Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:05:13 (2910012): wrapper (7.7.26015): starting
05:05:13 (2910012): wrapper: running run_atlas (--nthreads 3)
[2026-04-14 05:05:13] Arguments: --nthreads 3
[2026-04-14 05:05:13] Threads: 3
[2026-04-14 05:05:13] Checking for CVMFS
[2026-04-14 05:05:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 05:05:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 05:05:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 05:05:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 05:05:13] 2.9.2.0 2104384 5114 84816 158437 2 50 25651209 36864000 0 130560 0 3078804 99.989 191096 13289 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-14 05:05:13] CVMFS is ok
[2026-04-14 05:05:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 05:05:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 05:05:13] Further information can be found at the LHC@home message board.
[2026-04-14 05:05:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 05:05:13] Checking for apptainer binary...
[2026-04-14 05:05:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 05:05:13] Running /usr/bin/apptainer --version
[2026-04-14 05:05:13] apptainer version 1.4.1-1.1
[2026-04-14 05:05:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 05:05:13] thA385
[2026-04-14 05:05:13] apptainer works
[2026-04-14 05:05:13] Set ATHENA_PROC_NUMBER=3
[2026-04-14 05:05:13] Set ATHENA_CORE_NUMBER=3
[2026-04-14 05:05:13] Starting ATLAS job with PandaID=7089539132
[2026-04-14 05:05:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 06:32:37]  *** The last 200 lines of the pilot log: ***
[2026-04-14 06:32:37] 2026-04-14 04:31:49,768 | INFO     | [data] control thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:49,822 | INFO     | all job control threads have been joined
[2026-04-14 06:32:37] 2026-04-14 04:31:49,924 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:50,025 | INFO     | [job] validate thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:50,216 | INFO     | [data] copytool_out thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:50,222 | INFO     | [payload] validate_post thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:50,438 | INFO     | [payload] failed_post thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:50,466 | INFO     | [data] copytool_in thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:50,828 | INFO     | [job] control thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:52,216 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:31:59,070 | INFO     | job.realtimelogging is not enabled
[2026-04-14 06:32:37] 2026-04-14 04:32:00,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 06:32:37] 2026-04-14 04:32:17,871 | INFO     | PID=2914060 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 06:32:37] 2026-04-14 04:32:17,872 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 06:32:37] 2026-04-14 04:32:17,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 06:32:37] 2026-04-14 04:32:17,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 06:32:37] 2026-04-14 04:32:30,850 | INFO     | [monitor] cgroup control has ended
[2026-04-14 06:32:37] 2026-04-14 04:32:32,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824274532160)>', '<ExcThread(monitor, started 139823750813440)>']
[2026-04-14 06:32:37] 2026-04-14 04:32:32,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 06:32:37] 2026-04-14 04:32:32,952 | INFO     | [monitor] control thread has ended
[2026-04-14 06:32:37] 2026-04-14 04:32:37,566 | INFO     | all workflow threads have been joined
[2026-04-14 06:32:37] 2026-04-14 04:32:37,566 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 06:32:37] 2026-04-14 04:32:37,567 | INFO     | traces error code: 0
[2026-04-14 06:32:37] 2026-04-14 04:32:37,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 06:32:37] 2026-04-14 04:32:37,617 [wrapper] ==== pilot stdout END ====
[2026-04-14 06:32:37] 2026-04-14 04:32:37,619 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 06:32:37] 2026-04-14 04:32:37,622 [wrapper] pilotpid: 2914060
[2026-04-14 06:32:37] 2026-04-14 04:32:37,624 [wrapper] Pilot exit status: 0
[2026-04-14 06:32:37] 2026-04-14 04:32:37,631 [wrapper] pandaids: 7089539132
[2026-04-14 06:32:37] 2026-04-14 04:32:37,650 [wrapper] cleanup supervisor_pilot 2923851 2914061
[2026-04-14 06:32:37] 2026-04-14 04:32:37,652 [wrapper] Test setup, not cleaning
[2026-04-14 06:32:37] 2026-04-14 04:32:37,655 [wrapper] apfmon messages muted
[2026-04-14 06:32:37] 2026-04-14 04:32:37,658 [wrapper] ==== wrapper stdout END ====
[2026-04-14 06:32:37] 2026-04-14 04:32:37,660 [wrapper] ==== wrapper stderr END ====
[2026-04-14 06:32:37]  *** Error codes and diagnostics ***
[2026-04-14 06:32:37]     "exeErrorCode": 0,
[2026-04-14 06:32:37]     "pilotErrorCode": 0,
[2026-04-14 06:32:37]  *** Listing of results directory ***
[2026-04-14 06:32:37] total 420192
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc    644190 Apr 13 15:10 pilot3.tar.gz
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc      5094 Apr 13 15:25 queuedata.json
[2026-04-14 06:32:37] -rwx------ 1 boinc boinc     36322 Apr 13 15:26 runpilot2-wrapper.sh
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc       100 Apr 14 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 06:32:37] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 05:05 run_atlas
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc       105 Apr 14 05:05 job.xml
[2026-04-14 06:32:37] -rw-r--r-- 2 boinc boinc 221503016 Apr 14 05:05 EVNT.49263189._000942.pool.root.1
[2026-04-14 06:32:37] -rw-r--r-- 2 boinc boinc    656930 Apr 14 05:05 input.tar.gz
[2026-04-14 06:32:37] -rw-r--r-- 2 boinc boinc     15665 Apr 14 05:05 start_atlas.sh
[2026-04-14 06:32:37] drwxrwx--x 2 boinc boinc      4096 Apr 14 05:05 shared
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc         0 Apr 14 05:05 boinc_setup_complete
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc      6361 Apr 14 05:05 init_data.xml
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc         0 Apr 14 05:05 boinc_lockfile
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc      2577 Apr 14 05:05 pandaJob.out
[2026-04-14 06:32:37] -rw------- 1 boinc boinc    997512 Apr 14 05:05 agis_schedconf.cvmfs.json
[2026-04-14 06:32:37] -rw------- 1 boinc boinc   1511579 Apr 14 05:05 agis_ddmendpoints.agis.ALL.json
[2026-04-14 06:32:37] -rw------- 1 boinc boinc       423 Apr 14 05:05 workernode_map.json
[2026-04-14 06:32:37] drwx------ 5 boinc boinc      4096 Apr 14 05:05 pilot3
[2026-04-14 06:32:37] -rw------- 1 boinc boinc 203263721 Apr 14 06:31 HITS.49263191._071331.pool.root.1
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc       487 Apr 14 06:31 boinc_task_state.xml
[2026-04-14 06:32:37] -rw------- 1 boinc boinc      1017 Apr 14 06:31 memory_monitor_summary.json
[2026-04-14 06:32:37] -rw------- 1 boinc boinc    229704 Apr 14 06:31 log.49263191._071331.job.log.tgz.1
[2026-04-14 06:32:37] -rw------- 1 boinc boinc      6315 Apr 14 06:31 heartbeat_new.json
[2026-04-14 06:32:37] -rw------- 1 boinc boinc      6206 Apr 14 06:31 heartbeat.json
[2026-04-14 06:32:37] -rw------- 1 boinc boinc        95 Apr 14 06:32 pilot_heartbeat.json
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc        27 Apr 14 06:32 wrapper_checkpoint.txt
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc      8192 Apr 14 06:32 boinc_mmap_file
[2026-04-14 06:32:37] -rw------- 1 boinc boinc      4819 Apr 14 06:32 pilotlog.txt
[2026-04-14 06:32:37] -rw------- 1 boinc boinc    504267 Apr 14 06:32 log.49263191._071331.job.log.1
[2026-04-14 06:32:37] -rw------- 1 boinc boinc       357 Apr 14 06:32 output.list
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc       410 Apr 14 06:32 runtime_log
[2026-04-14 06:32:37] -rw------- 1 boinc boinc    747520 Apr 14 06:32 result.tar.gz
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc      8518 Apr 14 06:32 runtime_log.err
[2026-04-14 06:32:37] -rw------- 1 boinc boinc       657 Apr 14 06:32 eef145167d86.diag
[2026-04-14 06:32:37] -rw-r--r-- 1 boinc boinc      5802 Apr 14 06:32 stderr.txt
[2026-04-14 06:32:37] HITS file was successfully produced:
[2026-04-14 06:32:37] -rw------- 1 boinc boinc 203263721 Apr 14 06:31 shared/HITS.pool.root.1
[2026-04-14 06:32:37]  *** Contents of shared directory: ***
[2026-04-14 06:32:37] total 416212
[2026-04-14 06:32:37] -rw-r--r-- 2 boinc boinc 221503016 Apr 14 05:05 ATLAS.root_0
[2026-04-14 06:32:37] -rw-r--r-- 2 boinc boinc    656930 Apr 14 05:05 input.tar.gz
[2026-04-14 06:32:37] -rw-r--r-- 2 boinc boinc     15665 Apr 14 05:05 start_atlas.sh
[2026-04-14 06:32:37] -rw------- 1 boinc boinc 203263721 Apr 14 06:31 HITS.pool.root.1
[2026-04-14 06:32:37] -rw------- 1 boinc boinc    747520 Apr 14 06:32 result.tar.gz
06:32:39 (2910012): run_atlas exited; CPU time 14596.994785
06:32:39 (2910012): called boinc_finish(0)

</stderr_txt>
]]>

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