload execution = 15539 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . stage-out = 2 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | . log creation = 0 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,591 | INFO     | ..............................
[2026-04-13 19:13:52] 2026-04-13 23:13:17,695 | INFO     | 
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | job summary report
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | --------------------------------------------------
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | PanDA job id: 7089543775
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | task id: 49645815
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | errors: (none)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | pilot state: finished 
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | transexitcode: 0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | exeerrorcode: 0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,697 | INFO     | exeerrordiag: 
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | exitcode: 0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | exitmsg: OK
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | cpuconsumptiontime: 64418 s
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | nevents: 400
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | neventsw: 0
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | pid: 2643773
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | pgrp: 2643773
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | corecount: 10
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | event service: False
[2026-04-13 19:13:52] 2026-04-13 23:13:17,698 | INFO     | sizes: {0: 2279767, 1: 2281596, 2: 2281624, 15597: 2312976, 15598: 2312975, 15600: 2322213, 15602: 2322351}
[2026-04-13 19:13:52] 2026-04-13 23:13:17,699 | INFO     | --------------------------------------------------
[2026-04-13 19:13:52] 2026-04-13 23:13:17,699 | INFO     | 
[2026-04-13 19:13:52] 2026-04-13 23:13:17,699 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-13 19:13:52] 2026-04-13 23:13:17,728 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,728 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,728 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,731 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 19:13:52] 2026-04-13 23:13:17,731 | INFO     | job 7089543775 has completed (purged errors)
[2026-04-13 19:13:52] 2026-04-13 23:13:17,731 | INFO     | overall cleanup function is called
[2026-04-13 19:13:52] 2026-04-13 23:13:18,741 | INFO     | --- collectZombieJob: --- 10, [2643773]
[2026-04-13 19:13:52] 2026-04-13 23:13:18,741 | INFO     | zombie collector waiting for pid 2643773
[2026-04-13 19:13:52] 2026-04-13 23:13:18,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 19:13:52] 2026-04-13 23:13:18,741 | INFO     | collected zombie processes
[2026-04-13 19:13:52] 2026-04-13 23:13:18,742 | INFO     | will attempt to kill all subprocesses of pid=2643773
[2026-04-13 19:13:52] 2026-04-13 23:13:19,006 | INFO     | process IDs to be killed: [2643773] (in reverse order)
[2026-04-13 19:13:52] 2026-04-13 23:13:19,090 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 19:13:52] 2026-04-13 23:13:19,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 19:13:52] 2026-04-13 23:13:19,098 | INFO     | did not find any defunct processes belonging to 2643773
[2026-04-13 19:13:52] 2026-04-13 23:13:19,105 | INFO     | did not find any defunct processes belonging to 2643773
[2026-04-13 19:13:52] 2026-04-13 23:13:19,105 | INFO     | Ready for new job
[2026-04-13 19:13:52] 2026-04-13 23:13:19,107 | INFO     | **************************************
[2026-04-13 19:13:52] 2026-04-13 23:13:19,107 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 19:13:52] 2026-04-13 23:13:19,107 | INFO     | **************************************
[2026-04-13 19:13:52] 2026-04-13 23:13:19,107 | INFO     | 
[2026-04-13 19:13:52] 2026-04-13 23:13:19,109 | INFO     | architecture information:
[2026-04-13 19:13:52] 2026-04-13 23:13:19,109 | INFO     | executing command: cat /etc/os-release
[2026-04-13 19:13:52] 2026-04-13 23:13:19,134 | INFO     | cat /etc/os-release:
[2026-04-13 19:13:52] NAME="CentOS Linux"
[2026-04-13 19:13:52] VERSION="7 (Core)"
[2026-04-13 19:13:52] ID="centos"
[2026-04-13 19:13:52] ID_LIKE="rhel fedora"
[2026-04-13 19:13:52] VERSION_ID="7"
[2026-04-13 19:13:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 19:13:52] ANSI_COLOR="0;31"
[2026-04-13 19:13:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 19:13:52] HOME_URL="https://www.centos.org/"
[2026-04-13 19:13:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 19:13:52] 
[2026-04-13 19:13:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 19:13:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 19:13:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 19:13:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 19:13:52] 
[2026-04-13 19:13:52] 2026-04-13 23:13:19,134 | INFO     | **************************************
[2026-04-13 19:13:52] 2026-04-13 23:13:19,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-13 19:13:52] 2026-04-13 23:13:19,660 | INFO     | sufficient remaining disk space (52380565504 B)
[2026-04-13 19:13:52] 2026-04-13 23:13:19,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 19:13:52] 2026-04-13 23:13:19,660 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 19:13:52] 2026-04-13 23:13:19,661 | INFO     | update_server=False
[2026-04-13 19:13:52] 2026-04-13 23:13:19,661 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 19:13:52] 2026-04-13 23:13:19,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 19:13:52] 2026-04-13 23:13:19,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 19:13:52] 2026-04-13 23:13:19,662 | INFO     | aborting loop
[2026-04-13 19:13:52] 2026-04-13 23:13:19,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 19:13:52] 2026-04-13 23:13:19,760 | INFO     | all data control threads have been joined
[2026-04-13 19:13:52] 2026-04-13 23:13:20,667 | INFO     | [job] retrieve thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,668 | INFO     | [job] job monitor thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,672 | INFO     | [job] queue monitor thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,701 | INFO     | [data] copytool_in thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,718 | INFO     | [payload] validate_post thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,765 | INFO     | [data] control thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,835 | INFO     | [job] validate thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:20,845 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:21,075 | INFO     | [payload] failed_post thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:21,083 | INFO     | all payload control threads have been joined
[2026-04-13 19:13:52] 2026-04-13 23:13:21,278 | INFO     | all job control threads have been joined
[2026-04-13 19:13:52] 2026-04-13 23:13:21,667 | INFO     | [data] copytool_out thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:21,761 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:21,887 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:22,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 19:13:52] 2026-04-13 23:13:22,088 | INFO     | [payload] control thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:22,284 | INFO     | [job] control thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:26,063 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:30,620 | INFO     | job.realtimelogging is not enabled
[2026-04-13 19:13:52] 2026-04-13 23:13:31,626 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 19:13:52] 2026-04-13 23:13:40,054 | INFO     | [monitor] cgroup control has ended
[2026-04-13 19:13:52] 2026-04-13 23:13:40,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128195385152)>', '<ExcThread(monitor, started 140127837861632)>']
[2026-04-13 19:13:52] 2026-04-13 23:13:45,237 | INFO     | all workflow threads have been joined
[2026-04-13 19:13:52] 2026-04-13 23:13:45,237 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 19:13:52] 2026-04-13 23:13:45,237 | INFO     | traces error code: 0
[2026-04-13 19:13:52] 2026-04-13 23:13:45,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 19:13:52] 2026-04-13 23:13:51,047 | INFO     | PID=2637014 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 19:13:52] 2026-04-13 23:13:51,047 | INFO     | .. there are 8 such processes running
[2026-04-13 19:13:52] 2026-04-13 23:13:51,048 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 19:13:52] 2026-04-13 23:13:51,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 19:13:52] 2026-04-13 23:13:51,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 19:13:52] 2026-04-13 23:13:51,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 19:13:52] 2026-04-13 23:13:51,056 | INFO     | [monitor] control thread has ended
[2026-04-13 19:13:52] 2026-04-13 23:13:51,412 [wrapper] ==== pilot stdout END ====
[2026-04-13 19:13:52] 2026-04-13 23:13:51,460 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 19:13:52] 2026-04-13 23:13:51,517 [wrapper] pilotpid: 2637014
[2026-04-13 19:13:52] 2026-04-13 23:13:51,564 [wrapper] Pilot exit status: 0
[2026-04-13 19:13:52] 2026-04-13 23:13:51,672 [wrapper] pandaids: 7089543775
[2026-04-13 19:13:52] 2026-04-13 23:13:51,729 [wrapper] cleanup supervisor_pilot 3034203 2637015
[2026-04-13 19:13:52] 2026-04-13 23:13:51,766 [wrapper] Test setup, not cleaning
[2026-04-13 19:13:52] 2026-04-13 23:13:51,859 [wrapper] apfmon messages muted
[2026-04-13 19:13:52] 2026-04-13 23:13:51,897 [wrapper] ==== wrapper stdout END ====
[2026-04-13 19:13:52] 2026-04-13 23:13:51,947 [wrapper] ==== wrapper stderr END ====
[2026-04-13 19:13:52]  *** Error codes and diagnostics ***
[2026-04-13 19:13:52]     "exeErrorCode": 0,
[2026-04-13 19:13:52]     "pilotErrorCode": 0,
[2026-04-13 19:13:52]  *** Listing of results directory ***
[2026-04-13 19:13:52] total 421340
[2026-04-13 19:13:52] -rwx------. 1 boincer umatlas     36322 Apr 13 09:27 runpilot2-wrapper.sh
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 09:32 pilot3.tar.gz
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 09:32 queuedata.json
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas       100 Apr 13 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 19:13:52] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 14:51 run_atlas
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas       105 Apr 13 14:51 job.xml
[2026-04-13 19:13:52] -rw-r--r--. 2 boincer umatlas 223057356 Apr 13 14:51 EVNT.48629115._000614.pool.root.1
[2026-04-13 19:13:52] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 14:51 start_atlas.sh
[2026-04-13 19:13:52] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 14:51 shared
[2026-04-13 19:13:52] -rw-r--r--. 2 boincer umatlas    656944 Apr 13 14:51 input.tar.gz
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas         0 Apr 13 14:51 boinc_lockfile
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas      2629 Apr 13 14:51 pandaJob.out
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas        57 Apr 13 14:51 setup.sh.local
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas    997534 Apr 13 14:52 agis_schedconf.cvmfs.json
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas       433 Apr 13 14:53 workernode_map.json
[2026-04-13 19:13:52] drwx------. 5 boincer umatlas      4096 Apr 13 14:53 pilot3
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas      6575 Apr 13 19:09 init_data.xml
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas       489 Apr 13 19:12 boinc_task_state.xml
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas 200648918 Apr 13 19:12 HITS.49645815._015377.pool.root.1
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas        95 Apr 13 19:13 pilot_heartbeat.json
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas      1054 Apr 13 19:13 memory_monitor_summary.json
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas   1511579 Apr 13 19:13 agis_ddmendpoints.agis.ALL.json
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas    442515 Apr 13 19:13 log.49645815._015377.job.log.tgz.1
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas      6403 Apr 13 19:13 heartbeat_new.json
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas      6294 Apr 13 19:13 heartbeat.json
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 19:13 boinc_mmap_file
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas        28 Apr 13 19:13 wrapper_checkpoint.txt
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas       822 Apr 13 19:13 pilotlog.txt
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas   1400547 Apr 13 19:13 log.49645815._015377.job.log.1
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas       357 Apr 13 19:13 output.list
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas       410 Apr 13 19:13 runtime_log
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas   1863680 Apr 13 19:13 result.tar.gz
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas      8961 Apr 13 19:13 runtime_log.err
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas       655 Apr 13 19:13 ef42579a928c.diag
[2026-04-13 19:13:52] -rw-r--r--. 1 boincer umatlas     21266 Apr 13 19:13 stderr.txt
[2026-04-13 19:13:52] HITS file was successfully produced:
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas 200648918 Apr 13 19:12 shared/HITS.pool.root.1
[2026-04-13 19:13:52]  *** Contents of shared directory: ***
[2026-04-13 19:13:52] total 416264
[2026-04-13 19:13:52] -rw-r--r--. 2 boincer umatlas 223057356 Apr 13 14:51 ATLAS.root_0
[2026-04-13 19:13:52] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 14:51 start_atlas.sh
[2026-04-13 19:13:52] -rw-r--r--. 2 boincer umatlas    656944 Apr 13 14:51 input.tar.gz
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas 200648918 Apr 13 19:12 HITS.pool.root.1
[2026-04-13 19:13:52] -rw-------. 1 boincer umatlas   1863680 Apr 13 19:13 result.tar.gz
19:13:53 (2631492): run_atlas exited; CPU time 64766.219587
19:13:53 (2631492): called boinc_finish(0)

</stderr_txt>
]]>

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