Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:47 (27219): wrapper (7.7.26015): starting
02:04:47 (27219): wrapper: running run_atlas (--nthreads 8)
[2026-04-14 02:04:47] Arguments: --nthreads 8
[2026-04-14 02:04:47] Threads: 8
[2026-04-14 02:04:47] Checking for CVMFS
[2026-04-14 02:04:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 02:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 02:04:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 02:04:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 02:04:54] 2.11.2.0 19099 17917 100312 158433 1 54 14366269 25165825 96 130560 0 6822031 99.840 3921687 7944 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-14 02:04:54] CVMFS is ok
[2026-04-14 02:04:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 02:04:54] Checking for apptainer binary...
[2026-04-14 02:04:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 02:04:54] Running /usr/bin/apptainer --version
[2026-04-14 02:04:54] apptainer version 1.3.2-1.el7
[2026-04-14 02:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 02:04:57] cg-vwn483.simple-grid.lan
[2026-04-14 02:04:57] apptainer works
[2026-04-14 02:04:57] Set ATHENA_PROC_NUMBER=8
[2026-04-14 02:04:57] Set ATHENA_CORE_NUMBER=8
[2026-04-14 02:04:58] Starting ATLAS job with PandaID=7089442405
[2026-04-14 02:04:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 06:35:51]  *** The last 200 lines of the pilot log: ***
[2026-04-14 06:35:51] 2026-04-14 04:34:58,208 | INFO     | this job has now completed (state=finished)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,208 | INFO     | log transfer has been attempted: DONE
[2026-04-14 06:35:51] 2026-04-14 04:34:58,208 | INFO     | job 7089442405 has finished - writing final server update
[2026-04-14 06:35:51] 2026-04-14 04:34:58,208 | INFO     | total number of processed events: 400 (read)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,210 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-7089442405/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,211 | INFO     | extracted standard info from prmon json
[2026-04-14 06:35:51] 2026-04-14 04:34:58,211 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 06:35:51] 2026-04-14 04:34:58,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 06:35:51] 2026-04-14 04:34:58,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 06:35:51] 2026-04-14 04:34:58,215 | INFO     | fitting pss+swap vs Time
[2026-04-14 06:35:51] 2026-04-14 04:34:58,216 | INFO     | sum of square deviations: 4903347750.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,218 | INFO     | sum of deviations: 86133997383.99997
[2026-04-14 06:35:51] 2026-04-14 04:34:58,218 | INFO     | mean x (centered): 0.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,218 | INFO     | mean y: 2455533.952191235
[2026-04-14 06:35:51] 2026-04-14 04:34:58,218 | INFO     | intersect: 2455533.952191235
[2026-04-14 06:35:51] 2026-04-14 04:34:58,219 | INFO     | chi2: 8.807549651837247
[2026-04-14 06:35:51] 2026-04-14 04:34:58,219 | INFO     | sum of square deviations: 4616114457.5
[2026-04-14 06:35:51] 2026-04-14 04:34:58,221 | INFO     | sum of deviations: 101106703675.5
[2026-04-14 06:35:51] 2026-04-14 04:34:58,221 | INFO     | mean x (centered): 0.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,221 | INFO     | mean y: 2463340.2154471544
[2026-04-14 06:35:51] 2026-04-14 04:34:58,221 | INFO     | intersect: 2463340.2154471544
[2026-04-14 06:35:51] 2026-04-14 04:34:58,221 | INFO     | chi2: 8.12040810943647
[2026-04-14 06:35:51] 2026-04-14 04:34:58,222 | INFO     | current chi2=8.12040810943647 (change=7.801733394230029 %)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,222 | INFO     | right removable region: 245
[2026-04-14 06:35:51] 2026-04-14 04:34:58,222 | INFO     | sum of square deviations: 4616114457.5
[2026-04-14 06:35:51] 2026-04-14 04:34:58,224 | INFO     | sum of deviations: -5501328157.500025
[2026-04-14 06:35:51] 2026-04-14 04:34:58,224 | INFO     | mean x (centered): 0.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,224 | INFO     | mean y: 2504173.8333333335
[2026-04-14 06:35:51] 2026-04-14 04:34:58,224 | INFO     | intersect: 2504173.8333333335
[2026-04-14 06:35:51] 2026-04-14 04:34:58,228 | INFO     | chi2: 3.3542076001810366
[2026-04-14 06:35:51] 2026-04-14 04:34:58,228 | INFO     | current chi2=3.3542076001810366 (change=61.91667679691874 %)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,228 | INFO     | sum of square deviations: 4340323240.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,230 | INFO     | sum of deviations: -63580223994.00001
[2026-04-14 06:35:51] 2026-04-14 04:34:58,230 | INFO     | mean x (centered): 0.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,230 | INFO     | mean y: 2536175.8008298757
[2026-04-14 06:35:51] 2026-04-14 04:34:58,230 | INFO     | intersect: 2536175.8008298757
[2026-04-14 06:35:51] 2026-04-14 04:34:58,231 | INFO     | chi2: 1.070500131751194
[2026-04-14 06:35:51] 2026-04-14 04:34:58,231 | INFO     | current chi2=1.070500131751194 (change=68.08485760710172 %)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,231 | INFO     | sum of square deviations: 4075741535.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,233 | INFO     | sum of deviations: -68652915216.49999
[2026-04-14 06:35:51] 2026-04-14 04:34:58,233 | INFO     | mean x (centered): 0.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,233 | INFO     | mean y: 2539057.936440678
[2026-04-14 06:35:51] 2026-04-14 04:34:58,233 | INFO     | intersect: 2539057.936440678
[2026-04-14 06:35:51] 2026-04-14 04:34:58,234 | INFO     | chi2: 1.007783390032603
[2026-04-14 06:35:51] 2026-04-14 04:34:58,234 | INFO     | current chi2=1.007783390032603 (change=5.858639327395023 %)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,234 | INFO     | left removable region: 15
[2026-04-14 06:35:51] 2026-04-14 04:34:58,234 | INFO     | sum of square deviations: 3772712597.5
[2026-04-14 06:35:51] 2026-04-14 04:34:58,236 | INFO     | sum of deviations: -51322968936.5
[2026-04-14 06:35:51] 2026-04-14 04:34:58,236 | INFO     | mean x (centered): 0.0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,236 | INFO     | mean y: 2549320.769565217
[2026-04-14 06:35:51] 2026-04-14 04:34:58,236 | INFO     | intersect: 2549320.769565217
[2026-04-14 06:35:51] 2026-04-14 04:34:58,237 | INFO     | chi2: 0.21601574852131394
[2026-04-14 06:35:51] 2026-04-14 04:34:58,237 | INFO     | current memory leak: -13.60 B/s (using 230 data points, chi2=0.22)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,237 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,237 | INFO     | ..............................
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . Timing measurements:
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . get job = 0 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . initial setup = 118 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . payload setup = 388 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . stage-in = 0 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . payload execution = 15407 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . stage-out = 3 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | . log creation = 1 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,238 | INFO     | ..............................
[2026-04-14 06:35:51] 2026-04-14 04:34:58,690 | INFO     | 
[2026-04-14 06:35:51] 2026-04-14 04:34:58,690 | INFO     | job summary report
[2026-04-14 06:35:51] 2026-04-14 04:34:58,690 | INFO     | --------------------------------------------------
[2026-04-14 06:35:51] 2026-04-14 04:34:58,690 | INFO     | PanDA job id: 7089442405
[2026-04-14 06:35:51] 2026-04-14 04:34:58,690 | INFO     | task id: 49645815
[2026-04-14 06:35:51] 2026-04-14 04:34:58,690 | INFO     | errors: (none)
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | pilot state: finished 
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | transexitcode: 0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | exeerrorcode: 0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | exeerrordiag: 
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | exitcode: 0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | exitmsg: OK
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | cpuconsumptiontime: 68518 s
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | nevents: 400
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | neventsw: 0
[2026-04-14 06:35:51] 2026-04-14 04:34:58,691 | INFO     | pid: 3264
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | pgrp: 3264
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | corecount: 8
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | event service: False
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | sizes: {0: 2279104, 1: 2279790, 2: 2281619, 13: 2281619, 15800: 2312790, 15804: 2321790, 15806: 2321974, 15809: 2322168}
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | --------------------------------------------------
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | 
[2026-04-14 06:35:51] 2026-04-14 04:34:58,692 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-04-14 06:35:51] 2026-04-14 04:34:59,223 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 06:35:51] 2026-04-14 04:34:59,225 | INFO     | job 7089442405 has completed (purged errors)
[2026-04-14 06:35:51] 2026-04-14 04:34:59,226 | INFO     | overall cleanup function is called
[2026-04-14 06:35:51] 2026-04-14 04:35:00,234 | INFO     | --- collectZombieJob: --- 10, [3264]
[2026-04-14 06:35:51] 2026-04-14 04:35:00,234 | INFO     | zombie collector waiting for pid 3264
[2026-04-14 06:35:51] 2026-04-14 04:35:00,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 06:35:51] 2026-04-14 04:35:00,234 | INFO     | collected zombie processes
[2026-04-14 06:35:51] 2026-04-14 04:35:00,234 | INFO     | will attempt to kill all subprocesses of pid=3264
[2026-04-14 06:35:51] 2026-04-14 04:35:00,313 | INFO     | process IDs to be killed: [3264] (in reverse order)
[2026-04-14 06:35:51] 2026-04-14 04:35:01,515 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 06:35:51] 2026-04-14 04:35:01,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 06:35:51] 2026-04-14 04:35:01,518 | INFO     | did not find any defunct processes belonging to 3264
[2026-04-14 06:35:51] 2026-04-14 04:35:01,519 | INFO     | did not find any defunct processes belonging to 3264
[2026-04-14 06:35:51] 2026-04-14 04:35:01,520 | INFO     | Ready for new job
[2026-04-14 06:35:51] 2026-04-14 04:35:01,521 | INFO     | **************************************
[2026-04-14 06:35:51] 2026-04-14 04:35:01,522 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 06:35:51] 2026-04-14 04:35:01,522 | INFO     | **************************************
[2026-04-14 06:35:51] 2026-04-14 04:35:01,522 | INFO     | 
[2026-04-14 06:35:51] 2026-04-14 04:35:01,522 | INFO     | pilot is running in a VM
[2026-04-14 06:35:51] 2026-04-14 04:35:01,522 | INFO     | architecture information:
[2026-04-14 06:35:51] 2026-04-14 04:35:01,532 | INFO     | executing command: cat /etc/os-release
[2026-04-14 06:35:51] 2026-04-14 04:35:01,809 | INFO     | cat /etc/os-release:
[2026-04-14 06:35:51] NAME="CentOS Linux"
[2026-04-14 06:35:51] VERSION="7 (Core)"
[2026-04-14 06:35:51] ID="centos"
[2026-04-14 06:35:51] ID_LIKE="rhel fedora"
[2026-04-14 06:35:51] VERSION_ID="7"
[2026-04-14 06:35:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 06:35:51] ANSI_COLOR="0;31"
[2026-04-14 06:35:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 06:35:51] HOME_URL="https://www.centos.org/"
[2026-04-14 06:35:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 06:35:51] 
[2026-04-14 06:35:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 06:35:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 06:35:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 06:35:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 06:35:51] 
[2026-04-14 06:35:51] 2026-04-14 04:35:01,809 | INFO     | **************************************
[2026-04-14 06:35:51] 2026-04-14 04:35:02,313 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-04-14 06:35:51] 2026-04-14 04:35:02,416 | INFO     | sufficient remaining disk space (495040069632 B)
[2026-04-14 06:35:51] 2026-04-14 04:35:02,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 06:35:51] 2026-04-14 04:35:02,424 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 06:35:51] 2026-04-14 04:35:02,424 | INFO     | update_server=False
[2026-04-14 06:35:51] 2026-04-14 04:35:02,424 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 06:35:51] 2026-04-14 04:35:02,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 06:35:51] 2026-04-14 04:35:02,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 06:35:51] 2026-04-14 04:35:02,956 | INFO     | all job control threads have been joined
[2026-04-14 06:35:51] 2026-04-14 04:35:03,124 | INFO     | all data control threads have been joined
[2026-04-14 06:35:51] 2026-04-14 04:35:03,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 06:35:51] 2026-04-14 04:35:03,195 | INFO     | aborting loop
[2026-04-14 06:35:51] 2026-04-14 04:35:03,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 06:35:51] 2026-04-14 04:35:03,396 | INFO     | all payload control threads have been joined
[2026-04-14 06:35:51] 2026-04-14 04:35:03,430 | INFO     | [job] retrieve thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:03,631 | INFO     | [data] copytool_in thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:03,633 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:03,635 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:03,660 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:03,962 | INFO     | [job] control thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,130 | INFO     | [data] control thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,186 | INFO     | [payload] failed_post thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,201 | INFO     | [job] job monitor thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,384 | INFO     | [job] queue monitor thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,401 | INFO     | [payload] control thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,432 | INFO     | [data] copytool_out thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,646 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,695 | INFO     | [job] validate thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:04,815 | INFO     | [payload] validate_post thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:06,439 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 06:35:51] 2026-04-14 04:35:31,431 | INFO     | PID=31212 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-14 06:35:51] 2026-04-14 04:35:31,432 | INFO     | .. there are 2 such processes running
[2026-04-14 06:35:51] 2026-04-14 04:35:31,432 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 06:35:51] 2026-04-14 04:35:31,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 06:35:51] 2026-04-14 04:35:31,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 06:35:51] 2026-04-14 04:35:42,659 | INFO     | [monitor] cgroup control has ended
[2026-04-14 06:35:51] 2026-04-14 04:35:42,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166822266688)>', '<ExcThread(monitor, started 140166232524544)>']
[2026-04-14 06:35:51] 2026-04-14 04:35:43,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 06:35:51] 2026-04-14 04:35:43,503 | INFO     | [monitor] control thread has ended
[2026-04-14 06:35:51] 2026-04-14 04:35:47,999 | INFO     | all workflow threads have been joined
[2026-04-14 06:35:51] 2026-04-14 04:35:47,999 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 06:35:51] 2026-04-14 04:35:47,999 | INFO     | traces error code: 0
[2026-04-14 06:35:51] 2026-04-14 04:35:47,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 06:35:51] 2026-04-14 04:35:48,247 [wrapper] ==== pilot stdout END ====
[2026-04-14 06:35:51] 2026-04-14 04:35:48,255 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 06:35:51] 2026-04-14 04:35:48,287 [wrapper] pilotpid: 31212
[2026-04-14 06:35:51] 2026-04-14 04:35:48,304 [wrapper] Pilot exit status: 0
[2026-04-14 06:35:51] 2026-04-14 04:35:48,874 [wrapper] pandaids: 7089442405
[2026-04-14 06:35:51] 2026-04-14 04:35:49,877 [wrapper] cleanup supervisor_pilot 26226 31213
[2026-04-14 06:35:51] 2026-04-14 04:35:49,926 [wrapper] Test setup, not cleaning
[2026-04-14 06:35:51] 2026-04-14 04:35:49,930 [wrapper] apfmon messages muted
[2026-04-14 06:35:51] 2026-04-14 04:35:50,029 [wrapper] ==== wrapper stdout END ====
[2026-04-14 06:35:51] 2026-04-14 04:35:50,042 [wrapper] ==== wrapper stderr END ====
[2026-04-14 06:35:51]  *** Error codes and diagnostics ***
[2026-04-14 06:35:51]     "exeErrorCode": 0,
[2026-04-14 06:35:51]     "pilotErrorCode": 0,
[2026-04-14 06:35:51]  *** Listing of results directory ***
[2026-04-14 06:35:51] total 428556
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc      5094 Apr 13 13:14 queuedata.json
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc    644190 Apr 13 13:14 pilot3.tar.gz
[2026-04-14 06:35:51] -rwx------. 1 boinc boinc     36322 Apr 13 13:15 runpilot2-wrapper.sh
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc       100 Apr 14 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 06:35:51] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 02:04 run_atlas
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc       105 Apr 14 02:04 job.xml
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc      6308 Apr 14 02:04 init_data.xml
[2026-04-14 06:35:51] -rw-r--r--. 2 boinc boinc 228766015 Apr 14 02:04 EVNT.48629115._000569.pool.root.1
[2026-04-14 06:35:51] -rw-r--r--. 2 boinc boinc     15665 Apr 14 02:04 start_atlas.sh
[2026-04-14 06:35:51] drwxrwx--x. 2 boinc boinc        68 Apr 14 02:04 shared
[2026-04-14 06:35:51] -rw-r--r--. 2 boinc boinc    656944 Apr 14 02:04 input.tar.gz
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc         0 Apr 14 02:04 boinc_lockfile
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc      2626 Apr 14 02:04 pandaJob.out
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc       415 Apr 14 02:11 workernode_map.json
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc    997504 Apr 14 02:11 agis_schedconf.cvmfs.json
[2026-04-14 06:35:51] drwx------. 5 boinc boinc      4096 Apr 14 02:11 pilot3
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc 202330317 Apr 14 06:33 HITS.49645815._014236.pool.root.1
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc       489 Apr 14 06:34 boinc_task_state.xml
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc      1021 Apr 14 06:34 memory_monitor_summary.json
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc   1511579 Apr 14 06:34 agis_ddmendpoints.agis.ALL.json
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc    391348 Apr 14 06:34 log.49645815._014236.job.log.tgz.1
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc        95 Apr 14 06:34 pilot_heartbeat.json
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc      6348 Apr 14 06:34 heartbeat_new.json
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc      6239 Apr 14 06:34 heartbeat.json
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc      8192 Apr 14 06:35 boinc_mmap_file
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc        28 Apr 14 06:35 wrapper_checkpoint.txt
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc      4880 Apr 14 06:35 pilotlog.txt
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc   1457803 Apr 14 06:35 log.49645815._014236.job.log.1
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc       357 Apr 14 06:35 output.list
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc       410 Apr 14 06:35 runtime_log
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc   1863680 Apr 14 06:35 result.tar.gz
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc      8454 Apr 14 06:35 runtime_log.err
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc       656 Apr 14 06:35 d0344db43b0b.diag
[2026-04-14 06:35:51] -rw-r--r--. 1 boinc boinc     20627 Apr 14 06:35 stderr.txt
[2026-04-14 06:35:51] HITS file was successfully produced:
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc 202330317 Apr 14 06:33 shared/HITS.pool.root.1
[2026-04-14 06:35:51]  *** Contents of shared directory: ***
[2026-04-14 06:35:51] total 423480
[2026-04-14 06:35:51] -rw-r--r--. 2 boinc boinc 228766015 Apr 14 02:04 ATLAS.root_0
[2026-04-14 06:35:51] -rw-r--r--. 2 boinc boinc     15665 Apr 14 02:04 start_atlas.sh
[2026-04-14 06:35:51] -rw-r--r--. 2 boinc boinc    656944 Apr 14 02:04 input.tar.gz
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc 202330317 Apr 14 06:33 HITS.pool.root.1
[2026-04-14 06:35:51] -rw-------. 1 boinc boinc   1863680 Apr 14 06:35 result.tar.gz
06:35:52 (27219): run_atlas exited; CPU time 68659.699503
06:35:52 (27219): called boinc_finish(0)

</stderr_txt>
]]>

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