Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:19:29 (475025): wrapper (7.7.26015): starting
12:19:29 (475025): wrapper: running run_atlas (--nthreads 12)
[2026-04-14 12:19:29] Arguments: --nthreads 12
[2026-04-14 12:19:29] Threads: 12
[2026-04-14 12:19:29] Checking for CVMFS
[2026-04-14 12:19:29] No cvmfs_config command found, will try listing directly
[2026-04-14 12:19:29] CVMFS is ok
[2026-04-14 12:19:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 12:19:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 12:19:29] Further information can be found at the LHC@home message board.
[2026-04-14 12:19:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 12:19:29] Checking for apptainer binary...
[2026-04-14 12:19:29] which: no apptainer in ((null))
[2026-04-14 12:19:29] apptainer is not installed, using version from CVMFS
[2026-04-14 12:19:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 12:19:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-04-14 12:19:29] apptainer works
[2026-04-14 12:19:29] Set ATHENA_PROC_NUMBER=12
[2026-04-14 12:19:29] Set ATHENA_CORE_NUMBER=12
[2026-04-14 12:19:29] Starting ATLAS job with PandaID=7089228722
[2026-04-14 12:19:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 12:47:48]  *** The last 200 lines of the pilot log: ***
[2026-04-14 12:47:48]  filesize=330119
[2026-04-14 12:47:48]  filetype=log
[2026-04-14 12:47:48]  guid=97f9e934-2c36-48e5-b7fa-40982483a5df
[2026-04-14 12:47:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-14 12:47:48]  is_altstaged=None
[2026-04-14 12:47:48]  is_tar=False
[2026-04-14 12:47:48]  lfn=log.49263191._068967.job.log.tgz.1
[2026-04-14 12:47:48]  mtime=0
[2026-04-14 12:47:48]  protocol_id=None
[2026-04-14 12:47:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-14 12:47:48]  replicas=None
[2026-04-14 12:47:48]  scope=mc23_13p6TeV
[2026-04-14 12:47:48]  status=None
[2026-04-14 12:47:48]  status_code=0
[2026-04-14 12:47:48]  storage_token=
[2026-04-14 12:47:48]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7089228722/log.49263191._068967.job.log.tgz.1
[2026-04-14 12:47:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/30/log.49263191._068967.job.log.tgz.1
[2026-04-14 12:47:48]  workdir=None
[2026-04-14 12:47:48] ]
[2026-04-14 12:47:48] 2026-04-14 10:46:43,860 | INFO     | transferring file log.49263191._068967.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7089228722/log.49263191._068967.job.log.tgz.1 to /var/lib/
[2026-04-14 12:47:48] 2026-04-14 10:46:43,860 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7089228722/log.49263191._068967.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-04-14 12:47:48] 2026-04-14 10:46:43,874 | INFO     | PID=481663 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 12:47:48] 2026-04-14 10:46:43,874 | INFO     | .. there are 14 such processes running
[2026-04-14 12:47:48] 2026-04-14 10:46:43,874 | INFO     | adding to output.list: log.49263191._068967.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/30/log.49263191._068967.job.log.tg
[2026-04-14 12:47:48] 2026-04-14 10:46:43,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-14 12:47:48] 2026-04-14 10:46:43,875 | INFO     | summary of transferred files:
[2026-04-14 12:47:48] 2026-04-14 10:46:43,875 | INFO     |  -- lfn=log.49263191._068967.job.log.tgz.1, status_code=0, status=transferred
[2026-04-14 12:47:48] 2026-04-14 10:46:43,875 | INFO     | stage-out finished correctly
[2026-04-14 12:47:48] 2026-04-14 10:46:43,922 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-14 12:47:48] 2026-04-14 10:46:44,403 | INFO     | monitor loop #124: job 0:7089228722 is in state 'finished'
[2026-04-14 12:47:48] 2026-04-14 10:46:44,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,833 | INFO     | job 7089228722 has state=finished
[2026-04-14 12:47:48] 2026-04-14 10:46:44,833 | INFO     | preparing for final server update for job 7089228722 in state='finished'
[2026-04-14 12:47:48] 2026-04-14 10:46:44,833 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7089228722/jobReport.json
[2026-04-14 12:47:48] 2026-04-14 10:46:44,835 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-04-14 12:47:48] 2026-04-14 10:46:44,835 | INFO     | this job has now completed (state=finished)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,835 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,835 | INFO     | log transfer has been attempted: DONE
[2026-04-14 12:47:48] 2026-04-14 10:46:44,835 | INFO     | job 7089228722 has finished - writing final server update
[2026-04-14 12:47:48] 2026-04-14 10:46:44,836 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1594360/.job.ad'
[2026-04-14 12:47:48] 2026-04-14 10:46:44,836 | INFO     | total number of processed events: 400 (read)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,853 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7089228722/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,854 | INFO     | extracted standard info from prmon json
[2026-04-14 12:47:48] 2026-04-14 10:46:44,854 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 12:47:48] 2026-04-14 10:46:44,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 12:47:48] 2026-04-14 10:46:44,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 12:47:48] 2026-04-14 10:46:44,854 | INFO     | fitting pss+swap vs Time
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | sum of square deviations: 2474465.0
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | sum of deviations: -17630403.000000004
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | mean x (centered): 0.0
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | mean y: 2729650.6
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | intersect: 2729650.6
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | chi2: 7.294895769894251e-05
[2026-04-14 12:47:48] 2026-04-14 10:46:44,855 | INFO     | current memory leak: -7.12 B/s (using 20 data points, chi2=0.00)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | could have reported an average CPU frequency of 3601 MHz (4 samples)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | ..............................
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . Timing measurements:
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . get job = 0 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . initial setup = 4 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . payload setup = 5 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . stage-in = 0 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . payload execution = 1601 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . stage-out = 0 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | . log creation = 0 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,856 | INFO     | ..............................
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | 
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | job summary report
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | --------------------------------------------------
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | PanDA job id: 7089228722
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | task id: 49263191
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | errors: (none)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | pilot state: finished 
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | transexitcode: 0
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | exeerrorcode: 0
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | exeerrordiag: 
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | exitcode: 0
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | exitmsg: OK
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | cpuconsumptiontime: 16764 s
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | nevents: 400
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | neventsw: 0
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | pid: 494579
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | pgrp: 494579
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | corecount: 12
[2026-04-14 12:47:48] 2026-04-14 10:46:44,908 | INFO     | event service: False
[2026-04-14 12:47:48] 2026-04-14 10:46:44,909 | INFO     | sizes: {0: 2279904, 1: 2281534, 11: 2281562, 1610: 2306375, 1611: 2306374, 1613: 2315636, 1614: 2315774}
[2026-04-14 12:47:48] 2026-04-14 10:46:44,909 | INFO     | --------------------------------------------------
[2026-04-14 12:47:48] 2026-04-14 10:46:44,909 | INFO     | 
[2026-04-14 12:47:48] 2026-04-14 10:46:44,909 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-04-14 12:47:48] 2026-04-14 10:46:44,930 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,930 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | job 7089228722 has completed (purged errors)
[2026-04-14 12:47:48] 2026-04-14 10:46:44,931 | INFO     | overall cleanup function is called
[2026-04-14 12:47:48] 2026-04-14 10:46:45,939 | INFO     | --- collectZombieJob: --- 10, [494579]
[2026-04-14 12:47:48] 2026-04-14 10:46:45,939 | INFO     | zombie collector waiting for pid 494579
[2026-04-14 12:47:48] 2026-04-14 10:46:45,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 12:47:48] 2026-04-14 10:46:45,939 | INFO     | collected zombie processes
[2026-04-14 12:47:48] 2026-04-14 10:46:45,939 | INFO     | will attempt to kill all subprocesses of pid=494579
[2026-04-14 12:47:48] 2026-04-14 10:46:46,300 | INFO     | process IDs to be killed: [494579] (in reverse order)
[2026-04-14 12:47:48] 2026-04-14 10:46:46,452 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 12:47:48] 2026-04-14 10:46:46,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 12:47:48] 2026-04-14 10:46:46,477 | INFO     | did not find any defunct processes belonging to 494579
[2026-04-14 12:47:48] 2026-04-14 10:46:46,500 | INFO     | did not find any defunct processes belonging to 494579
[2026-04-14 12:47:48] 2026-04-14 10:46:46,500 | INFO     | Ready for new job
[2026-04-14 12:47:48] 2026-04-14 10:46:46,501 | INFO     | **************************************
[2026-04-14 12:47:48] 2026-04-14 10:46:46,502 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 12:47:48] 2026-04-14 10:46:46,502 | INFO     | **************************************
[2026-04-14 12:47:48] 2026-04-14 10:46:46,502 | INFO     | 
[2026-04-14 12:47:48] 2026-04-14 10:46:46,507 | INFO     | architecture information:
[2026-04-14 12:47:48] 2026-04-14 10:46:46,507 | INFO     | executing command: cat /etc/os-release
[2026-04-14 12:47:48] 2026-04-14 10:46:46,523 | INFO     | cat /etc/os-release:
[2026-04-14 12:47:48] NAME="CentOS Linux"
[2026-04-14 12:47:48] VERSION="7 (Core)"
[2026-04-14 12:47:48] ID="centos"
[2026-04-14 12:47:48] ID_LIKE="rhel fedora"
[2026-04-14 12:47:48] VERSION_ID="7"
[2026-04-14 12:47:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 12:47:48] ANSI_COLOR="0;31"
[2026-04-14 12:47:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 12:47:48] HOME_URL="https://www.centos.org/"
[2026-04-14 12:47:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 12:47:48] 
[2026-04-14 12:47:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 12:47:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 12:47:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 12:47:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 12:47:48] 
[2026-04-14 12:47:48] 2026-04-14 10:46:46,523 | INFO     | **************************************
[2026-04-14 12:47:48] 2026-04-14 10:46:47,026 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-14 12:47:48] 2026-04-14 10:46:47,038 | INFO     | sufficient remaining disk space (247591862272 B)
[2026-04-14 12:47:48] 2026-04-14 10:46:47,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 12:47:48] 2026-04-14 10:46:47,039 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 12:47:48] 2026-04-14 10:46:47,039 | INFO     | update_server=False
[2026-04-14 12:47:48] 2026-04-14 10:46:47,039 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 12:47:48] 2026-04-14 10:46:47,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 12:47:48] 2026-04-14 10:46:47,166 | INFO     | all job control threads have been joined
[2026-04-14 12:47:48] 2026-04-14 10:46:47,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 12:47:48] 2026-04-14 10:46:47,907 | INFO     | aborting loop
[2026-04-14 12:47:48] 2026-04-14 10:46:48,044 | INFO     | [job] retrieve thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:48,062 | INFO     | [payload] failed_post thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:48,138 | INFO     | all payload control threads have been joined
[2026-04-14 12:47:48] 2026-04-14 10:46:48,139 | INFO     | all data control threads have been joined
[2026-04-14 12:47:48] 2026-04-14 10:46:48,171 | INFO     | [job] control thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:48,797 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:48,912 | INFO     | [job] job monitor thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:48,933 | INFO     | [job] validate thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:48,957 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,044 | INFO     | [data] copytool_out thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,097 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,139 | INFO     | [data] control thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,144 | INFO     | [payload] control thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,169 | INFO     | [data] copytool_in thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,245 | INFO     | [payload] validate_post thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:49,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 12:47:48] 2026-04-14 10:46:49,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 12:47:48] 2026-04-14 10:46:50,921 | INFO     | [job] queue monitor thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:53,980 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:46:57,306 | INFO     | job.realtimelogging is not enabled
[2026-04-14 12:47:48] 2026-04-14 10:46:58,311 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 12:47:48] 2026-04-14 10:47:18,452 | INFO     | PID=481663 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-14 12:47:48] 2026-04-14 10:47:18,452 | INFO     | .. there are 14 such processes running
[2026-04-14 12:47:48] 2026-04-14 10:47:18,453 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 12:47:48] 2026-04-14 10:47:18,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 12:47:48] 2026-04-14 10:47:18,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 12:47:48] 2026-04-14 10:47:42,145 | INFO     | [monitor] cgroup control has ended
[2026-04-14 12:47:48] 2026-04-14 10:47:43,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23052059080512)>', '<ExcThread(monitor, started 23051747956480)>']
[2026-04-14 12:47:48] 2026-04-14 10:47:43,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 12:47:48] 2026-04-14 10:47:43,579 | INFO     | [monitor] control thread has ended
[2026-04-14 12:47:48] 2026-04-14 10:47:48,358 | INFO     | all workflow threads have been joined
[2026-04-14 12:47:48] 2026-04-14 10:47:48,358 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 12:47:48] 2026-04-14 10:47:48,358 | INFO     | traces error code: 0
[2026-04-14 12:47:48] 2026-04-14 10:47:48,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 12:47:48] 2026-04-14 10:47:48,522 [wrapper] ==== pilot stdout END ====
[2026-04-14 12:47:48] 2026-04-14 10:47:48,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 12:47:48] 2026-04-14 10:47:48,528 [wrapper] pilotpid: 481663
[2026-04-14 12:47:48] 2026-04-14 10:47:48,531 [wrapper] Pilot exit status: 0
[2026-04-14 12:47:48] 2026-04-14 10:47:48,540 [wrapper] pandaids: 7089228722
[2026-04-14 12:47:48] 2026-04-14 10:47:48,644 [wrapper] cleanup supervisor_pilot  619888 481664
[2026-04-14 12:47:48] 2026-04-14 10:47:48,647 [wrapper] Test setup, not cleaning
[2026-04-14 12:47:48] 2026-04-14 10:47:48,650 [wrapper] apfmon messages muted
[2026-04-14 12:47:48] 2026-04-14 10:47:48,652 [wrapper] ==== wrapper stdout END ====
[2026-04-14 12:47:48] 2026-04-14 10:47:48,655 [wrapper] ==== wrapper stderr END ====
[2026-04-14 12:47:48]  *** Error codes and diagnostics ***
[2026-04-14 12:47:48]     "exeErrorCode": 0,
[2026-04-14 12:47:48]     "pilotErrorCode": 0,
[2026-04-14 12:47:48]  *** Listing of results directory ***
[2026-04-14 12:47:48] total 411572
[2026-04-14 12:47:48] -rwx------. 1 boinc boinc     36322 Apr 13 10:52 runpilot2-wrapper.sh
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc      5094 Apr 13 10:55 queuedata.json
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc    644190 Apr 13 10:55 pilot3.tar.gz
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc       100 Apr 14 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 12:47:48] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 12:19 run_atlas
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc       105 Apr 14 12:19 job.xml
[2026-04-14 12:47:48] -rw-r--r--. 2 boinc boinc 224898687 Apr 14 12:19 EVNT.49263189._001909.pool.root.1
[2026-04-14 12:47:48] -rw-r--r--. 2 boinc boinc     15665 Apr 14 12:19 start_atlas.sh
[2026-04-14 12:47:48] drwxrwx--x. 2 boinc boinc      4096 Apr 14 12:19 shared
[2026-04-14 12:47:48] -rw-r--r--. 2 boinc boinc    656927 Apr 14 12:19 input.tar.gz
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc      6628 Apr 14 12:19 init_data.xml
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc         0 Apr 14 12:19 boinc_lockfile
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc      2578 Apr 14 12:19 pandaJob.out
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc    997519 Apr 14 12:19 agis_schedconf.cvmfs.json
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc   1511579 Apr 14 12:19 agis_ddmendpoints.agis.ALL.json
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc       445 Apr 14 12:19 workernode_map.json
[2026-04-14 12:47:48] drwx------. 5 boinc boinc      4096 Apr 14 12:19 pilot3
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc 191436136 Apr 14 12:46 HITS.49263191._068967.pool.root.1
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc       487 Apr 14 12:46 boinc_task_state.xml
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc      1028 Apr 14 12:46 memory_monitor_summary.json
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc    330119 Apr 14 12:46 log.49263191._068967.job.log.tgz.1
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc      6379 Apr 14 12:46 heartbeat_new.json
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc      6270 Apr 14 12:46 heartbeat.json
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc        95 Apr 14 12:47 pilot_heartbeat.json
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc        27 Apr 14 12:47 wrapper_checkpoint.txt
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc      8192 Apr 14 12:47 boinc_mmap_file
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc      4901 Apr 14 12:47 pilotlog.txt
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc    198859 Apr 14 12:47 log.49263191._068967.job.log.1
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc       357 Apr 14 12:47 output.list
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc       410 Apr 14 12:47 runtime_log
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc    542720 Apr 14 12:47 result.tar.gz
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc      8845 Apr 14 12:47 runtime_log.err
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc       655 Apr 14 12:47 aece4ff4bd80.diag
[2026-04-14 12:47:48] -rw-r--r--. 1 boinc boinc     21071 Apr 14 12:47 stderr.txt
[2026-04-14 12:47:48] HITS file was successfully produced:
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc 191436136 Apr 14 12:46 shared/HITS.pool.root.1
[2026-04-14 12:47:48]  *** Contents of shared directory: ***
[2026-04-14 12:47:48] total 407780
[2026-04-14 12:47:48] -rw-r--r--. 2 boinc boinc 224898687 Apr 14 12:19 ATLAS.root_0
[2026-04-14 12:47:48] -rw-r--r--. 2 boinc boinc     15665 Apr 14 12:19 start_atlas.sh
[2026-04-14 12:47:48] -rw-r--r--. 2 boinc boinc    656927 Apr 14 12:19 input.tar.gz
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc 191436136 Apr 14 12:46 HITS.pool.root.1
[2026-04-14 12:47:48] -rw-------. 1 boinc boinc    542720 Apr 14 12:47 result.tar.gz
12:47:50 (475025): run_atlas exited; CPU time 16814.756151
12:47:50 (475025): called boinc_finish(0)

</stderr_txt>
]]>

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