Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:41:07 (3799952): wrapper (7.7.26015): starting
10:41:07 (3799952): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 10:41:07] Arguments: --nthreads 8
[2026-04-13 10:41:07] Threads: 8
[2026-04-13 10:41:07] Checking for CVMFS
[2026-04-13 10:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 10:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 10:41:08] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 10:41:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 10:41:10] 2.13.3.0 11772 228857 252392 158419 1 521 19933328 32935937 41626 16776704 0 1242747045 99.586 1435894314 34950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 10:41:10] CVMFS is ok
[2026-04-13 10:41:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 10:41:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 10:41:10] Further information can be found at the LHC@home message board.
[2026-04-13 10:41:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 10:41:10] Checking for apptainer binary...
[2026-04-13 10:41:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 10:41:10] Running /usr/bin/apptainer --version
[2026-04-13 10:41:11] apptainer version 1.4.5-2.el9
[2026-04-13 10:41:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 10:41:11] c7-3-28.aglt2.org
[2026-04-13 10:41:11] apptainer works
[2026-04-13 10:41:11] Set ATHENA_PROC_NUMBER=8
[2026-04-13 10:41:11] Set ATHENA_CORE_NUMBER=8
[2026-04-13 10:41:12] Starting ATLAS job with PandaID=7089443099
[2026-04-13 10:41:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 14:11:39]  *** The last 200 lines of the pilot log: ***
[2026-04-13 14:11:39] 2026-04-13 18:10:31,343 | INFO     | total number of processed events: 400 (read)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7089443099/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,401 | INFO     | extracted standard info from prmon json
[2026-04-13 14:11:39] 2026-04-13 18:10:31,405 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 14:11:39] 2026-04-13 18:10:31,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 14:11:39] 2026-04-13 18:10:31,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 14:11:39] 2026-04-13 18:10:31,409 | INFO     | fitting pss+swap vs Time
[2026-04-13 14:11:39] 2026-04-13 18:10:31,413 | INFO     | sum of square deviations: 2555798481.3861365
[2026-04-13 14:11:39] 2026-04-13 18:10:31,414 | INFO     | sum of deviations: 87275119288.79205
[2026-04-13 14:11:39] 2026-04-13 18:10:31,414 | INFO     | mean x (centered): 0.0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,414 | INFO     | mean y: 2422693.113861386
[2026-04-13 14:11:39] 2026-04-13 18:10:31,415 | INFO     | intersect: 2422693.113861386
[2026-04-13 14:11:39] 2026-04-13 18:10:31,415 | INFO     | chi2: 3.8313608136695634
[2026-04-13 14:11:39] 2026-04-13 18:10:31,419 | INFO     | sum of square deviations: 2370674003.857868
[2026-04-13 14:11:39] 2026-04-13 18:10:31,420 | INFO     | sum of deviations: 84637990214.63965
[2026-04-13 14:11:39] 2026-04-13 18:10:31,420 | INFO     | mean x (centered): 0.0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,420 | INFO     | mean y: 2420520.157360406
[2026-04-13 14:11:39] 2026-04-13 18:10:31,420 | INFO     | intersect: 2420520.157360406
[2026-04-13 14:11:39] 2026-04-13 18:10:31,421 | INFO     | chi2: 3.8343769649019412
[2026-04-13 14:11:39] 2026-04-13 18:10:31,421 | INFO     | current chi2=3.8343769649019412 (change=-0.0787227144365211 %)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,421 | INFO     | right removable region: 196
[2026-04-13 14:11:39] 2026-04-13 18:10:31,421 | INFO     | sum of square deviations: 2370664853.857868
[2026-04-13 14:11:39] 2026-04-13 18:10:31,422 | INFO     | sum of deviations: 28869737450.609127
[2026-04-13 14:11:39] 2026-04-13 18:10:31,422 | INFO     | mean x (centered): 0.0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,423 | INFO     | mean y: 2470681.959390863
[2026-04-13 14:11:39] 2026-04-13 18:10:31,423 | INFO     | intersect: 2470681.959390863
[2026-04-13 14:11:39] 2026-04-13 18:10:31,425 | INFO     | chi2: 0.4631536755610243
[2026-04-13 14:11:39] 2026-04-13 18:10:31,425 | INFO     | current chi2=0.4631536755610243 (change=87.91150982417055 %)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,426 | INFO     | sum of square deviations: 2194694188.828125
[2026-04-13 14:11:39] 2026-04-13 18:10:31,427 | INFO     | sum of deviations: 10719579601.437502
[2026-04-13 14:11:39] 2026-04-13 18:10:31,427 | INFO     | mean x (centered): 0.0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,427 | INFO     | mean y: 2486295.1041666665
[2026-04-13 14:11:39] 2026-04-13 18:10:31,427 | INFO     | intersect: 2486295.1041666665
[2026-04-13 14:11:39] 2026-04-13 18:10:31,427 | INFO     | chi2: 0.08305191206943968
[2026-04-13 14:11:39] 2026-04-13 18:10:31,427 | INFO     | current chi2=0.08305191206943968 (change=82.06817381534589 %)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,428 | INFO     | sum of square deviations: 2027665756.9518752
[2026-04-13 14:11:39] 2026-04-13 18:10:31,433 | INFO     | sum of deviations: 6315477053.55615
[2026-04-13 14:11:39] 2026-04-13 18:10:31,433 | INFO     | mean x (centered): 0.0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,433 | INFO     | mean y: 2490290.245989305
[2026-04-13 14:11:39] 2026-04-13 18:10:31,433 | INFO     | intersect: 2490290.245989305
[2026-04-13 14:11:39] 2026-04-13 18:10:31,433 | INFO     | chi2: 0.06423473796255673
[2026-04-13 14:11:39] 2026-04-13 18:10:31,433 | INFO     | current chi2=0.06423473796255673 (change=22.65712328350721 %)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,434 | INFO     | left removable region: 15
[2026-04-13 14:11:39] 2026-04-13 18:10:31,434 | INFO     | sum of square deviations: 1838688732.917129
[2026-04-13 14:11:39] 2026-04-13 18:10:31,435 | INFO     | sum of deviations: 5684887987.320441
[2026-04-13 14:11:39] 2026-04-13 18:10:31,435 | INFO     | mean x (centered): 0.0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,435 | INFO     | mean y: 2489678.8342541438
[2026-04-13 14:11:39] 2026-04-13 18:10:31,435 | INFO     | intersect: 2489678.8342541438
[2026-04-13 14:11:39] 2026-04-13 18:10:31,435 | INFO     | chi2: 0.06422766930382892
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | current memory leak: 3.09 B/s (using 181 data points, chi2=0.06)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | could have reported an average CPU frequency of 3040 MHz (10 samples)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | ..............................
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | . Timing measurements:
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | . get job = 0 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | . initial setup = 38 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,436 | INFO     | . payload setup = 100 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,437 | INFO     | . stage-in = 0 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,437 | INFO     | . payload execution = 12316 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,449 | INFO     | . stage-out = 2 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,449 | INFO     | . log creation = 0 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,449 | INFO     | ..............................
[2026-04-13 14:11:39] 2026-04-13 18:10:31,596 | INFO     | 
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | job summary report
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | --------------------------------------------------
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | PanDA job id: 7089443099
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | task id: 49263191
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | errors: (none)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | pilot state: finished 
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | transexitcode: 0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | exeerrorcode: 0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | exeerrordiag: 
[2026-04-13 14:11:39] 2026-04-13 18:10:31,597 | INFO     | exitcode: 0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | exitmsg: OK
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | cpuconsumptiontime: 35617 s
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | nevents: 400
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | neventsw: 0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | pid: 3836251
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | pgrp: 3836251
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | corecount: 8
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | event service: False
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | sizes: {0: 2279665, 1: 2279749, 2: 2254706, 3: 2281606, 14: 2281606, 12420: 2311606, 12423: 2320604, 12424: 2320660, 12425: 2320854}
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | --------------------------------------------------
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | 
[2026-04-13 14:11:39] 2026-04-13 18:10:31,598 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 14:11:39] 2026-04-13 18:10:31,637 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,638 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,638 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | job 7089443099 has completed (purged errors)
[2026-04-13 14:11:39] 2026-04-13 18:10:31,640 | INFO     | overall cleanup function is called
[2026-04-13 14:11:39] 2026-04-13 18:10:31,768 | WARNING  | process 3836251 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 14:11:39] 2026-04-13 18:10:32,461 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 14:11:39] 2026-04-13 18:10:32,653 | INFO     | --- collectZombieJob: --- 10, [3836251]
[2026-04-13 14:11:39] 2026-04-13 18:10:32,653 | INFO     | zombie collector waiting for pid 3836251
[2026-04-13 14:11:39] 2026-04-13 18:10:32,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 14:11:39] 2026-04-13 18:10:32,654 | INFO     | collected zombie processes
[2026-04-13 14:11:39] 2026-04-13 18:10:32,654 | INFO     | will attempt to kill all subprocesses of pid=3836251
[2026-04-13 14:11:39] 2026-04-13 18:10:34,615 | INFO     | number of running child processes to parent process 3836251: 1
[2026-04-13 14:11:39] 2026-04-13 18:10:34,615 | INFO     | maximum number of monitored processes: 6
[2026-04-13 14:11:39] 2026-04-13 18:10:34,615 | INFO     | aborting job monitoring since job object (job id=7089443099) has expired
[2026-04-13 14:11:39] 2026-04-13 18:10:34,671 | INFO     | process IDs to be killed: [3836251] (in reverse order)
[2026-04-13 14:11:39] 2026-04-13 18:10:34,917 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 14:11:39] 2026-04-13 18:10:34,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 14:11:39] 2026-04-13 18:10:34,970 | INFO     | did not find any defunct processes belonging to 3836251
[2026-04-13 14:11:39] 2026-04-13 18:10:34,995 | INFO     | did not find any defunct processes belonging to 3836251
[2026-04-13 14:11:39] 2026-04-13 18:10:34,995 | INFO     | Ready for new job
[2026-04-13 14:11:39] 2026-04-13 18:10:35,004 | INFO     | **************************************
[2026-04-13 14:11:39] 2026-04-13 18:10:35,005 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 14:11:39] 2026-04-13 18:10:35,005 | INFO     | **************************************
[2026-04-13 14:11:39] 2026-04-13 18:10:35,005 | INFO     | 
[2026-04-13 14:11:39] 2026-04-13 18:10:35,028 | INFO     | architecture information:
[2026-04-13 14:11:39] 2026-04-13 18:10:35,055 | INFO     | executing command: cat /etc/os-release
[2026-04-13 14:11:39] 2026-04-13 18:10:35,146 | INFO     | cat /etc/os-release:
[2026-04-13 14:11:39] NAME="CentOS Linux"
[2026-04-13 14:11:39] VERSION="7 (Core)"
[2026-04-13 14:11:39] ID="centos"
[2026-04-13 14:11:39] ID_LIKE="rhel fedora"
[2026-04-13 14:11:39] VERSION_ID="7"
[2026-04-13 14:11:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 14:11:39] ANSI_COLOR="0;31"
[2026-04-13 14:11:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 14:11:39] HOME_URL="https://www.centos.org/"
[2026-04-13 14:11:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 14:11:39] 
[2026-04-13 14:11:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 14:11:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 14:11:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 14:11:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 14:11:39] 
[2026-04-13 14:11:39] 2026-04-13 18:10:35,146 | INFO     | **************************************
[2026-04-13 14:11:39] 2026-04-13 18:10:35,650 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 14:11:39] 2026-04-13 18:10:35,708 | INFO     | sufficient remaining disk space (74143760384 B)
[2026-04-13 14:11:39] 2026-04-13 18:10:35,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 14:11:39] 2026-04-13 18:10:35,709 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 14:11:39] 2026-04-13 18:10:35,709 | INFO     | update_server=False
[2026-04-13 14:11:39] 2026-04-13 18:10:35,709 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 14:11:39] 2026-04-13 18:10:35,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 14:11:39] 2026-04-13 18:10:35,710 | INFO     | aborting loop
[2026-04-13 14:11:39] 2026-04-13 18:10:35,990 | INFO     | all data control threads have been joined
[2026-04-13 14:11:39] 2026-04-13 18:10:36,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 14:11:39] 2026-04-13 18:10:36,318 | INFO     | all job control threads have been joined
[2026-04-13 14:11:39] 2026-04-13 18:10:36,514 | INFO     | all payload control threads have been joined
[2026-04-13 14:11:39] 2026-04-13 18:10:36,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 14:11:39] 2026-04-13 18:10:36,715 | INFO     | [job] retrieve thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:36,738 | INFO     | [job] job monitor thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:36,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 14:11:39] 2026-04-13 18:10:36,888 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:36,996 | INFO     | [data] control thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,325 | INFO     | [job] control thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,454 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,507 | INFO     | [data] copytool_in thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,520 | INFO     | [payload] control thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,628 | INFO     | [job] queue monitor thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,836 | INFO     | [job] validate thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,844 | INFO     | [payload] validate_post thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,914 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,967 | INFO     | [payload] failed_post thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:37,975 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:38,050 | INFO     | [data] copytool_out thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:10:40,878 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 14:11:39] 2026-04-13 18:11:04,303 | INFO     | PID=3810036 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-13 14:11:39] 2026-04-13 18:11:04,303 | INFO     | .. there are 42 such processes running
[2026-04-13 14:11:39] 2026-04-13 18:11:04,303 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 14:11:39] 2026-04-13 18:11:04,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 14:11:39] 2026-04-13 18:11:04,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 14:11:39] 2026-04-13 18:11:33,517 | INFO     | [monitor] cgroup control has ended
[2026-04-13 14:11:39] 2026-04-13 18:11:34,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044524324672)>', '<ExcThread(monitor, started 140044002105088)>']
[2026-04-13 14:11:39] 2026-04-13 18:11:34,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 14:11:39] 2026-04-13 18:11:34,508 | INFO     | [monitor] control thread has ended
[2026-04-13 14:11:39] 2026-04-13 18:11:39,210 | INFO     | all workflow threads have been joined
[2026-04-13 14:11:39] 2026-04-13 18:11:39,210 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 14:11:39] 2026-04-13 18:11:39,210 | INFO     | traces error code: 0
[2026-04-13 14:11:39] 2026-04-13 18:11:39,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 14:11:39] 2026-04-13 18:11:39,467 [wrapper] ==== pilot stdout END ====
[2026-04-13 14:11:39] 2026-04-13 18:11:39,471 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 14:11:39] 2026-04-13 18:11:39,476 [wrapper] pilotpid: 3810036
[2026-04-13 14:11:39] 2026-04-13 18:11:39,485 [wrapper] Pilot exit status: 0
[2026-04-13 14:11:39] 2026-04-13 18:11:39,512 [wrapper] pandaids: 7089443099
[2026-04-13 14:11:39] 2026-04-13 18:11:39,661 [wrapper] cleanup supervisor_pilot  435755 3810037
[2026-04-13 14:11:39] 2026-04-13 18:11:39,665 [wrapper] Test setup, not cleaning
[2026-04-13 14:11:39] 2026-04-13 18:11:39,667 [wrapper] apfmon messages muted
[2026-04-13 14:11:39] 2026-04-13 18:11:39,670 [wrapper] ==== wrapper stdout END ====
[2026-04-13 14:11:39] 2026-04-13 18:11:39,673 [wrapper] ==== wrapper stderr END ====
[2026-04-13 14:11:39]  *** Error codes and diagnostics ***
[2026-04-13 14:11:39]     "exeErrorCode": 0,
[2026-04-13 14:11:39]     "pilotErrorCode": 0,
[2026-04-13 14:11:39]  *** Listing of results directory ***
[2026-04-13 14:11:39] total 417716
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 07:14 queuedata.json
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 07:14 pilot3.tar.gz
[2026-04-13 14:11:39] -rwx------. 1 boincer umatlas     36322 Apr 13 07:15 runpilot2-wrapper.sh
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas       100 Apr 13 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 14:11:39] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 10:41 run_atlas
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas       105 Apr 13 10:41 job.xml
[2026-04-13 14:11:39] -rw-r--r--. 2 boincer umatlas 223146553 Apr 13 10:41 EVNT.49263189._001996.pool.root.1
[2026-04-13 14:11:39] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 10:41 start_atlas.sh
[2026-04-13 14:11:39] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 10:41 shared
[2026-04-13 14:11:39] -rw-r--r--. 2 boincer umatlas    656925 Apr 13 10:41 input.tar.gz
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas         0 Apr 13 10:41 boinc_lockfile
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 10:41 pandaJob.out
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas        57 Apr 13 10:41 setup.sh.local
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas    997470 Apr 13 10:42 agis_schedconf.cvmfs.json
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas       429 Apr 13 10:43 workernode_map.json
[2026-04-13 14:11:39] drwx------. 5 boincer umatlas      4096 Apr 13 10:43 pilot3
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas      6861 Apr 13 14:01 init_data.xml
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas 197758800 Apr 13 14:09 HITS.49263191._071207.pool.root.1
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas       488 Apr 13 14:09 boinc_task_state.xml
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas      1046 Apr 13 14:10 memory_monitor_summary.json
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas        95 Apr 13 14:10 pilot_heartbeat.json
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas   1511579 Apr 13 14:10 agis_ddmendpoints.agis.ALL.json
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas    380639 Apr 13 14:10 log.49263191._071207.job.log.tgz.1
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas      6379 Apr 13 14:10 heartbeat_new.json
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas      6270 Apr 13 14:10 heartbeat.json
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 14:11 boinc_mmap_file
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas        28 Apr 13 14:11 wrapper_checkpoint.txt
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas      4820 Apr 13 14:11 pilotlog.txt
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas   1005196 Apr 13 14:11 log.49263191._071207.job.log.1
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas       357 Apr 13 14:11 output.list
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas       410 Apr 13 14:11 runtime_log
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas   1402880 Apr 13 14:11 result.tar.gz
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas      8959 Apr 13 14:11 runtime_log.err
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas       660 Apr 13 14:11 d0517d0a2c60.diag
[2026-04-13 14:11:39] -rw-r--r--. 1 boincer umatlas     21115 Apr 13 14:11 stderr.txt
[2026-04-13 14:11:39] HITS file was successfully produced:
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas 197758800 Apr 13 14:09 shared/HITS.pool.root.1
[2026-04-13 14:11:39]  *** Contents of shared directory: ***
[2026-04-13 14:11:39] total 413084
[2026-04-13 14:11:39] -rw-r--r--. 2 boincer umatlas 223146553 Apr 13 10:41 ATLAS.root_0
[2026-04-13 14:11:39] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 10:41 start_atlas.sh
[2026-04-13 14:11:39] -rw-r--r--. 2 boincer umatlas    656925 Apr 13 10:41 input.tar.gz
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas 197758800 Apr 13 14:09 HITS.pool.root.1
[2026-04-13 14:11:39] -rw-------. 1 boincer umatlas   1402880 Apr 13 14:11 result.tar.gz
14:12:01 (3799952): run_atlas exited; CPU time 36239.110686
14:12:01 (3799952): called boinc_finish(0)

</stderr_txt>
]]>

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