Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:15 (28445): wrapper (7.7.26015): starting
02:09:15 (28445): wrapper: running run_atlas (--nthreads 8)
[2026-04-14 02:09:15] Arguments: --nthreads 8
[2026-04-14 02:09:15] Threads: 8
[2026-04-14 02:09:15] Checking for CVMFS
[2026-04-14 02:09:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 02:09:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 02:09:15] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 02:09:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 02:09:15] 2.11.2.0 8257 17910 84244 158433 1 118 19650543 25165824 94 130560 0 5674666 99.854 3246155 6714 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-14 02:09:15] CVMFS is ok
[2026-04-14 02:09:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 02:09:15] Checking for apptainer binary...
[2026-04-14 02:09:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 02:09:15] Running /usr/bin/apptainer --version
[2026-04-14 02:09:15] apptainer version 1.3.2-1.el7
[2026-04-14 02:09:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 02:09:17] cg-vwn409.simple-grid.lan
[2026-04-14 02:09:17] apptainer works
[2026-04-14 02:09:17] Set ATHENA_PROC_NUMBER=8
[2026-04-14 02:09:17] Set ATHENA_CORE_NUMBER=8
[2026-04-14 02:09:17] Starting ATLAS job with PandaID=7089522734
[2026-04-14 02:09:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 07:16:27]  *** The last 200 lines of the pilot log: ***
[2026-04-14 07:16:27] 2026-04-14 05:15:20,269 | INFO     | this job has now completed (state=finished)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,269 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,269 | INFO     | log transfer has been attempted: DONE
[2026-04-14 07:16:27] 2026-04-14 05:15:20,269 | INFO     | job 7089522734 has finished - writing final server update
[2026-04-14 07:16:27] 2026-04-14 05:15:20,269 | INFO     | total number of processed events: 400 (read)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,271 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7089522734/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,272 | INFO     | extracted standard info from prmon json
[2026-04-14 07:16:27] 2026-04-14 05:15:20,272 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 07:16:27] 2026-04-14 05:15:20,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 07:16:27] 2026-04-14 05:15:20,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 07:16:27] 2026-04-14 05:15:20,278 | INFO     | fitting pss+swap vs Time
[2026-04-14 07:16:27] 2026-04-14 05:15:20,279 | INFO     | sum of square deviations: 8372156975.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,285 | INFO     | sum of deviations: 27750421461.999992
[2026-04-14 07:16:27] 2026-04-14 05:15:20,285 | INFO     | mean x (centered): 0.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,285 | INFO     | mean y: 2488747.8333333335
[2026-04-14 07:16:27] 2026-04-14 05:15:20,285 | INFO     | intersect: 2488747.8333333335
[2026-04-14 07:16:27] 2026-04-14 05:15:20,286 | INFO     | chi2: 2.3191743396013624
[2026-04-14 07:16:27] 2026-04-14 05:15:20,286 | INFO     | sum of square deviations: 7960484140.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,289 | INFO     | sum of deviations: 47074046907.000015
[2026-04-14 07:16:27] 2026-04-14 05:15:20,290 | INFO     | mean x (centered): 0.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,290 | INFO     | mean y: 2495806.294915254
[2026-04-14 07:16:27] 2026-04-14 05:15:20,290 | INFO     | intersect: 2495806.294915254
[2026-04-14 07:16:27] 2026-04-14 05:15:20,290 | INFO     | chi2: 1.5464977201830048
[2026-04-14 07:16:27] 2026-04-14 05:15:20,290 | INFO     | current chi2=1.5464977201830048 (change=33.31688378162943 %)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,291 | INFO     | sum of square deviations: 7562532492.5
[2026-04-14 07:16:27] 2026-04-14 05:15:20,294 | INFO     | sum of deviations: 46235627526.99999
[2026-04-14 07:16:27] 2026-04-14 05:15:20,294 | INFO     | mean x (centered): 0.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,294 | INFO     | mean y: 2495485.2344827587
[2026-04-14 07:16:27] 2026-04-14 05:15:20,294 | INFO     | intersect: 2495485.2344827587
[2026-04-14 07:16:27] 2026-04-14 05:15:20,295 | INFO     | chi2: 1.5469083840328606
[2026-04-14 07:16:27] 2026-04-14 05:15:20,295 | INFO     | current chi2=1.5469083840328606 (change=-0.026554442628417115 %)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,295 | INFO     | right removable region: 289
[2026-04-14 07:16:27] 2026-04-14 05:15:20,295 | INFO     | sum of square deviations: 7960484140.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,298 | INFO     | sum of deviations: -18695853582.999996
[2026-04-14 07:16:27] 2026-04-14 05:15:20,298 | INFO     | mean x (centered): 0.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,298 | INFO     | mean y: 2505822.0983050847
[2026-04-14 07:16:27] 2026-04-14 05:15:20,298 | INFO     | intersect: 2505822.0983050847
[2026-04-14 07:16:27] 2026-04-14 05:15:20,299 | INFO     | chi2: 0.8485708641826388
[2026-04-14 07:16:27] 2026-04-14 05:15:20,299 | INFO     | current chi2=0.8485708641826388 (change=63.41064793220773 %)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,300 | INFO     | sum of square deviations: 7562532492.5
[2026-04-14 07:16:27] 2026-04-14 05:15:20,302 | INFO     | sum of deviations: -26822855828.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,303 | INFO     | mean x (centered): 0.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,303 | INFO     | mean y: 2508911.144827586
[2026-04-14 07:16:27] 2026-04-14 05:15:20,303 | INFO     | intersect: 2508911.144827586
[2026-04-14 07:16:27] 2026-04-14 05:15:20,303 | INFO     | chi2: 0.7957054448377741
[2026-04-14 07:16:27] 2026-04-14 05:15:20,303 | INFO     | current chi2=0.7957054448377741 (change=6.2299357161862785 %)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,304 | INFO     | left removable region: 10
[2026-04-14 07:16:27] 2026-04-14 05:15:20,304 | INFO     | sum of square deviations: 6734191380.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,310 | INFO     | sum of deviations: -7118442153.000001
[2026-04-14 07:16:27] 2026-04-14 05:15:20,310 | INFO     | mean x (centered): 0.0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,310 | INFO     | mean y: 2516622.5842293906
[2026-04-14 07:16:27] 2026-04-14 05:15:20,310 | INFO     | intersect: 2516622.5842293906
[2026-04-14 07:16:27] 2026-04-14 05:15:20,311 | INFO     | chi2: 0.008713990648921076
[2026-04-14 07:16:27] 2026-04-14 05:15:20,311 | INFO     | current memory leak: -1.06 B/s (using 279 data points, chi2=0.01)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | ..............................
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . Timing measurements:
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . get job = 0 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . initial setup = 7 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . payload setup = 18 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . stage-in = 0 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . payload execution = 18294 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . stage-out = 3 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,312 | INFO     | . log creation = 1 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,313 | INFO     | ..............................
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | 
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | job summary report
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | --------------------------------------------------
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | PanDA job id: 7089522734
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | task id: 49645815
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | errors: (none)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,440 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | pilot state: finished 
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | transexitcode: 0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | exeerrorcode: 0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | exeerrordiag: 
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | exitcode: 0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | exitmsg: OK
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | cpuconsumptiontime: 72334 s
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | nevents: 400
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | neventsw: 0
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | pid: 4363
[2026-04-14 07:16:27] 2026-04-14 05:15:20,441 | INFO     | pgrp: 4363
[2026-04-14 07:16:27] 2026-04-14 05:15:20,442 | INFO     | corecount: 8
[2026-04-14 07:16:27] 2026-04-14 05:15:20,442 | INFO     | event service: False
[2026-04-14 07:16:27] 2026-04-14 05:15:20,442 | INFO     | sizes: {0: 2279767, 1: 2281596, 12: 2281596, 18316: 2314038, 18317: 2314037, 18320: 2323091, 18323: 2323275, 18324: 2323469}
[2026-04-14 07:16:27] 2026-04-14 05:15:20,442 | INFO     | --------------------------------------------------
[2026-04-14 07:16:27] 2026-04-14 05:15:20,442 | INFO     | 
[2026-04-14 07:16:27] 2026-04-14 05:15:20,442 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-14 07:16:27] 2026-04-14 05:15:20,834 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,836 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 07:16:27] 2026-04-14 05:15:20,837 | INFO     | job 7089522734 has completed (purged errors)
[2026-04-14 07:16:27] 2026-04-14 05:15:20,837 | INFO     | overall cleanup function is called
[2026-04-14 07:16:27] 2026-04-14 05:15:21,845 | INFO     | --- collectZombieJob: --- 10, [4363]
[2026-04-14 07:16:27] 2026-04-14 05:15:21,845 | INFO     | zombie collector waiting for pid 4363
[2026-04-14 07:16:27] 2026-04-14 05:15:21,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 07:16:27] 2026-04-14 05:15:21,845 | INFO     | collected zombie processes
[2026-04-14 07:16:27] 2026-04-14 05:15:21,845 | INFO     | will attempt to kill all subprocesses of pid=4363
[2026-04-14 07:16:27] 2026-04-14 05:15:21,914 | INFO     | process IDs to be killed: [4363] (in reverse order)
[2026-04-14 07:16:27] 2026-04-14 05:15:21,959 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 07:16:27] 2026-04-14 05:15:21,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 07:16:27] 2026-04-14 05:15:21,961 | INFO     | did not find any defunct processes belonging to 4363
[2026-04-14 07:16:27] 2026-04-14 05:15:21,962 | INFO     | did not find any defunct processes belonging to 4363
[2026-04-14 07:16:27] 2026-04-14 05:15:21,963 | INFO     | Ready for new job
[2026-04-14 07:16:27] 2026-04-14 05:15:21,965 | INFO     | **************************************
[2026-04-14 07:16:27] 2026-04-14 05:15:21,965 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 07:16:27] 2026-04-14 05:15:21,965 | INFO     | **************************************
[2026-04-14 07:16:27] 2026-04-14 05:15:21,965 | INFO     | 
[2026-04-14 07:16:27] 2026-04-14 05:15:21,966 | INFO     | pilot is running in a VM
[2026-04-14 07:16:27] 2026-04-14 05:15:21,966 | INFO     | architecture information:
[2026-04-14 07:16:27] 2026-04-14 05:15:21,966 | INFO     | executing command: cat /etc/os-release
[2026-04-14 07:16:27] 2026-04-14 05:15:21,987 | INFO     | cat /etc/os-release:
[2026-04-14 07:16:27] NAME="CentOS Linux"
[2026-04-14 07:16:27] VERSION="7 (Core)"
[2026-04-14 07:16:27] ID="centos"
[2026-04-14 07:16:27] ID_LIKE="rhel fedora"
[2026-04-14 07:16:27] VERSION_ID="7"
[2026-04-14 07:16:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 07:16:27] ANSI_COLOR="0;31"
[2026-04-14 07:16:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 07:16:27] HOME_URL="https://www.centos.org/"
[2026-04-14 07:16:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 07:16:27] 
[2026-04-14 07:16:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 07:16:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 07:16:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 07:16:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 07:16:27] 
[2026-04-14 07:16:27] 2026-04-14 05:15:21,987 | INFO     | **************************************
[2026-04-14 07:16:27] 2026-04-14 05:15:22,490 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-14 07:16:27] 2026-04-14 05:15:22,665 | INFO     | sufficient remaining disk space (496613982208 B)
[2026-04-14 07:16:27] 2026-04-14 05:15:22,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 07:16:27] 2026-04-14 05:15:22,666 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 07:16:27] 2026-04-14 05:15:22,666 | INFO     | update_server=False
[2026-04-14 07:16:27] 2026-04-14 05:15:22,666 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 07:16:27] 2026-04-14 05:15:22,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 07:16:27] 2026-04-14 05:15:22,783 | INFO     | all data control threads have been joined
[2026-04-14 07:16:27] 2026-04-14 05:15:22,783 | INFO     | all job control threads have been joined
[2026-04-14 07:16:27] 2026-04-14 05:15:23,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 07:16:27] 2026-04-14 05:15:23,574 | INFO     | aborting loop
[2026-04-14 07:16:27] 2026-04-14 05:15:23,672 | INFO     | [job] retrieve thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:23,789 | INFO     | [data] control thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:23,789 | INFO     | [job] control thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:23,884 | INFO     | all payload control threads have been joined
[2026-04-14 07:16:27] 2026-04-14 05:15:24,151 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,157 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,204 | INFO     | [job] validate thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,271 | INFO     | [data] copytool_in thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,434 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,580 | INFO     | [job] job monitor thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,674 | INFO     | [data] copytool_out thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:24,890 | INFO     | [payload] control thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:25,001 | INFO     | [payload] validate_post thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:25,078 | INFO     | [payload] failed_post thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:25,168 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:25,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 07:16:27] 2026-04-14 05:15:25,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 07:16:27] 2026-04-14 05:15:26,460 | INFO     | [job] queue monitor thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:29,416 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 07:16:27] 2026-04-14 05:15:52,412 | INFO     | PID=32332 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-14 07:16:27] 2026-04-14 05:15:52,412 | INFO     | .. there are 2 such processes running
[2026-04-14 07:16:27] 2026-04-14 05:15:52,413 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 07:16:27] 2026-04-14 05:15:52,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 07:16:27] 2026-04-14 05:15:52,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 07:16:27] 2026-04-14 05:16:15,419 | INFO     | [monitor] cgroup control has ended
[2026-04-14 07:16:27] 2026-04-14 05:16:16,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118258276160)>', '<ExcThread(monitor, started 140117603776256)>']
[2026-04-14 07:16:27] 2026-04-14 05:16:16,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 07:16:27] 2026-04-14 05:16:16,555 | INFO     | [monitor] control thread has ended
[2026-04-14 07:16:27] 2026-04-14 05:16:21,151 | INFO     | all workflow threads have been joined
[2026-04-14 07:16:27] 2026-04-14 05:16:21,151 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 07:16:27] 2026-04-14 05:16:21,151 | INFO     | traces error code: 0
[2026-04-14 07:16:27] 2026-04-14 05:16:21,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 07:16:27] 2026-04-14 05:16:23,210 [wrapper] ==== pilot stdout END ====
[2026-04-14 07:16:27] 2026-04-14 05:16:23,299 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 07:16:27] 2026-04-14 05:16:23,370 [wrapper] pilotpid: 32332
[2026-04-14 07:16:27] 2026-04-14 05:16:23,453 [wrapper] Pilot exit status: 0
[2026-04-14 07:16:27] 2026-04-14 05:16:23,974 [wrapper] pandaids: 7089522734
[2026-04-14 07:16:27] 2026-04-14 05:16:24,989 [wrapper] cleanup supervisor_pilot 21738 32333
[2026-04-14 07:16:27] 2026-04-14 05:16:25,054 [wrapper] Test setup, not cleaning
[2026-04-14 07:16:27] 2026-04-14 05:16:25,144 [wrapper] apfmon messages muted
[2026-04-14 07:16:27] 2026-04-14 05:16:25,249 [wrapper] ==== wrapper stdout END ====
[2026-04-14 07:16:27] 2026-04-14 05:16:25,305 [wrapper] ==== wrapper stderr END ====
[2026-04-14 07:16:27]  *** Error codes and diagnostics ***
[2026-04-14 07:16:27]     "exeErrorCode": 0,
[2026-04-14 07:16:27]     "pilotErrorCode": 0,
[2026-04-14 07:16:27]  *** Listing of results directory ***
[2026-04-14 07:16:27] total 423352
[2026-04-14 07:16:27] -rwx------. 1 boinc boinc     36322 Apr 13 15:27 runpilot2-wrapper.sh
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc    644190 Apr 13 15:32 pilot3.tar.gz
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc      5094 Apr 13 15:32 queuedata.json
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc       100 Apr 14 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 07:16:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 02:09 run_atlas
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc       105 Apr 14 02:09 job.xml
[2026-04-14 07:16:27] -rw-r--r--. 2 boinc boinc 226537664 Apr 14 02:09 EVNT.48629115._000608.pool.root.1
[2026-04-14 07:16:27] -rw-r--r--. 2 boinc boinc     15665 Apr 14 02:09 start_atlas.sh
[2026-04-14 07:16:27] drwxrwx--x. 2 boinc boinc        68 Apr 14 02:09 shared
[2026-04-14 07:16:27] -rw-r--r--. 2 boinc boinc    656946 Apr 14 02:09 input.tar.gz
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc      6308 Apr 14 02:09 init_data.xml
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc         0 Apr 14 02:09 boinc_lockfile
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc      2629 Apr 14 02:09 pandaJob.out
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc    997504 Apr 14 02:09 agis_schedconf.cvmfs.json
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc       415 Apr 14 02:09 workernode_map.json
[2026-04-14 07:16:27] drwx------. 5 boinc boinc      4096 Apr 14 02:09 pilot3
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc 198719386 Apr 14 07:13 HITS.49645815._015221.pool.root.1
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc       488 Apr 14 07:14 boinc_task_state.xml
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc      1017 Apr 14 07:15 memory_monitor_summary.json
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc   1511579 Apr 14 07:15 agis_ddmendpoints.agis.ALL.json
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc    425795 Apr 14 07:15 log.49645815._015221.job.log.tgz.1
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc      6341 Apr 14 07:15 heartbeat_new.json
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc      6232 Apr 14 07:15 heartbeat.json
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc        95 Apr 14 07:15 pilot_heartbeat.json
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc        28 Apr 14 07:16 wrapper_checkpoint.txt
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc      8192 Apr 14 07:16 boinc_mmap_file
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc      4879 Apr 14 07:16 pilotlog.txt
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc   1675504 Apr 14 07:16 log.49645815._015221.job.log.1
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc       357 Apr 14 07:16 output.list
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc       410 Apr 14 07:16 runtime_log
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc   2119680 Apr 14 07:16 result.tar.gz
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc      8438 Apr 14 07:16 runtime_log.err
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc       656 Apr 14 07:16 ef39d01bcd01.diag
[2026-04-14 07:16:27] -rw-r--r--. 1 boinc boinc     20644 Apr 14 07:16 stderr.txt
[2026-04-14 07:16:27] HITS file was successfully produced:
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc 198719386 Apr 14 07:13 shared/HITS.pool.root.1
[2026-04-14 07:16:27]  *** Contents of shared directory: ***
[2026-04-14 07:16:27] total 418028
[2026-04-14 07:16:27] -rw-r--r--. 2 boinc boinc 226537664 Apr 14 02:09 ATLAS.root_0
[2026-04-14 07:16:27] -rw-r--r--. 2 boinc boinc     15665 Apr 14 02:09 start_atlas.sh
[2026-04-14 07:16:27] -rw-r--r--. 2 boinc boinc    656946 Apr 14 02:09 input.tar.gz
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc 198719386 Apr 14 07:13 HITS.pool.root.1
[2026-04-14 07:16:27] -rw-------. 1 boinc boinc   2119680 Apr 14 07:16 result.tar.gz
07:16:28 (28445): run_atlas exited; CPU time 72500.503901
07:16:28 (28445): called boinc_finish(0)

</stderr_txt>
]]>

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