Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:38 (1200757): wrapper (7.7.26015): starting
14:56:38 (1200757): wrapper: running run_atlas (--nthreads 4)
[2026-04-16 14:56:39] Arguments: --nthreads 4
[2026-04-16 14:56:39] Threads: 4
[2026-04-16 14:56:39] Checking for CVMFS
[2026-04-16 14:56:39] No cvmfs_config command found, will try listing directly
[2026-04-16 14:56:39] CVMFS is ok
[2026-04-16 14:56:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-16 14:56:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-16 14:56:39] Further information can be found at the LHC@home message board.
[2026-04-16 14:56:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-16 14:56:39] Checking for apptainer binary...
[2026-04-16 14:56:39] which: no apptainer in ((null))
[2026-04-16 14:56:39] apptainer is not installed, using version from CVMFS
[2026-04-16 14:56:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-16 14:56:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-16 14:56:39] apptainer works
[2026-04-16 14:56:39] Set ATHENA_PROC_NUMBER=4
[2026-04-16 14:56:39] Set ATHENA_CORE_NUMBER=4
[2026-04-16 14:56:39] Starting ATLAS job with PandaID=7089303070
[2026-04-16 14:56:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-16 18:30:47]  *** The last 200 lines of the pilot log: ***
[2026-04-16 18:30:47] 2026-04-16 16:29:51,159 | INFO     | .. there are 20 such processes running
[2026-04-16 18:30:47] 2026-04-16 16:29:52,270 | INFO     | monitor loop #840: job 0:7089303070 is in state 'finished'
[2026-04-16 18:30:47] 2026-04-16 16:29:52,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,284 | INFO     | job 7089303070 has state=finished
[2026-04-16 18:30:47] 2026-04-16 16:29:52,285 | INFO     | preparing for final server update for job 7089303070 in state='finished'
[2026-04-16 18:30:47] 2026-04-16 16:29:52,285 | INFO     | reading metadata from: /var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7089303070/jobReport.json
[2026-04-16 18:30:47] 2026-04-16 16:29:52,287 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot104/slots/1/workernode_map.json
[2026-04-16 18:30:47] 2026-04-16 16:29:52,288 | INFO     | this job has now completed (state=finished)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,288 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,288 | INFO     | log transfer has been attempted: DONE
[2026-04-16 18:30:47] 2026-04-16 16:29:52,288 | INFO     | job 7089303070 has finished - writing final server update
[2026-04-16 18:30:47] 2026-04-16 16:29:52,288 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9354/.job.ad'
[2026-04-16 18:30:47] 2026-04-16 16:29:52,288 | INFO     | total number of processed events: 400 (read)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,312 | INFO     | using path: /var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7089303070/memory_monitor_summary.json (trf name=prmon)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,312 | INFO     | extracted standard info from prmon json
[2026-04-16 18:30:47] 2026-04-16 16:29:52,312 | INFO     | extracted standard memory fields from prmon json
[2026-04-16 18:30:47] 2026-04-16 16:29:52,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-16 18:30:47] 2026-04-16 16:29:52,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-16 18:30:47] 2026-04-16 16:29:52,316 | INFO     | fitting pss+swap vs Time
[2026-04-16 18:30:47] 2026-04-16 16:29:52,317 | INFO     | sum of square deviations: 2750295288.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,318 | INFO     | sum of deviations: 62041736101.00007
[2026-04-16 18:30:47] 2026-04-16 16:29:52,318 | INFO     | mean x (centered): 0.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,318 | INFO     | mean y: 2265085.884057971
[2026-04-16 18:30:47] 2026-04-16 16:29:52,318 | INFO     | intersect: 2265085.884057971
[2026-04-16 18:30:47] 2026-04-16 16:29:52,319 | INFO     | chi2: 4.862654507119362
[2026-04-16 18:30:47] 2026-04-16 16:29:52,319 | INFO     | sum of square deviations: 2555770710.5
[2026-04-16 18:30:47] 2026-04-16 16:29:52,320 | INFO     | sum of deviations: 73362581134.50002
[2026-04-16 18:30:47] 2026-04-16 16:29:52,320 | INFO     | mean x (centered): 0.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,320 | INFO     | mean y: 2273760.371287129
[2026-04-16 18:30:47] 2026-04-16 16:29:52,321 | INFO     | intersect: 2273760.371287129
[2026-04-16 18:30:47] 2026-04-16 16:29:52,321 | INFO     | chi2: 4.0872230350034835
[2026-04-16 18:30:47] 2026-04-16 16:29:52,321 | INFO     | current chi2=4.0872230350034835 (change=15.94667009512144 %)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,321 | INFO     | right removable region: 201
[2026-04-16 18:30:47] 2026-04-16 16:29:52,321 | INFO     | sum of square deviations: 2555770710.5
[2026-04-16 18:30:47] 2026-04-16 16:29:52,323 | INFO     | sum of deviations: 1545775624.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,323 | INFO     | mean x (centered): 0.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,323 | INFO     | mean y: 2312394.4653465347
[2026-04-16 18:30:47] 2026-04-16 16:29:52,323 | INFO     | intersect: 2312394.4653465347
[2026-04-16 18:30:47] 2026-04-16 16:29:52,323 | INFO     | chi2: 0.9259184023745446
[2026-04-16 18:30:47] 2026-04-16 16:29:52,323 | INFO     | current chi2=0.9259184023745446 (change=80.95858134648643 %)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,324 | INFO     | sum of square deviations: 2370641658.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,325 | INFO     | sum of deviations: -6904379977.000001
[2026-04-16 18:30:47] 2026-04-16 16:29:52,325 | INFO     | mean x (centered): 0.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,325 | INFO     | mean y: 2319302.883248731
[2026-04-16 18:30:47] 2026-04-16 16:29:52,325 | INFO     | intersect: 2319302.883248731
[2026-04-16 18:30:47] 2026-04-16 16:29:52,325 | INFO     | chi2: 0.8336615832103706
[2026-04-16 18:30:47] 2026-04-16 16:29:52,325 | INFO     | current chi2=0.8336615832103706 (change=9.963817430086566 %)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,326 | INFO     | left removable region: 10
[2026-04-16 18:30:47] 2026-04-16 16:29:52,326 | INFO     | sum of square deviations: 2160561440.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,327 | INFO     | sum of deviations: 5464869037.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,327 | INFO     | mean x (centered): 0.0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,327 | INFO     | mean y: 2329799.9633507854
[2026-04-16 18:30:47] 2026-04-16 16:29:52,327 | INFO     | intersect: 2329799.9633507854
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | chi2: 0.0010247029216764816
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | current memory leak: 2.53 B/s (using 191 data points, chi2=0.00)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | could have reported an average CPU frequency of 2702 MHz (11 samples)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | ..............................
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | . Timing measurements:
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | . get job = 0 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | . initial setup = 32 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,328 | INFO     | . payload setup = 68 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,329 | INFO     | . stage-in = 0 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,329 | INFO     | . payload execution = 12611 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,329 | INFO     | . stage-out = 1 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,329 | INFO     | . log creation = 0 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,329 | INFO     | ..............................
[2026-04-16 18:30:47] 2026-04-16 16:29:52,420 | INFO     | 
[2026-04-16 18:30:47] 2026-04-16 16:29:52,420 | INFO     | job summary report
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | --------------------------------------------------
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | PanDA job id: 7089303070
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | task id: 49263200
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | errors: (none)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | pilot state: finished 
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | transexitcode: 0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | exeerrorcode: 0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | exeerrordiag: 
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | exitcode: 0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | exitmsg: OK
[2026-04-16 18:30:47] 2026-04-16 16:29:52,421 | INFO     | cpuconsumptiontime: 38598 s
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | nevents: 400
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | neventsw: 0
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | pid: 1226288
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | pgrp: 1226288
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | corecount: 4
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | event service: False
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | sizes: {0: 2279752, 1: 2281581, 12684: 2311754, 12686: 2320776, 12688: 2320832, 12689: 2321026}
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | --------------------------------------------------
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | 
[2026-04-16 18:30:47] 2026-04-16 16:29:52,422 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/1
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,454 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,454 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-16 18:30:47] 2026-04-16 16:29:52,454 | INFO     | job 7089303070 has completed (purged errors)
[2026-04-16 18:30:47] 2026-04-16 16:29:52,454 | INFO     | overall cleanup function is called
[2026-04-16 18:30:47] 2026-04-16 16:29:53,464 | INFO     | --- collectZombieJob: --- 10, [1226288]
[2026-04-16 18:30:47] 2026-04-16 16:29:53,464 | INFO     | zombie collector waiting for pid 1226288
[2026-04-16 18:30:47] 2026-04-16 16:29:53,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-16 18:30:47] 2026-04-16 16:29:53,464 | INFO     | collected zombie processes
[2026-04-16 18:30:47] 2026-04-16 16:29:53,464 | INFO     | will attempt to kill all subprocesses of pid=1226288
[2026-04-16 18:30:47] 2026-04-16 16:29:54,209 | INFO     | process IDs to be killed: [1226288] (in reverse order)
[2026-04-16 18:30:47] 2026-04-16 16:29:54,506 | WARNING  | found no corresponding commands to process id(s)
[2026-04-16 18:30:47] 2026-04-16 16:29:54,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-16 18:30:47] 2026-04-16 16:29:54,537 | INFO     | did not find any defunct processes belonging to 1226288
[2026-04-16 18:30:47] 2026-04-16 16:29:54,562 | INFO     | did not find any defunct processes belonging to 1226288
[2026-04-16 18:30:47] 2026-04-16 16:29:54,562 | INFO     | Ready for new job
[2026-04-16 18:30:47] 2026-04-16 16:29:54,564 | INFO     | **************************************
[2026-04-16 18:30:47] 2026-04-16 16:29:54,564 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-16 18:30:47] 2026-04-16 16:29:54,564 | INFO     | **************************************
[2026-04-16 18:30:47] 2026-04-16 16:29:54,565 | INFO     | 
[2026-04-16 18:30:47] 2026-04-16 16:29:54,573 | INFO     | architecture information:
[2026-04-16 18:30:47] 2026-04-16 16:29:54,573 | INFO     | executing command: cat /etc/os-release
[2026-04-16 18:30:47] 2026-04-16 16:29:54,595 | INFO     | cat /etc/os-release:
[2026-04-16 18:30:47] NAME="CentOS Linux"
[2026-04-16 18:30:47] VERSION="7 (Core)"
[2026-04-16 18:30:47] ID="centos"
[2026-04-16 18:30:47] ID_LIKE="rhel fedora"
[2026-04-16 18:30:47] VERSION_ID="7"
[2026-04-16 18:30:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-16 18:30:47] ANSI_COLOR="0;31"
[2026-04-16 18:30:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-16 18:30:47] HOME_URL="https://www.centos.org/"
[2026-04-16 18:30:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-16 18:30:47] 
[2026-04-16 18:30:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-16 18:30:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-16 18:30:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-16 18:30:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-16 18:30:47] 
[2026-04-16 18:30:47] 2026-04-16 16:29:54,596 | INFO     | **************************************
[2026-04-16 18:30:47] 2026-04-16 16:29:55,099 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/1
[2026-04-16 18:30:47] 2026-04-16 16:29:55,125 | INFO     | sufficient remaining disk space (302932557824 B)
[2026-04-16 18:30:47] 2026-04-16 16:29:55,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-16 18:30:47] 2026-04-16 16:29:55,126 | INFO     | current server update state: UPDATING_FINAL
[2026-04-16 18:30:47] 2026-04-16 16:29:55,126 | INFO     | update_server=False
[2026-04-16 18:30:47] 2026-04-16 16:29:55,126 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-16 18:30:47] 2026-04-16 16:29:55,324 | INFO     | all data control threads have been joined
[2026-04-16 18:30:47] 2026-04-16 16:29:55,367 | INFO     | all payload control threads have been joined
[2026-04-16 18:30:47] 2026-04-16 16:29:55,456 | INFO     | all job control threads have been joined
[2026-04-16 18:30:47] 2026-04-16 16:29:55,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-16 18:30:47] 2026-04-16 16:29:55,780 | INFO     | aborting loop
[2026-04-16 18:30:47] 2026-04-16 16:29:56,131 | INFO     | [job] retrieve thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,140 | INFO     | [payload] validate_post thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,330 | INFO     | [data] control thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,372 | INFO     | [payload] control thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,461 | INFO     | [job] control thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,552 | INFO     | [job] create_data_payload thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-16 18:30:47] 2026-04-16 16:29:56,638 | INFO     | [job] validate thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,688 | INFO     | [payload] validate_pre thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:56,785 | INFO     | [job] job monitor thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:57,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-16 18:30:47] 2026-04-16 16:29:57,049 | INFO     | [payload] execute_payloads thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:57,071 | INFO     | [data] copytool_in thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:57,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-16 18:30:47] 2026-04-16 16:29:57,552 | INFO     | [payload] failed_post thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:57,586 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:58,438 | INFO     | [job] queue monitor thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:29:58,587 | INFO     | [data] copytool_out thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:30:01,036 | INFO     | [data] queue_monitor thread has finished
[2026-04-16 18:30:47] 2026-04-16 16:30:26,110 | INFO     | PID=1219454 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-16 18:30:47] 2026-04-16 16:30:26,110 | INFO     | .. there are 20 such processes running
[2026-04-16 18:30:47] 2026-04-16 16:30:26,111 | INFO     | found 0 job(s) in 20 queues
[2026-04-16 18:30:47] 2026-04-16 16:30:26,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-16 18:30:47] 2026-04-16 16:30:26,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-16 18:30:47] 2026-04-16 16:30:42,155 | INFO     | [monitor] cgroup control has ended
[2026-04-16 18:30:47] 2026-04-16 16:30:42,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23013737289536)>', '<ExcThread(monitor, started 23013430896384)>']
[2026-04-16 18:30:47] 2026-04-16 16:30:43,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-16 18:30:47] 2026-04-16 16:30:43,199 | INFO     | [monitor] control thread has ended
[2026-04-16 18:30:47] 2026-04-16 16:30:47,406 | INFO     | all workflow threads have been joined
[2026-04-16 18:30:47] 2026-04-16 16:30:47,407 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-16 18:30:47] 2026-04-16 16:30:47,407 | INFO     | traces error code: 0
[2026-04-16 18:30:47] 2026-04-16 16:30:47,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-16 18:30:47] 2026-04-16 16:30:47,585 [wrapper] ==== pilot stdout END ====
[2026-04-16 18:30:47] 2026-04-16 16:30:47,588 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-16 18:30:47] 2026-04-16 16:30:47,592 [wrapper] pilotpid: 1219454
[2026-04-16 18:30:47] 2026-04-16 16:30:47,595 [wrapper] Pilot exit status: 0
[2026-04-16 18:30:47] 2026-04-16 16:30:47,609 [wrapper] pandaids: 7089303070
[2026-04-16 18:30:47] 2026-04-16 16:30:47,781 [wrapper] cleanup supervisor_pilot 1671178 1219456
[2026-04-16 18:30:47] 2026-04-16 16:30:47,785 [wrapper] Test setup, not cleaning
[2026-04-16 18:30:47] 2026-04-16 16:30:47,789 [wrapper] apfmon messages muted
[2026-04-16 18:30:47] 2026-04-16 16:30:47,791 [wrapper] ==== wrapper stdout END ====
[2026-04-16 18:30:47] 2026-04-16 16:30:47,795 [wrapper] ==== wrapper stderr END ====
[2026-04-16 18:30:47]  *** Error codes and diagnostics ***
[2026-04-16 18:30:47]     "exeErrorCode": 0,
[2026-04-16 18:30:47]     "pilotErrorCode": 0,
[2026-04-16 18:30:47]  *** Listing of results directory ***
[2026-04-16 18:30:47] total 417772
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc    644190 Apr 13 10:55 pilot3.tar.gz
[2026-04-16 18:30:47] -rwx------. 1 boinc boinc     36322 Apr 13 10:57 runpilot2-wrapper.sh
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc      5094 Apr 13 11:10 queuedata.json
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc       100 Apr 16 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-16 18:30:47] -rwxr-xr-x. 1 boinc boinc      7986 Apr 16 14:00 run_atlas
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc       105 Apr 16 14:00 job.xml
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc      6540 Apr 16 14:56 init_data.xml
[2026-04-16 18:30:47] -rw-r--r--. 2 boinc boinc 224892464 Apr 16 14:56 EVNT.49263198._001702.pool.root.1
[2026-04-16 18:30:47] drwxrwx--x. 2 boinc boinc      4096 Apr 16 14:56 shared
[2026-04-16 18:30:47] -rw-r--r--. 2 boinc boinc    656927 Apr 16 14:56 input.tar.gz
[2026-04-16 18:30:47] -rw-r--r--. 2 boinc boinc     15665 Apr 16 14:56 start_atlas.sh
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc         0 Apr 16 14:56 boinc_lockfile
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc      2576 Apr 16 14:56 pandaJob.out
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc    996752 Apr 16 14:57 agis_schedconf.cvmfs.json
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc       439 Apr 16 14:58 workernode_map.json
[2026-04-16 18:30:47] drwx------. 5 boinc boinc      4096 Apr 16 14:58 pilot3
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc 195945828 Apr 16 18:29 HITS.49263200._060877.pool.root.1
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc       488 Apr 16 18:29 boinc_task_state.xml
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc      1031 Apr 16 18:29 memory_monitor_summary.json
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc   1511633 Apr 16 18:29 agis_ddmendpoints.agis.ALL.json
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc    318160 Apr 16 18:29 log.49263200._060877.job.log.tgz.1
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc      6379 Apr 16 18:29 heartbeat_new.json
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc      6270 Apr 16 18:29 heartbeat.json
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc        28 Apr 16 18:30 wrapper_checkpoint.txt
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc      8192 Apr 16 18:30 boinc_mmap_file
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc        95 Apr 16 18:30 pilot_heartbeat.json
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc      4830 Apr 16 18:30 pilotlog.txt
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc   1132183 Apr 16 18:30 log.49263200._060877.job.log.1
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc       357 Apr 16 18:30 output.list
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc       410 Apr 16 18:30 runtime_log
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc   1464320 Apr 16 18:30 result.tar.gz
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc      8844 Apr 16 18:30 runtime_log.err
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc       666 Apr 16 18:30 affc94886f25.diag
[2026-04-16 18:30:47] -rw-r--r--. 1 boinc boinc     21045 Apr 16 18:30 stderr.txt
[2026-04-16 18:30:47] HITS file was successfully produced:
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc 195945828 Apr 16 18:29 shared/HITS.pool.root.1
[2026-04-16 18:30:47]  *** Contents of shared directory: ***
[2026-04-16 18:30:47] total 413080
[2026-04-16 18:30:47] -rw-r--r--. 2 boinc boinc 224892464 Apr 16 14:56 ATLAS.root_0
[2026-04-16 18:30:47] -rw-r--r--. 2 boinc boinc    656927 Apr 16 14:56 input.tar.gz
[2026-04-16 18:30:47] -rw-r--r--. 2 boinc boinc     15665 Apr 16 14:56 start_atlas.sh
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc 195945828 Apr 16 18:29 HITS.pool.root.1
[2026-04-16 18:30:47] -rw-------. 1 boinc boinc   1464320 Apr 16 18:30 result.tar.gz
18:30:49 (1200757): run_atlas exited; CPU time 39347.263098
18:30:49 (1200757): called boinc_finish(0)

</stderr_txt>
]]>

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