Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:07:21 (14782): wrapper (7.7.26015): starting
09:07:21 (14782): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 09:07:21] Arguments: --nthreads 8
[2026-04-13 09:07:21] Threads: 8
[2026-04-13 09:07:21] Checking for CVMFS
[2026-04-13 09:07:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 09:07:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 09:07:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 09:07:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 09:07:21] 2.11.2.0 2990 11768 75904 158416 2 52 14932586 20275201 1 130560 0 3158835 99.828 709807 36591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-13 09:07:21] CVMFS is ok
[2026-04-13 09:07:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 09:07:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 09:07:21] Further information can be found at the LHC@home message board.
[2026-04-13 09:07:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 09:07:21] Checking for apptainer binary...
[2026-04-13 09:07:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 09:07:21] Running /usr/bin/apptainer --version
[2026-04-13 09:07:22] apptainer version 1.3.2-1.el7
[2026-04-13 09:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 09:07:23] c-204-23.aglt2.org
[2026-04-13 09:07:23] apptainer works
[2026-04-13 09:07:23] Set ATHENA_PROC_NUMBER=8
[2026-04-13 09:07:23] Set ATHENA_CORE_NUMBER=8
[2026-04-13 09:07:23] Starting ATLAS job with PandaID=7089337478
[2026-04-13 09:07:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 11:05:23]  *** The last 200 lines of the pilot log: ***
[2026-04-13 11:05:23] 2026-04-13 15:04:51,140 | INFO     | sum of deviations: 7873148854.000001
[2026-04-13 11:05:23] 2026-04-13 15:04:51,140 | INFO     | mean x (centered): 0.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,140 | INFO     | mean y: 2457834.9739130433
[2026-04-13 11:05:23] 2026-04-13 15:04:51,140 | INFO     | intersect: 2457834.9739130433
[2026-04-13 11:05:23] 2026-04-13 15:04:51,140 | INFO     | chi2: 2.3220827311650467
[2026-04-13 11:05:23] 2026-04-13 15:04:51,141 | INFO     | sum of square deviations: 412686807.5
[2026-04-13 11:05:23] 2026-04-13 15:04:51,141 | INFO     | sum of deviations: 15231498944.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,141 | INFO     | mean x (centered): 0.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,142 | INFO     | mean y: 2476168.109090909
[2026-04-13 11:05:23] 2026-04-13 15:04:51,142 | INFO     | intersect: 2476168.109090909
[2026-04-13 11:05:23] 2026-04-13 15:04:51,142 | INFO     | chi2: 1.477953977212165
[2026-04-13 11:05:23] 2026-04-13 15:04:51,142 | INFO     | current chi2=1.477953977212165 (change=36.352225638806644 %)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,142 | INFO     | sum of square deviations: 358927660.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,143 | INFO     | sum of deviations: 14475593349.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,143 | INFO     | mean x (centered): 0.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,143 | INFO     | mean y: 2474022.180952381
[2026-04-13 11:05:23] 2026-04-13 15:04:51,143 | INFO     | intersect: 2474022.180952381
[2026-04-13 11:05:23] 2026-04-13 15:04:51,144 | INFO     | chi2: 1.4807538659666613
[2026-04-13 11:05:23] 2026-04-13 15:04:51,144 | INFO     | current chi2=1.4807538659666613 (change=-0.18944356845113608 %)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,144 | INFO     | right removable region: 104
[2026-04-13 11:05:23] 2026-04-13 15:04:51,144 | INFO     | sum of square deviations: 412686807.5
[2026-04-13 11:05:23] 2026-04-13 15:04:51,145 | INFO     | sum of deviations: -8551678236.5
[2026-04-13 11:05:23] 2026-04-13 15:04:51,145 | INFO     | mean x (centered): 0.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,145 | INFO     | mean y: 2499457.9727272727
[2026-04-13 11:05:23] 2026-04-13 15:04:51,145 | INFO     | intersect: 2499457.9727272727
[2026-04-13 11:05:23] 2026-04-13 15:04:51,145 | INFO     | chi2: 0.9139951931402787
[2026-04-13 11:05:23] 2026-04-13 15:04:51,145 | INFO     | current chi2=0.9139951931402787 (change=60.638990985402806 %)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,146 | INFO     | sum of square deviations: 358927660.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,146 | INFO     | sum of deviations: -5802283644.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,146 | INFO     | mean x (centered): 0.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,146 | INFO     | mean y: 2491540.780952381
[2026-04-13 11:05:23] 2026-04-13 15:04:51,147 | INFO     | intersect: 2491540.780952381
[2026-04-13 11:05:23] 2026-04-13 15:04:51,147 | INFO     | chi2: 0.888132963380555
[2026-04-13 11:05:23] 2026-04-13 15:04:51,147 | INFO     | current chi2=0.888132963380555 (change=2.829580500403609 %)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,147 | INFO     | left removable region: 10
[2026-04-13 11:05:23] 2026-04-13 15:04:51,147 | INFO     | sum of square deviations: 257521107.5
[2026-04-13 11:05:23] 2026-04-13 15:04:51,148 | INFO     | sum of deviations: 1336903937.9999998
[2026-04-13 11:05:23] 2026-04-13 15:04:51,148 | INFO     | mean x (centered): 0.0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,148 | INFO     | mean y: 2512890.7021276597
[2026-04-13 11:05:23] 2026-04-13 15:04:51,148 | INFO     | intersect: 2512890.7021276597
[2026-04-13 11:05:23] 2026-04-13 15:04:51,149 | INFO     | chi2: 0.0010101870074553743
[2026-04-13 11:05:23] 2026-04-13 15:04:51,149 | INFO     | current memory leak: 5.19 B/s (using 94 data points, chi2=0.00)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,149 | INFO     | could have reported an average CPU frequency of 1712 MHz (7 samples)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,149 | INFO     | ..............................
[2026-04-13 11:05:23] 2026-04-13 15:04:51,149 | INFO     | . Timing measurements:
[2026-04-13 11:05:23] 2026-04-13 15:04:51,149 | INFO     | . get job = 0 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | . initial setup = 8 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | . payload setup = 17 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | . stage-in = 0 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | . payload execution = 6984 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | . stage-out = 0 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | . log creation = 0 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,150 | INFO     | ..............................
[2026-04-13 11:05:23] 2026-04-13 15:04:51,233 | INFO     | 
[2026-04-13 11:05:23] 2026-04-13 15:04:51,233 | INFO     | job summary report
[2026-04-13 11:05:23] 2026-04-13 15:04:51,234 | INFO     | --------------------------------------------------
[2026-04-13 11:05:23] 2026-04-13 15:04:51,234 | INFO     | PanDA job id: 7089337478
[2026-04-13 11:05:23] 2026-04-13 15:04:51,234 | INFO     | task id: 49263200
[2026-04-13 11:05:23] 2026-04-13 15:04:51,234 | INFO     | errors: (none)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,234 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 11:05:23] 2026-04-13 15:04:51,234 | INFO     | pilot state: finished 
[2026-04-13 11:05:23] 2026-04-13 15:04:51,235 | INFO     | transexitcode: 0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,235 | INFO     | exeerrorcode: 0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,235 | INFO     | exeerrordiag: 
[2026-04-13 11:05:23] 2026-04-13 15:04:51,235 | INFO     | exitcode: 0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,235 | INFO     | exitmsg: OK
[2026-04-13 11:05:23] 2026-04-13 15:04:51,236 | INFO     | cpuconsumptiontime: 51924 s
[2026-04-13 11:05:23] 2026-04-13 15:04:51,236 | INFO     | nevents: 400
[2026-04-13 11:05:23] 2026-04-13 15:04:51,236 | INFO     | neventsw: 0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,236 | INFO     | pid: 23850
[2026-04-13 11:05:23] 2026-04-13 15:04:51,236 | INFO     | pgrp: 23850
[2026-04-13 11:05:23] 2026-04-13 15:04:51,236 | INFO     | corecount: 8
[2026-04-13 11:05:23] 2026-04-13 15:04:51,237 | INFO     | event service: False
[2026-04-13 11:05:23] 2026-04-13 15:04:51,237 | INFO     | sizes: {0: 2279719, 1: 2281548, 11: 2281548, 7005: 2308823, 7006: 2317821, 7009: 2317877, 7011: 2318199}
[2026-04-13 11:05:23] 2026-04-13 15:04:51,237 | INFO     | --------------------------------------------------
[2026-04-13 11:05:23] 2026-04-13 15:04:51,237 | INFO     | 
[2026-04-13 11:05:23] 2026-04-13 15:04:51,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 11:05:23] 2026-04-13 15:04:51,265 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,269 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,269 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 11:05:23] 2026-04-13 15:04:51,270 | INFO     | job 7089337478 has completed (purged errors)
[2026-04-13 11:05:23] 2026-04-13 15:04:51,270 | INFO     | overall cleanup function is called
[2026-04-13 11:05:23] 2026-04-13 15:04:52,069 | WARNING  | process 23850 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 11:05:23] 2026-04-13 15:04:52,146 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,147 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,147 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-13 11:05:23] 2026-04-13 15:04:52,147 | WARNING  | maxPSS not found in memory monitor output
[2026-04-13 11:05:23] 2026-04-13 15:04:52,148 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7089337478/payload.stdout) since it has not been created yet
[2026-04-13 11:05:23] 2026-04-13 15:04:52,148 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 11:05:23] 2026-04-13 15:04:52,169 | INFO     | sufficient remaining disk space (18508414976 B)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,170 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-13 11:05:23] 2026-04-13 15:04:52,170 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7089337478/HITS.49263200._061493.pool.root.1 since it does not exist
[2026-04-13 11:05:23] 2026-04-13 15:04:52,259 | INFO     | number of running child processes to parent process 23850: 1
[2026-04-13 11:05:23] 2026-04-13 15:04:52,260 | INFO     | maximum number of monitored processes: 6
[2026-04-13 11:05:23] 2026-04-13 15:04:52,260 | INFO     | aborting job monitoring since job object (job id=7089337478) has expired
[2026-04-13 11:05:23] 2026-04-13 15:04:52,278 | INFO     | --- collectZombieJob: --- 10, [23850]
[2026-04-13 11:05:23] 2026-04-13 15:04:52,279 | INFO     | zombie collector waiting for pid 23850
[2026-04-13 11:05:23] 2026-04-13 15:04:52,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 11:05:23] 2026-04-13 15:04:52,279 | INFO     | collected zombie processes
[2026-04-13 11:05:23] 2026-04-13 15:04:52,279 | INFO     | will attempt to kill all subprocesses of pid=23850
[2026-04-13 11:05:23] 2026-04-13 15:04:52,364 | INFO     | process IDs to be killed: [23850] (in reverse order)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,421 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 11:05:23] 2026-04-13 15:04:52,425 | INFO     | did not find any defunct processes belonging to 23850
[2026-04-13 11:05:23] 2026-04-13 15:04:52,428 | INFO     | did not find any defunct processes belonging to 23850
[2026-04-13 11:05:23] 2026-04-13 15:04:52,428 | INFO     | Ready for new job
[2026-04-13 11:05:23] 2026-04-13 15:04:52,429 | INFO     | **************************************
[2026-04-13 11:05:23] 2026-04-13 15:04:52,429 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 11:05:23] 2026-04-13 15:04:52,429 | INFO     | **************************************
[2026-04-13 11:05:23] 2026-04-13 15:04:52,430 | INFO     | 
[2026-04-13 11:05:23] 2026-04-13 15:04:52,430 | INFO     | architecture information:
[2026-04-13 11:05:23] 2026-04-13 15:04:52,431 | INFO     | executing command: cat /etc/os-release
[2026-04-13 11:05:23] 2026-04-13 15:04:52,450 | INFO     | cat /etc/os-release:
[2026-04-13 11:05:23] NAME="CentOS Linux"
[2026-04-13 11:05:23] VERSION="7 (Core)"
[2026-04-13 11:05:23] ID="centos"
[2026-04-13 11:05:23] ID_LIKE="rhel fedora"
[2026-04-13 11:05:23] VERSION_ID="7"
[2026-04-13 11:05:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 11:05:23] ANSI_COLOR="0;31"
[2026-04-13 11:05:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 11:05:23] HOME_URL="https://www.centos.org/"
[2026-04-13 11:05:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 11:05:23] 
[2026-04-13 11:05:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 11:05:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 11:05:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 11:05:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 11:05:23] 
[2026-04-13 11:05:23] 2026-04-13 15:04:52,451 | INFO     | **************************************
[2026-04-13 11:05:23] 2026-04-13 15:04:52,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 11:05:23] 2026-04-13 15:04:52,973 | INFO     | sufficient remaining disk space (18508414976 B)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 11:05:23] 2026-04-13 15:04:52,974 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 11:05:23] 2026-04-13 15:04:52,974 | INFO     | update_server=False
[2026-04-13 11:05:23] 2026-04-13 15:04:52,974 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 11:05:23] 2026-04-13 15:04:52,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 11:05:23] 2026-04-13 15:04:52,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 11:05:23] 2026-04-13 15:04:52,975 | INFO     | will abort loop
[2026-04-13 11:05:23] 2026-04-13 15:04:53,314 | INFO     | all payload control threads have been joined
[2026-04-13 11:05:23] 2026-04-13 15:04:53,566 | INFO     | all data control threads have been joined
[2026-04-13 11:05:23] 2026-04-13 15:04:53,662 | INFO     | all job control threads have been joined
[2026-04-13 11:05:23] 2026-04-13 15:04:53,980 | INFO     | [job] retrieve thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:53,980 | INFO     | [job] queue monitor thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:53,981 | INFO     | [job] job monitor thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,031 | INFO     | [job] validate thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,055 | INFO     | [payload] failed_post thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,129 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,140 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 11:05:23] 2026-04-13 15:04:54,262 | INFO     | [payload] validate_post thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,320 | INFO     | [payload] control thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,572 | INFO     | [data] control thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,634 | INFO     | [data] copytool_in thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:54,663 | INFO     | [job] control thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:55,223 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:55,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 11:05:23] 2026-04-13 15:04:56,230 | INFO     | [data] copytool_out thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:59,379 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:04:59,643 | INFO     | [monitor] cgroup control has ended
[2026-04-13 11:05:23] 2026-04-13 15:05:03,867 | INFO     | job.realtimelogging is not enabled
[2026-04-13 11:05:23] 2026-04-13 15:05:04,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 11:05:23] 2026-04-13 15:05:06,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660456392512)>', '<ExcThread(monitor, started 140659373635328)>']
[2026-04-13 11:05:23] 2026-04-13 15:05:11,444 | INFO     | all workflow threads have been joined
[2026-04-13 11:05:23] 2026-04-13 15:05:11,448 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 11:05:23] 2026-04-13 15:05:11,448 | INFO     | traces error code: 0
[2026-04-13 11:05:23] 2026-04-13 15:05:11,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 11:05:23] 2026-04-13 15:05:23,038 | INFO     | PID=19364 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-13 11:05:23] 2026-04-13 15:05:23,039 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 11:05:23] 2026-04-13 15:05:23,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 11:05:23] 2026-04-13 15:05:23,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 11:05:23] 2026-04-13 15:05:23,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 11:05:23] 2026-04-13 15:05:23,040 | INFO     | [monitor] control thread has ended
[2026-04-13 11:05:23] 2026-04-13 15:05:23,141 [wrapper] ==== pilot stdout END ====
[2026-04-13 11:05:23] 2026-04-13 15:05:23,146 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 11:05:23] 2026-04-13 15:05:23,150 [wrapper] pilotpid: 19364
[2026-04-13 11:05:23] 2026-04-13 15:05:23,155 [wrapper] Pilot exit status: 0
[2026-04-13 11:05:23] 2026-04-13 15:05:23,173 [wrapper] pandaids: 7089337478
[2026-04-13 11:05:23] 2026-04-13 15:05:23,218 [wrapper] cleanup supervisor_pilot  4008 19365
[2026-04-13 11:05:23] 2026-04-13 15:05:23,223 [wrapper] Test setup, not cleaning
[2026-04-13 11:05:23] 2026-04-13 15:05:23,228 [wrapper] apfmon messages muted
[2026-04-13 11:05:23] 2026-04-13 15:05:23,232 [wrapper] ==== wrapper stdout END ====
[2026-04-13 11:05:23] 2026-04-13 15:05:23,236 [wrapper] ==== wrapper stderr END ====
[2026-04-13 11:05:23]  *** Error codes and diagnostics ***
[2026-04-13 11:05:23]     "exeErrorCode": 0,
[2026-04-13 11:05:23]     "pilotErrorCode": 0,
[2026-04-13 11:05:23]  *** Listing of results directory ***
[2026-04-13 11:05:23] total 413396
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas    644190 Apr 13 05:24 pilot3.tar.gz
[2026-04-13 11:05:23] -rwx------ 1 boincer umatlas     36322 Apr 13 05:55 runpilot2-wrapper.sh
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas      5094 Apr 13 05:57 queuedata.json
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas       100 Apr 13 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 11:05:23] -rwxr-xr-x 1 boincer umatlas      7986 Apr 13 09:07 run_atlas
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas       105 Apr 13 09:07 job.xml
[2026-04-13 11:05:23] -rw-r--r-- 2 boincer umatlas 224146375 Apr 13 09:07 EVNT.49263198._001726.pool.root.1
[2026-04-13 11:05:23] -rw-r--r-- 2 boincer umatlas     15665 Apr 13 09:07 start_atlas.sh
[2026-04-13 11:05:23] drwxrwx--x 2 boincer umatlas      4096 Apr 13 09:07 shared
[2026-04-13 11:05:23] -rw-r--r-- 2 boincer umatlas    656932 Apr 13 09:07 input.tar.gz
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas         0 Apr 13 09:07 boinc_lockfile
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas      2576 Apr 13 09:07 pandaJob.out
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas        57 Apr 13 09:07 setup.sh.local
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas    997743 Apr 13 09:07 agis_schedconf.cvmfs.json
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas   1511579 Apr 13 09:07 agis_ddmendpoints.agis.ALL.json
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas       431 Apr 13 09:07 workernode_map.json
[2026-04-13 11:05:23] drwx------ 5 boincer umatlas      4096 Apr 13 09:07 pilot3
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas      5826 Apr 13 11:02 init_data.xml
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas 193119755 Apr 13 11:04 HITS.49263200._061493.pool.root.1
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas       488 Apr 13 11:04 boinc_task_state.xml
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas      1047 Apr 13 11:04 memory_monitor_summary.json
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas    338421 Apr 13 11:04 log.49263200._061493.job.log.tgz.1
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas      6422 Apr 13 11:04 heartbeat_new.json
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas      6313 Apr 13 11:04 heartbeat.json
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas        27 Apr 13 11:04 wrapper_checkpoint.txt
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 11:04 boinc_mmap_file
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas        95 Apr 13 11:05 pilot_heartbeat.json
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas       745 Apr 13 11:05 pilotlog.txt
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas    655579 Apr 13 11:05 log.49263200._061493.job.log.1
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas       357 Apr 13 11:05 output.list
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas       410 Apr 13 11:05 runtime_log
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas   1013760 Apr 13 11:05 result.tar.gz
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas      8963 Apr 13 11:05 runtime_log.err
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas       659 Apr 13 11:05 bd80f809ee8e.diag
[2026-04-13 11:05:23] -rw-r--r-- 1 boincer umatlas     21263 Apr 13 11:05 stderr.txt
[2026-04-13 11:05:23] HITS file was successfully produced:
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas 193119755 Apr 13 11:04 shared/HITS.pool.root.1
[2026-04-13 11:05:23]  *** Contents of shared directory: ***
[2026-04-13 11:05:23] total 409148
[2026-04-13 11:05:23] -rw-r--r-- 2 boincer umatlas 224146375 Apr 13 09:07 ATLAS.root_0
[2026-04-13 11:05:23] -rw-r--r-- 2 boincer umatlas     15665 Apr 13 09:07 start_atlas.sh
[2026-04-13 11:05:23] -rw-r--r-- 2 boincer umatlas    656932 Apr 13 09:07 input.tar.gz
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas 193119755 Apr 13 11:04 HITS.pool.root.1
[2026-04-13 11:05:23] -rw------- 1 boincer umatlas   1013760 Apr 13 11:05 result.tar.gz
11:05:24 (14782): run_atlas exited; CPU time 51950.178427
11:05:24 (14782): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN