Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:30:28 (4114392): wrapper (7.7.26015): starting
13:30:28 (4114392): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 13:30:28] Arguments: --nthreads 8
[2026-04-13 13:30:28] Threads: 8
[2026-04-13 13:30:28] Checking for CVMFS
[2026-04-13 13:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 13:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 13:30:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 13:30:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 13:30:33] 2.13.3.0 12442 18802 365584 158424 0 329 23960066 32934526 28133 16776704 0 29954608 99.410 49833011 14816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 13:30:33] CVMFS is ok
[2026-04-13 13:30:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 13:30:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 13:30:33] Further information can be found at the LHC@home message board.
[2026-04-13 13:30:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 13:30:33] Checking for apptainer binary...
[2026-04-13 13:30:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 13:30:33] Running /usr/bin/apptainer --version
[2026-04-13 13:30:33] apptainer version 1.4.5-3.el9
[2026-04-13 13:30:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 13:30:34] c6-12-25-4.aglt2.org
[2026-04-13 13:30:34] apptainer works
[2026-04-13 13:30:35] Set ATHENA_PROC_NUMBER=8
[2026-04-13 13:30:35] Set ATHENA_CORE_NUMBER=8
[2026-04-13 13:30:35] Starting ATLAS job with PandaID=7089545683
[2026-04-13 13:30:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 01:12:54]  *** The last 200 lines of the pilot log: ***
[2026-04-14 01:12:54] 2026-04-14 05:12:15,654 | INFO     | preparing for final server update for job 7089545683 in state='finished'
[2026-04-14 01:12:54] 2026-04-14 05:12:16,368 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-14 01:12:54] 2026-04-14 05:12:16,369 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7089545683/jobReport.json
[2026-04-14 01:12:54] 2026-04-14 05:12:16,444 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-04-14 01:12:54] 2026-04-14 05:12:16,445 | INFO     | this job has now completed (state=finished)
[2026-04-14 01:12:54] 2026-04-14 05:12:16,450 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 01:12:54] 2026-04-14 05:12:16,451 | INFO     | log transfer has been attempted: DONE
[2026-04-14 01:12:54] 2026-04-14 05:12:16,451 | INFO     | job 7089545683 has finished - writing final server update
[2026-04-14 01:12:54] 2026-04-14 05:12:16,452 | INFO     | total number of processed events: 400 (read)
[2026-04-14 01:12:54] 2026-04-14 05:12:16,681 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7089545683/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 01:12:54] 2026-04-14 05:12:16,682 | INFO     | extracted standard info from prmon json
[2026-04-14 01:12:54] 2026-04-14 05:12:16,683 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 01:12:54] 2026-04-14 05:12:16,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 01:12:54] 2026-04-14 05:12:16,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 01:12:54] 2026-04-14 05:12:16,814 | INFO     | fitting pss+swap vs Time
[2026-04-14 01:12:54] 2026-04-14 05:12:16,817 | INFO     | sum of square deviations: 100100383973.62686
[2026-04-14 01:12:54] 2026-04-14 05:12:16,871 | INFO     | sum of deviations: 410597495359.4285
[2026-04-14 01:12:54] 2026-04-14 05:12:16,872 | INFO     | mean x (centered): 0.0
[2026-04-14 01:12:54] 2026-04-14 05:12:16,872 | INFO     | mean y: 2475413.214285714
[2026-04-14 01:12:54] 2026-04-14 05:12:16,872 | INFO     | intersect: 2475413.214285714
[2026-04-14 01:12:54] 2026-04-14 05:12:16,878 | INFO     | chi2: 3.534487123825208
[2026-04-14 01:12:54] 2026-04-14 05:12:16,896 | INFO     | sum of square deviations: 97927707894.1175
[2026-04-14 01:12:54] 2026-04-14 05:12:17,035 | INFO     | monitor loop #1872: job 0:7089545683 is in state 'finished'
[2026-04-14 01:12:54] 2026-04-14 05:12:17,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-14 01:12:54] 2026-04-14 05:12:17,050 | INFO     | sum of deviations: 449237554458.2688
[2026-04-14 01:12:54] 2026-04-14 05:12:17,051 | INFO     | mean x (centered): 0.0
[2026-04-14 01:12:54] 2026-04-14 05:12:17,051 | INFO     | mean y: 2478107.4493392073
[2026-04-14 01:12:54] 2026-04-14 05:12:17,056 | INFO     | intersect: 2478107.4493392073
[2026-04-14 01:12:54] 2026-04-14 05:12:17,059 | INFO     | chi2: 2.840311114383118
[2026-04-14 01:12:54] 2026-04-14 05:12:17,059 | INFO     | current chi2=2.840311114383118 (change=19.64007747440359 %)
[2026-04-14 01:12:54] 2026-04-14 05:12:17,059 | INFO     | right removable region: 680
[2026-04-14 01:12:54] 2026-04-14 05:12:17,066 | INFO     | sum of square deviations: 97927131930.14214
[2026-04-14 01:12:54] 2026-04-14 05:12:17,195 | INFO     | sum of deviations: 234715395965.04254
[2026-04-14 01:12:54] 2026-04-14 05:12:17,196 | INFO     | mean x (centered): 0.0
[2026-04-14 01:12:54] 2026-04-14 05:12:17,196 | INFO     | mean y: 2487740.593245228
[2026-04-14 01:12:54] 2026-04-14 05:12:17,196 | INFO     | intersect: 2487740.593245228
[2026-04-14 01:12:54] 2026-04-14 05:12:17,208 | INFO     | chi2: 1.0192424686557244
[2026-04-14 01:12:54] 2026-04-14 05:12:17,209 | INFO     | current chi2=1.0192424686557244 (change=71.16293162350958 %)
[2026-04-14 01:12:54] 2026-04-14 05:12:17,233 | INFO     | sum of square deviations: 95785554898.99852
[2026-04-14 01:12:54] 2026-04-14 05:12:17,279 | INFO     | sum of deviations: 194644734473.71423
[2026-04-14 01:12:54] 2026-04-14 05:12:17,279 | INFO     | mean x (centered): 0.0
[2026-04-14 01:12:54] 2026-04-14 05:12:17,280 | INFO     | mean y: 2490593.7144970414
[2026-04-14 01:12:54] 2026-04-14 05:12:17,280 | INFO     | intersect: 2490593.7144970414
[2026-04-14 01:12:54] 2026-04-14 05:12:17,283 | INFO     | chi2: 0.9225042161559807
[2026-04-14 01:12:54] 2026-04-14 05:12:17,283 | INFO     | current chi2=0.9225042161559807 (change=9.491191298899814 %)
[2026-04-14 01:12:54] 2026-04-14 05:12:17,283 | INFO     | left removable region: 10
[2026-04-14 01:12:54] 2026-04-14 05:12:17,286 | INFO     | sum of square deviations: 93257846128.92673
[2026-04-14 01:12:54] 2026-04-14 05:12:17,345 | INFO     | sum of deviations: 233740858671.81912
[2026-04-14 01:12:54] 2026-04-14 05:12:17,345 | INFO     | mean x (centered): 0.0
[2026-04-14 01:12:54] 2026-04-14 05:12:17,346 | INFO     | mean y: 2493401.1686567166
[2026-04-14 01:12:54] 2026-04-14 05:12:17,346 | INFO     | intersect: 2493401.1686567166
[2026-04-14 01:12:54] 2026-04-14 05:12:17,359 | INFO     | chi2: 0.220551279683439
[2026-04-14 01:12:54] 2026-04-14 05:12:17,360 | INFO     | current memory leak: 2.51 B/s (using 670 data points, chi2=0.22)
[2026-04-14 01:12:54] 2026-04-14 05:12:17,364 | INFO     | could have reported an average CPU frequency of 1000 MHz (27 samples)
[2026-04-14 01:12:54] 2026-04-14 05:12:17,365 | INFO     | ..............................
[2026-04-14 01:12:54] 2026-04-14 05:12:17,365 | INFO     | . Timing measurements:
[2026-04-14 01:12:54] 2026-04-14 05:12:17,365 | INFO     | . get job = 0 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,365 | INFO     | . initial setup = 33 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,365 | INFO     | . payload setup = 90 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,400 | INFO     | . stage-in = 0 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,400 | INFO     | . payload execution = 41867 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,401 | INFO     | . stage-out = 9 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,401 | INFO     | . log creation = 1 s
[2026-04-14 01:12:54] 2026-04-14 05:12:17,401 | INFO     | ..............................
[2026-04-14 01:12:54] 2026-04-14 05:12:18,932 | INFO     | 
[2026-04-14 01:12:54] 2026-04-14 05:12:18,933 | INFO     | job summary report
[2026-04-14 01:12:54] 2026-04-14 05:12:18,933 | INFO     | --------------------------------------------------
[2026-04-14 01:12:54] 2026-04-14 05:12:18,933 | INFO     | PanDA job id: 7089545683
[2026-04-14 01:12:54] 2026-04-14 05:12:18,933 | INFO     | task id: 49263200
[2026-04-14 01:12:54] 2026-04-14 05:12:18,934 | INFO     | errors: (none)
[2026-04-14 01:12:54] 2026-04-14 05:12:18,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 01:12:54] 2026-04-14 05:12:18,934 | INFO     | pilot state: finished 
[2026-04-14 01:12:54] 2026-04-14 05:12:18,934 | INFO     | transexitcode: 0
[2026-04-14 01:12:54] 2026-04-14 05:12:18,934 | INFO     | exeerrorcode: 0
[2026-04-14 01:12:54] 2026-04-14 05:12:18,935 | INFO     | exeerrordiag: 
[2026-04-14 01:12:54] 2026-04-14 05:12:18,935 | INFO     | exitcode: 0
[2026-04-14 01:12:54] 2026-04-14 05:12:18,935 | INFO     | exitmsg: OK
[2026-04-14 01:12:54] 2026-04-14 05:12:18,935 | INFO     | cpuconsumptiontime: 112055 s
[2026-04-14 01:12:54] 2026-04-14 05:12:18,935 | INFO     | nevents: 400
[2026-04-14 01:12:54] 2026-04-14 05:12:18,936 | INFO     | neventsw: 0
[2026-04-14 01:12:54] 2026-04-14 05:12:18,936 | INFO     | pid: 4137978
[2026-04-14 01:12:54] 2026-04-14 05:12:18,936 | INFO     | pgrp: 4137978
[2026-04-14 01:12:54] 2026-04-14 05:12:18,936 | INFO     | corecount: 8
[2026-04-14 01:12:54] 2026-04-14 05:12:18,936 | INFO     | event service: False
[2026-04-14 01:12:54] 2026-04-14 05:12:18,937 | INFO     | sizes: {0: 2279663, 1: 2279719, 2: 2279747, 3: 2279775, 5: 2281632, 6: 2281660, 17: 2281816, 41962: 2323992, 41963: 2323991, 41974: 2333045, 41978: 2333101, 41983:
[2026-04-14 01:12:54] 2026-04-14 05:12:18,937 | INFO     | --------------------------------------------------
[2026-04-14 01:12:54] 2026-04-14 05:12:18,937 | INFO     | 
[2026-04-14 01:12:54] 2026-04-14 05:12:18,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-14 01:12:54] 2026-04-14 05:12:19,025 | INFO     | PID=4123594 has CPU usage=29.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-14 01:12:54] 2026-04-14 05:12:19,026 | INFO     | .. there are 30 such processes running
[2026-04-14 01:12:54] 2026-04-14 05:12:19,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,031 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,031 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 01:12:54] 2026-04-14 05:12:19,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,035 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 01:12:54] 2026-04-14 05:12:19,035 | INFO     | job 7089545683 has completed (purged errors)
[2026-04-14 01:12:54] 2026-04-14 05:12:19,035 | INFO     | overall cleanup function is called
[2026-04-14 01:12:54] 2026-04-14 05:12:20,060 | INFO     | --- collectZombieJob: --- 10, [4137978]
[2026-04-14 01:12:54] 2026-04-14 05:12:20,060 | INFO     | zombie collector waiting for pid 4137978
[2026-04-14 01:12:54] 2026-04-14 05:12:20,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 01:12:54] 2026-04-14 05:12:20,061 | INFO     | collected zombie processes
[2026-04-14 01:12:54] 2026-04-14 05:12:20,061 | INFO     | will attempt to kill all subprocesses of pid=4137978
[2026-04-14 01:12:54] 2026-04-14 05:12:23,345 | INFO     | process IDs to be killed: [4137978] (in reverse order)
[2026-04-14 01:12:54] 2026-04-14 05:12:24,285 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 01:12:54] 2026-04-14 05:12:24,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 01:12:54] 2026-04-14 05:12:24,447 | INFO     | did not find any defunct processes belonging to 4137978
[2026-04-14 01:12:54] 2026-04-14 05:12:24,490 | INFO     | did not find any defunct processes belonging to 4137978
[2026-04-14 01:12:54] 2026-04-14 05:12:24,491 | INFO     | Ready for new job
[2026-04-14 01:12:54] 2026-04-14 05:12:24,496 | INFO     | **************************************
[2026-04-14 01:12:54] 2026-04-14 05:12:24,497 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 01:12:54] 2026-04-14 05:12:24,497 | INFO     | **************************************
[2026-04-14 01:12:54] 2026-04-14 05:12:24,497 | INFO     | 
[2026-04-14 01:12:54] 2026-04-14 05:12:24,515 | INFO     | architecture information:
[2026-04-14 01:12:54] 2026-04-14 05:12:24,520 | INFO     | executing command: cat /etc/os-release
[2026-04-14 01:12:54] 2026-04-14 05:12:24,563 | INFO     | cat /etc/os-release:
[2026-04-14 01:12:54] NAME="CentOS Linux"
[2026-04-14 01:12:54] VERSION="7 (Core)"
[2026-04-14 01:12:54] ID="centos"
[2026-04-14 01:12:54] ID_LIKE="rhel fedora"
[2026-04-14 01:12:54] VERSION_ID="7"
[2026-04-14 01:12:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 01:12:54] ANSI_COLOR="0;31"
[2026-04-14 01:12:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 01:12:54] HOME_URL="https://www.centos.org/"
[2026-04-14 01:12:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 01:12:54] 
[2026-04-14 01:12:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 01:12:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 01:12:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 01:12:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 01:12:54] 
[2026-04-14 01:12:54] 2026-04-14 05:12:24,564 | INFO     | **************************************
[2026-04-14 01:12:54] 2026-04-14 05:12:25,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-14 01:12:54] 2026-04-14 05:12:25,271 | INFO     | sufficient remaining disk space (93624205312 B)
[2026-04-14 01:12:54] 2026-04-14 05:12:25,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 01:12:54] 2026-04-14 05:12:25,272 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 01:12:54] 2026-04-14 05:12:25,272 | INFO     | update_server=False
[2026-04-14 01:12:54] 2026-04-14 05:12:25,272 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 01:12:54] 2026-04-14 05:12:25,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 01:12:54] 2026-04-14 05:12:25,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 01:12:54] 2026-04-14 05:12:25,699 | INFO     | aborting loop
[2026-04-14 01:12:54] 2026-04-14 05:12:26,279 | INFO     | [job] retrieve thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,327 | INFO     | all data control threads have been joined
[2026-04-14 01:12:54] 2026-04-14 05:12:26,365 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,373 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,379 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,464 | INFO     | all job control threads have been joined
[2026-04-14 01:12:54] 2026-04-14 05:12:26,588 | INFO     | all payload control threads have been joined
[2026-04-14 01:12:54] 2026-04-14 05:12:26,608 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,682 | INFO     | [payload] failed_post thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,708 | INFO     | [job] job monitor thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:26,864 | INFO     | [payload] validate_post thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:27,296 | INFO     | [data] copytool_out thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:27,333 | INFO     | [data] control thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:27,409 | INFO     | [job] validate thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:27,478 | INFO     | [job] control thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:27,594 | INFO     | [payload] control thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:27,736 | INFO     | [data] copytool_in thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:28,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 01:12:54] 2026-04-14 05:12:28,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 01:12:54] 2026-04-14 05:12:29,077 | INFO     | [job] queue monitor thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:32,491 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 01:12:54] 2026-04-14 05:12:32,856 | INFO     | [monitor] cgroup control has ended
[2026-04-14 01:12:54] 2026-04-14 05:12:34,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620595029824)>', '<ExcThread(monitor, started 140620198811392)>']
[2026-04-14 01:12:54] 2026-04-14 05:12:39,118 | INFO     | all workflow threads have been joined
[2026-04-14 01:12:54] 2026-04-14 05:12:39,118 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 01:12:54] 2026-04-14 05:12:39,119 | INFO     | traces error code: 0
[2026-04-14 01:12:54] 2026-04-14 05:12:39,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 01:12:54] 2026-04-14 05:12:52,620 | INFO     | PID=4123594 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 01:12:54] 2026-04-14 05:12:52,631 | INFO     | .. there are 30 such processes running
[2026-04-14 01:12:54] 2026-04-14 05:12:52,632 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 01:12:54] 2026-04-14 05:12:52,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 01:12:54] 2026-04-14 05:12:52,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 01:12:54] 2026-04-14 05:12:52,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 01:12:54] 2026-04-14 05:12:52,633 | INFO     | [monitor] control thread has ended
[2026-04-14 01:12:54] 2026-04-14 05:12:53,051 [wrapper] ==== pilot stdout END ====
[2026-04-14 01:12:54] 2026-04-14 05:12:53,056 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 01:12:54] 2026-04-14 05:12:53,061 [wrapper] pilotpid: 4123594
[2026-04-14 01:12:54] 2026-04-14 05:12:53,075 [wrapper] Pilot exit status: 0
[2026-04-14 01:12:54] 2026-04-14 05:12:53,182 [wrapper] pandaids: 7089545683
[2026-04-14 01:12:54] 2026-04-14 05:12:53,564 [wrapper] cleanup supervisor_pilot 1516837 4123595
[2026-04-14 01:12:54] 2026-04-14 05:12:53,678 [wrapper] Test setup, not cleaning
[2026-04-14 01:12:54] 2026-04-14 05:12:53,696 [wrapper] apfmon messages muted
[2026-04-14 01:12:54] 2026-04-14 05:12:53,703 [wrapper] ==== wrapper stdout END ====
[2026-04-14 01:12:54] 2026-04-14 05:12:53,708 [wrapper] ==== wrapper stderr END ====
[2026-04-14 01:12:54]  *** Error codes and diagnostics ***
[2026-04-14 01:12:54]     "exeErrorCode": 0,
[2026-04-14 01:12:54]     "pilotErrorCode": 0,
[2026-04-14 01:12:54]  *** Listing of results directory ***
[2026-04-14 01:12:54] total 416704
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 09:10 pilot3.tar.gz
[2026-04-14 01:12:54] -rwx------. 1 boincer umatlas     36322 Apr 13 09:27 runpilot2-wrapper.sh
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 09:32 queuedata.json
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas       100 Apr 13 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 01:12:54] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 13:30 run_atlas
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas       105 Apr 13 13:30 job.xml
[2026-04-14 01:12:54] -rw-r--r--. 2 boincer umatlas 222398712 Apr 13 13:30 EVNT.49263198._001816.pool.root.1
[2026-04-14 01:12:54] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 13:30 start_atlas.sh
[2026-04-14 01:12:54] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 13:30 shared
[2026-04-14 01:12:54] -rw-r--r--. 2 boincer umatlas    656932 Apr 13 13:30 input.tar.gz
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas         0 Apr 13 13:30 boinc_lockfile
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas      2576 Apr 13 13:30 pandaJob.out
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas        57 Apr 13 13:30 setup.sh.local
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas    997526 Apr 13 13:31 agis_schedconf.cvmfs.json
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas       444 Apr 13 13:32 workernode_map.json
[2026-04-14 01:12:54] drwx------. 5 boincer umatlas      4096 Apr 13 13:32 pilot3
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas 193603696 Apr 14 01:10 HITS.49263200._063783.pool.root.1
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas       489 Apr 14 01:10 boinc_task_state.xml
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas      6777 Apr 14 01:11 init_data.xml
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas      1055 Apr 14 01:11 memory_monitor_summary.json
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas        95 Apr 14 01:11 pilot_heartbeat.json
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas   1511579 Apr 14 01:12 agis_ddmendpoints.agis.ALL.json
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas    582389 Apr 14 01:12 log.49263200._063783.job.log.tgz.1
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas      6423 Apr 14 01:12 heartbeat_new.json
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas      6314 Apr 14 01:12 heartbeat.json
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas        29 Apr 14 01:12 wrapper_checkpoint.txt
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas      8192 Apr 14 01:12 boinc_mmap_file
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas       823 Apr 14 01:12 pilotlog.txt
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas   2740116 Apr 14 01:12 log.49263200._063783.job.log.1
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas       357 Apr 14 01:12 output.list
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas       410 Apr 14 01:12 runtime_log
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas   3338240 Apr 14 01:12 result.tar.gz
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas      8974 Apr 14 01:12 runtime_log.err
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas       661 Apr 14 01:12 ef31a3e9c9ff.diag
[2026-04-14 01:12:54] -rw-r--r--. 1 boincer umatlas     21413 Apr 14 01:12 stderr.txt
[2026-04-14 01:12:54] HITS file was successfully produced:
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas 193603696 Apr 14 01:10 shared/HITS.pool.root.1
[2026-04-14 01:12:54]  *** Contents of shared directory: ***
[2026-04-14 01:12:54] total 410184
[2026-04-14 01:12:54] -rw-r--r--. 2 boincer umatlas 222398712 Apr 13 13:30 ATLAS.root_0
[2026-04-14 01:12:54] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 13:30 start_atlas.sh
[2026-04-14 01:12:54] -rw-r--r--. 2 boincer umatlas    656932 Apr 13 13:30 input.tar.gz
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas 193603696 Apr 14 01:10 HITS.pool.root.1
[2026-04-14 01:12:54] -rw-------. 1 boincer umatlas   3338240 Apr 14 01:12 result.tar.gz
01:12:55 (4114392): run_atlas exited; CPU time 116781.758260
01:12:55 (4114392): called boinc_finish(0)

</stderr_txt>
]]>

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