Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:52 (3772534): wrapper (7.7.26015): starting
12:43:52 (3772534): wrapper: running run_atlas (--nthreads 12)
[2026-04-14 12:43:52] Arguments: --nthreads 12
[2026-04-14 12:43:52] Threads: 12
[2026-04-14 12:43:52] Checking for CVMFS
[2026-04-14 12:43:52] No cvmfs_config command found, will try listing directly
[2026-04-14 12:43:52] CVMFS is ok
[2026-04-14 12:43:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 12:43:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 12:43:52] Further information can be found at the LHC@home message board.
[2026-04-14 12:43:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 12:43:52] Checking for apptainer binary...
[2026-04-14 12:43:52] which: no apptainer in ((null))
[2026-04-14 12:43:52] apptainer is not installed, using version from CVMFS
[2026-04-14 12:43:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 12:43:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-04-14 12:43:53] apptainer works
[2026-04-14 12:43:53] Set ATHENA_PROC_NUMBER=12
[2026-04-14 12:43:53] Set ATHENA_CORE_NUMBER=12
[2026-04-14 12:43:53] Starting ATLAS job with PandaID=7089335629
[2026-04-14 12:43:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 13:13:12]  *** The last 200 lines of the pilot log: ***
[2026-04-14 13:13:12]  filesize=345970
[2026-04-14 13:13:12]  filetype=log
[2026-04-14 13:13:12]  guid=fb9f030e-de6b-4822-8954-98d7a2f3b131
[2026-04-14 13:13:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-14 13:13:12]  is_altstaged=None
[2026-04-14 13:13:12]  is_tar=False
[2026-04-14 13:13:12]  lfn=log.49263191._069802.job.log.tgz.1
[2026-04-14 13:13:12]  mtime=0
[2026-04-14 13:13:12]  protocol_id=None
[2026-04-14 13:13:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-14 13:13:12]  replicas=None
[2026-04-14 13:13:12]  scope=mc23_13p6TeV
[2026-04-14 13:13:12]  status=None
[2026-04-14 13:13:12]  status_code=0
[2026-04-14 13:13:12]  storage_token=
[2026-04-14 13:13:12]  surl=/var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7089335629/log.49263191._069802.job.log.tgz.1
[2026-04-14 13:13:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/e3/log.49263191._069802.job.log.tgz.1
[2026-04-14 13:13:12]  workdir=None
[2026-04-14 13:13:12] ]
[2026-04-14 13:13:12] 2026-04-14 11:12:24,722 | INFO     | transferring file log.49263191._069802.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7089335629/log.49263191._069802.job.log.tgz.1 to /var/lib/
[2026-04-14 13:13:12] 2026-04-14 11:12:24,722 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7089335629/log.49263191._069802.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/0/
[2026-04-14 13:13:12] 2026-04-14 11:12:24,737 | INFO     | adding to output.list: log.49263191._069802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/e3/log.49263191._069802.job.log.tg
[2026-04-14 13:13:12] 2026-04-14 11:12:24,737 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-14 13:13:12] 2026-04-14 11:12:24,738 | INFO     | summary of transferred files:
[2026-04-14 13:13:12] 2026-04-14 11:12:24,738 | INFO     |  -- lfn=log.49263191._069802.job.log.tgz.1, status_code=0, status=transferred
[2026-04-14 13:13:12] 2026-04-14 11:12:24,738 | INFO     | stage-out finished correctly
[2026-04-14 13:13:12] 2026-04-14 11:12:26,138 | WARNING  | process 3796391 can no longer be monitored (due to stat problems) - aborting
[2026-04-14 13:13:12] 2026-04-14 11:12:26,138 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7089335629/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 13:13:12] 2026-04-14 11:12:26,485 | INFO     | number of running child processes to parent process 3796391: 1
[2026-04-14 13:13:12] 2026-04-14 11:12:26,486 | INFO     | maximum number of monitored processes: 6
[2026-04-14 13:13:12] 2026-04-14 11:12:28,023 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-14 13:13:12] 2026-04-14 11:12:28,305 | INFO     | job 7089335629 has state=finished
[2026-04-14 13:13:12] 2026-04-14 11:12:28,306 | INFO     | preparing for final server update for job 7089335629 in state='finished'
[2026-04-14 13:13:12] 2026-04-14 11:12:28,306 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7089335629/jobReport.json
[2026-04-14 13:13:12] 2026-04-14 11:12:28,308 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/0/workernode_map.json
[2026-04-14 13:13:12] 2026-04-14 11:12:28,308 | INFO     | this job has now completed (state=finished)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,308 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,308 | INFO     | log transfer has been attempted: DONE
[2026-04-14 13:13:12] 2026-04-14 11:12:28,308 | INFO     | job 7089335629 has finished - writing final server update
[2026-04-14 13:13:12] 2026-04-14 11:12:28,309 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1800862/.job.ad'
[2026-04-14 13:13:12] 2026-04-14 11:12:28,309 | INFO     | total number of processed events: 400 (read)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,326 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7089335629/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,326 | INFO     | extracted standard info from prmon json
[2026-04-14 13:13:12] 2026-04-14 11:12:28,326 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 13:13:12] 2026-04-14 11:12:28,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 13:13:12] 2026-04-14 11:12:28,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 13:13:12] 2026-04-14 11:12:28,327 | INFO     | fitting pss+swap vs Time
[2026-04-14 13:13:12] 2026-04-14 11:12:28,327 | INFO     | sum of square deviations: 2865170.0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,327 | INFO     | sum of deviations: 27196606.0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,327 | INFO     | mean x (centered): 0.0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | mean y: 2697415.8571428573
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | intersect: 2697415.8571428573
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | chi2: 0.0003022353506268181
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | current memory leak: 9.49 B/s (using 21 data points, chi2=0.00)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | could have reported an average CPU frequency of 3621 MHz (4 samples)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | ..............................
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . Timing measurements:
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . get job = 0 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . initial setup = 4 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . payload setup = 6 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . stage-in = 0 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . payload execution = 1679 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . stage-out = 0 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | . log creation = 0 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,328 | INFO     | ..............................
[2026-04-14 13:13:12] 2026-04-14 11:12:28,377 | INFO     | 
[2026-04-14 13:13:12] 2026-04-14 11:12:28,377 | INFO     | job summary report
[2026-04-14 13:13:12] 2026-04-14 11:12:28,377 | INFO     | --------------------------------------------------
[2026-04-14 13:13:12] 2026-04-14 11:12:28,377 | INFO     | PanDA job id: 7089335629
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | task id: 49263191
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | errors: (none)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | pilot state: finished 
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | transexitcode: 0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | exeerrorcode: 0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | exeerrordiag: 
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | exitcode: 0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | exitmsg: OK
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | cpuconsumptiontime: 17649 s
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | nevents: 400
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | neventsw: 0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | pid: 3796391
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | pgrp: 3796391
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | corecount: 12
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | event service: False
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | sizes: {0: 2279064, 1: 2281562, 11: 2281562, 1689: 2306399, 1691: 2315421, 1694: 2315799}
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | --------------------------------------------------
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | 
[2026-04-14 13:13:12] 2026-04-14 11:12:28,378 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/0
[2026-04-14 13:13:12] 2026-04-14 11:12:28,395 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | job 7089335629 has completed (purged errors)
[2026-04-14 13:13:12] 2026-04-14 11:12:28,396 | INFO     | overall cleanup function is called
[2026-04-14 13:13:12] 2026-04-14 11:12:29,404 | INFO     | --- collectZombieJob: --- 10, [3796391]
[2026-04-14 13:13:12] 2026-04-14 11:12:29,404 | INFO     | zombie collector waiting for pid 3796391
[2026-04-14 13:13:12] 2026-04-14 11:12:29,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 13:13:12] 2026-04-14 11:12:29,404 | INFO     | collected zombie processes
[2026-04-14 13:13:12] 2026-04-14 11:12:29,404 | INFO     | will attempt to kill all subprocesses of pid=3796391
[2026-04-14 13:13:12] 2026-04-14 11:12:29,757 | INFO     | process IDs to be killed: [3796391] (in reverse order)
[2026-04-14 13:13:12] 2026-04-14 11:12:29,908 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 13:13:12] 2026-04-14 11:12:29,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 13:13:12] 2026-04-14 11:12:29,933 | INFO     | did not find any defunct processes belonging to 3796391
[2026-04-14 13:13:12] 2026-04-14 11:12:29,956 | INFO     | did not find any defunct processes belonging to 3796391
[2026-04-14 13:13:12] 2026-04-14 11:12:29,956 | INFO     | Ready for new job
[2026-04-14 13:13:12] 2026-04-14 11:12:29,957 | INFO     | **************************************
[2026-04-14 13:13:12] 2026-04-14 11:12:29,958 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 13:13:12] 2026-04-14 11:12:29,958 | INFO     | **************************************
[2026-04-14 13:13:12] 2026-04-14 11:12:29,958 | INFO     | 
[2026-04-14 13:13:12] 2026-04-14 11:12:29,964 | INFO     | architecture information:
[2026-04-14 13:13:12] 2026-04-14 11:12:29,964 | INFO     | executing command: cat /etc/os-release
[2026-04-14 13:13:12] 2026-04-14 11:12:29,977 | INFO     | cat /etc/os-release:
[2026-04-14 13:13:12] NAME="CentOS Linux"
[2026-04-14 13:13:12] VERSION="7 (Core)"
[2026-04-14 13:13:12] ID="centos"
[2026-04-14 13:13:12] ID_LIKE="rhel fedora"
[2026-04-14 13:13:12] VERSION_ID="7"
[2026-04-14 13:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 13:13:12] ANSI_COLOR="0;31"
[2026-04-14 13:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 13:13:12] HOME_URL="https://www.centos.org/"
[2026-04-14 13:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 13:13:12] 
[2026-04-14 13:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 13:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 13:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 13:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 13:13:12] 
[2026-04-14 13:13:12] 2026-04-14 11:12:29,977 | INFO     | **************************************
[2026-04-14 13:13:12] 2026-04-14 11:12:30,480 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/0
[2026-04-14 13:13:12] 2026-04-14 11:12:30,496 | INFO     | sufficient remaining disk space (252958474240 B)
[2026-04-14 13:13:12] 2026-04-14 11:12:30,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 13:13:12] 2026-04-14 11:12:30,496 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 13:13:12] 2026-04-14 11:12:30,496 | INFO     | update_server=False
[2026-04-14 13:13:12] 2026-04-14 11:12:30,496 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 13:13:12] 2026-04-14 11:12:30,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 13:13:12] 2026-04-14 11:12:30,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 13:13:12] 2026-04-14 11:12:30,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 13:13:12] 2026-04-14 11:12:30,498 | INFO     | aborting loop
[2026-04-14 13:13:12] 2026-04-14 11:12:31,014 | INFO     | all job control threads have been joined
[2026-04-14 13:13:12] 2026-04-14 11:12:31,428 | INFO     | all data control threads have been joined
[2026-04-14 13:13:12] 2026-04-14 11:12:31,502 | INFO     | [job] retrieve thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:31,503 | INFO     | [job] job monitor thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:31,604 | INFO     | all payload control threads have been joined
[2026-04-14 13:13:12] 2026-04-14 11:12:31,656 | INFO     | [payload] failed_post thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:31,843 | INFO     | [job] validate thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:31,954 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,019 | INFO     | [job] control thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,026 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,140 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,303 | INFO     | [data] copytool_in thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,431 | INFO     | [data] control thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,502 | INFO     | [data] copytool_out thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,505 | INFO     | [payload] validate_post thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:32,610 | INFO     | [payload] control thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:33,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 13:13:12] 2026-04-14 11:12:34,393 | INFO     | [job] queue monitor thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:34,505 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:12:40,702 | INFO     | job.realtimelogging is not enabled
[2026-04-14 13:13:12] 2026-04-14 11:12:41,707 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 13:13:12] 2026-04-14 11:13:00,208 | INFO     | PID=3777086 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 13:13:12] 2026-04-14 11:13:00,208 | INFO     | .. there are 15 such processes running
[2026-04-14 13:13:12] 2026-04-14 11:13:00,209 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 13:13:12] 2026-04-14 11:13:00,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 13:13:12] 2026-04-14 11:13:00,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 13:13:12] 2026-04-14 11:13:06,003 | INFO     | [monitor] cgroup control has ended
[2026-04-14 13:13:12] 2026-04-14 11:13:07,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22759951824704)>', '<ExcThread(monitor, started 22759716701952)>']
[2026-04-14 13:13:12] 2026-04-14 11:13:08,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 13:13:12] 2026-04-14 11:13:08,248 | INFO     | [monitor] control thread has ended
[2026-04-14 13:13:12] 2026-04-14 11:13:12,481 | INFO     | all workflow threads have been joined
[2026-04-14 13:13:12] 2026-04-14 11:13:12,482 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 13:13:12] 2026-04-14 11:13:12,482 | INFO     | traces error code: 0
[2026-04-14 13:13:12] 2026-04-14 11:13:12,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 13:13:12] 2026-04-14 11:13:12,607 [wrapper] ==== pilot stdout END ====
[2026-04-14 13:13:12] 2026-04-14 11:13:12,610 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 13:13:12] 2026-04-14 11:13:12,613 [wrapper] pilotpid: 3777086
[2026-04-14 13:13:12] 2026-04-14 11:13:12,615 [wrapper] Pilot exit status: 0
[2026-04-14 13:13:12] 2026-04-14 11:13:12,623 [wrapper] pandaids: 7089335629
[2026-04-14 13:13:12] 2026-04-14 11:13:12,728 [wrapper] cleanup supervisor_pilot 3939244 3777087
[2026-04-14 13:13:12] 2026-04-14 11:13:12,731 [wrapper] Test setup, not cleaning
[2026-04-14 13:13:12] 2026-04-14 11:13:12,732 [wrapper] apfmon messages muted
[2026-04-14 13:13:12] 2026-04-14 11:13:12,734 [wrapper] ==== wrapper stdout END ====
[2026-04-14 13:13:12] 2026-04-14 11:13:12,735 [wrapper] ==== wrapper stderr END ====
[2026-04-14 13:13:12]  *** Error codes and diagnostics ***
[2026-04-14 13:13:12]     "exeErrorCode": 0,
[2026-04-14 13:13:12]     "pilotErrorCode": 0,
[2026-04-14 13:13:12]  *** Listing of results directory ***
[2026-04-14 13:13:12] total 411888
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc    644190 Apr 13 10:55 pilot3.tar.gz
[2026-04-14 13:13:12] -rwx------. 1 boinc boinc     36322 Apr 13 10:57 runpilot2-wrapper.sh
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc      5094 Apr 13 11:10 queuedata.json
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc       100 Apr 14 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 13:13:12] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 12:43 run_atlas
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc       105 Apr 14 12:43 job.xml
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc      6628 Apr 14 12:43 init_data.xml
[2026-04-14 13:13:12] -rw-r--r--. 2 boinc boinc 221957990 Apr 14 12:43 EVNT.49263189._001941.pool.root.1
[2026-04-14 13:13:12] -rw-r--r--. 2 boinc boinc     15665 Apr 14 12:43 start_atlas.sh
[2026-04-14 13:13:12] drwxrwx--x. 2 boinc boinc      4096 Apr 14 12:43 shared
[2026-04-14 13:13:12] -rw-r--r--. 2 boinc boinc    656921 Apr 14 12:43 input.tar.gz
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc         0 Apr 14 12:43 boinc_lockfile
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc      2578 Apr 14 12:43 pandaJob.out
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc    997519 Apr 14 12:43 agis_schedconf.cvmfs.json
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc   1511579 Apr 14 12:43 agis_ddmendpoints.agis.ALL.json
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc       444 Apr 14 12:44 workernode_map.json
[2026-04-14 13:13:12] drwx------. 5 boinc boinc      4096 Apr 14 12:44 pilot3
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc 194646097 Apr 14 13:11 HITS.49263191._069802.pool.root.1
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc       488 Apr 14 13:12 boinc_task_state.xml
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc      1024 Apr 14 13:12 memory_monitor_summary.json
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc    345970 Apr 14 13:12 log.49263191._069802.job.log.tgz.1
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc      6378 Apr 14 13:12 heartbeat_new.json
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc      6269 Apr 14 13:12 heartbeat.json
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc        95 Apr 14 13:13 pilot_heartbeat.json
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc        27 Apr 14 13:13 wrapper_checkpoint.txt
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc      4902 Apr 14 13:13 pilotlog.txt
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc      8192 Apr 14 13:13 boinc_mmap_file
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc    205996 Apr 14 13:13 log.49263191._069802.job.log.1
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc       357 Apr 14 13:13 output.list
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc       410 Apr 14 13:13 runtime_log
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc    573440 Apr 14 13:13 result.tar.gz
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc      8845 Apr 14 13:13 runtime_log.err
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc       660 Apr 14 13:13 afeca7fb6f7e.diag
[2026-04-14 13:13:12] -rw-r--r--. 1 boinc boinc     21030 Apr 14 13:13 stderr.txt
[2026-04-14 13:13:12] HITS file was successfully produced:
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc 194646097 Apr 14 13:11 shared/HITS.pool.root.1
[2026-04-14 13:13:12]  *** Contents of shared directory: ***
[2026-04-14 13:13:12] total 408072
[2026-04-14 13:13:12] -rw-r--r--. 2 boinc boinc 221957990 Apr 14 12:43 ATLAS.root_0
[2026-04-14 13:13:12] -rw-r--r--. 2 boinc boinc     15665 Apr 14 12:43 start_atlas.sh
[2026-04-14 13:13:12] -rw-r--r--. 2 boinc boinc    656921 Apr 14 12:43 input.tar.gz
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc 194646097 Apr 14 13:11 HITS.pool.root.1
[2026-04-14 13:13:12] -rw-------. 1 boinc boinc    573440 Apr 14 13:13 result.tar.gz
13:13:13 (3772534): run_atlas exited; CPU time 17698.584008
13:13:13 (3772534): called boinc_finish(0)

</stderr_txt>
]]>

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