Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:21:32 (5483): wrapper (7.7.26015): starting
23:21:32 (5483): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 23:21:32] Arguments: --nthreads 8
[2026-04-13 23:21:32] Threads: 8
[2026-04-13 23:21:32] Checking for CVMFS
[2026-04-13 23:21:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 23:21:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 23:21:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 23:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 23:21:36] 2.11.2.0 3850 17727 103880 158430 3 53 23063954 25165824 96 130560 0 4367054 99.920 2168863 3185 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-13 23:21:36] CVMFS is ok
[2026-04-13 23:21:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 23:21:36] Checking for apptainer binary...
[2026-04-13 23:21:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 23:21:36] Running /usr/bin/apptainer --version
[2026-04-13 23:21:37] apptainer version 1.3.2-1.el7
[2026-04-13 23:21:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 23:21:47] cg-vwn451.simple-grid.lan
[2026-04-13 23:21:47] apptainer works
[2026-04-13 23:21:47] Set ATHENA_PROC_NUMBER=8
[2026-04-13 23:21:47] Set ATHENA_CORE_NUMBER=8
[2026-04-13 23:21:47] Starting ATLAS job with PandaID=7089338027
[2026-04-13 23:21:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 04:45:56]  *** The last 200 lines of the pilot log: ***
[2026-04-14 04:45:56] 2026-04-14 02:44:49,962 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/26/workernode_map.json
[2026-04-14 04:45:56] 2026-04-14 02:44:49,963 | INFO     | this job has now completed (state=finished)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,963 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,963 | INFO     | log transfer has been attempted: DONE
[2026-04-14 04:45:56] 2026-04-14 02:44:49,963 | INFO     | job 7089338027 has finished - writing final server update
[2026-04-14 04:45:56] 2026-04-14 02:44:49,964 | INFO     | total number of processed events: 400 (read)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,966 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7089338027/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,967 | INFO     | extracted standard info from prmon json
[2026-04-14 04:45:56] 2026-04-14 02:44:49,967 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 04:45:56] 2026-04-14 02:44:49,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 04:45:56] 2026-04-14 02:44:49,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 04:45:56] 2026-04-14 02:44:49,974 | INFO     | fitting pss+swap vs Time
[2026-04-14 04:45:56] 2026-04-14 02:44:49,975 | INFO     | sum of square deviations: 8971993338.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,978 | INFO     | sum of deviations: 138668478018.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,978 | INFO     | mean x (centered): 0.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,978 | INFO     | mean y: 2447968.286644951
[2026-04-14 04:45:56] 2026-04-14 02:44:49,979 | INFO     | intersect: 2447968.286644951
[2026-04-14 04:45:56] 2026-04-14 02:44:49,979 | INFO     | chi2: 8.177344966271425
[2026-04-14 04:45:56] 2026-04-14 02:44:49,980 | INFO     | sum of square deviations: 8540720135.5
[2026-04-14 04:45:56] 2026-04-14 02:44:49,983 | INFO     | sum of deviations: 156566936581.5
[2026-04-14 04:45:56] 2026-04-14 02:44:49,983 | INFO     | mean x (centered): 0.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,983 | INFO     | mean y: 2454202.1754966886
[2026-04-14 04:45:56] 2026-04-14 02:44:49,984 | INFO     | intersect: 2454202.1754966886
[2026-04-14 04:45:56] 2026-04-14 02:44:49,984 | INFO     | chi2: 7.467847974357762
[2026-04-14 04:45:56] 2026-04-14 02:44:49,984 | INFO     | current chi2=7.467847974357762 (change=8.676373503136777 %)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,984 | INFO     | right removable region: 301
[2026-04-14 04:45:56] 2026-04-14 02:44:49,985 | INFO     | sum of square deviations: 8540720135.5
[2026-04-14 04:45:56] 2026-04-14 02:44:49,988 | INFO     | sum of deviations: 32811992659.000004
[2026-04-14 04:45:56] 2026-04-14 02:44:49,988 | INFO     | mean x (centered): 0.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,988 | INFO     | mean y: 2485375.8344370862
[2026-04-14 04:45:56] 2026-04-14 02:44:49,989 | INFO     | intersect: 2485375.8344370862
[2026-04-14 04:45:56] 2026-04-14 02:44:49,989 | INFO     | chi2: 3.401425065174249
[2026-04-14 04:45:56] 2026-04-14 02:44:49,989 | INFO     | current chi2=3.401425065174249 (change=58.40428550826838 %)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,990 | INFO     | sum of square deviations: 8123493708.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,993 | INFO     | sum of deviations: -43573471627.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,993 | INFO     | mean x (centered): 0.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,993 | INFO     | mean y: 2513252.925925926
[2026-04-14 04:45:56] 2026-04-14 02:44:49,993 | INFO     | intersect: 2513252.925925926
[2026-04-14 04:45:56] 2026-04-14 02:44:49,994 | INFO     | chi2: 1.007138449603436
[2026-04-14 04:45:56] 2026-04-14 02:44:49,994 | INFO     | current chi2=1.007138449603436 (change=70.39069124541064 %)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,995 | INFO     | sum of square deviations: 7720081493.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,997 | INFO     | sum of deviations: -49222912451.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,998 | INFO     | mean x (centered): 0.0
[2026-04-14 04:45:56] 2026-04-14 02:44:49,998 | INFO     | mean y: 2515343.5479452056
[2026-04-14 04:45:56] 2026-04-14 02:44:49,998 | INFO     | intersect: 2515343.5479452056
[2026-04-14 04:45:56] 2026-04-14 02:44:49,998 | INFO     | chi2: 0.9248977229795963
[2026-04-14 04:45:56] 2026-04-14 02:44:49,999 | INFO     | current chi2=0.9248977229795963 (change=8.165781641662296 %)
[2026-04-14 04:45:56] 2026-04-14 02:44:49,999 | INFO     | left removable region: 15
[2026-04-14 04:45:56] 2026-04-14 02:44:49,999 | INFO     | sum of square deviations: 7253894147.5
[2026-04-14 04:45:56] 2026-04-14 02:44:50,002 | INFO     | sum of deviations: -29112499245.999996
[2026-04-14 04:45:56] 2026-04-14 02:44:50,002 | INFO     | mean x (centered): 0.0
[2026-04-14 04:45:56] 2026-04-14 02:44:50,003 | INFO     | mean y: 2523106.20979021
[2026-04-14 04:45:56] 2026-04-14 02:44:50,003 | INFO     | intersect: 2523106.20979021
[2026-04-14 04:45:56] 2026-04-14 02:44:50,003 | INFO     | chi2: 0.1422547565136787
[2026-04-14 04:45:56] 2026-04-14 02:44:50,004 | INFO     | current memory leak: -4.01 B/s (using 286 data points, chi2=0.14)
[2026-04-14 04:45:56] 2026-04-14 02:44:50,004 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-04-14 04:45:56] 2026-04-14 02:44:50,004 | INFO     | ..............................
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . Timing measurements:
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . get job = 0 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . initial setup = 118 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . payload setup = 172 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . stage-in = 0 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . payload execution = 18802 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . stage-out = 1 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | . log creation = 0 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,005 | INFO     | ..............................
[2026-04-14 04:45:56] 2026-04-14 02:44:50,121 | INFO     | 
[2026-04-14 04:45:56] 2026-04-14 02:44:50,121 | INFO     | job summary report
[2026-04-14 04:45:56] 2026-04-14 02:44:50,121 | INFO     | --------------------------------------------------
[2026-04-14 04:45:56] 2026-04-14 02:44:50,121 | INFO     | PanDA job id: 7089338027
[2026-04-14 04:45:56] 2026-04-14 02:44:50,121 | INFO     | task id: 49645815
[2026-04-14 04:45:56] 2026-04-14 02:44:50,121 | INFO     | errors: (none)
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | pilot state: finished 
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | transexitcode: 0
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | exeerrorcode: 0
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | exeerrordiag: 
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | exitcode: 0
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | exitmsg: OK
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | cpuconsumptiontime: 72511 s
[2026-04-14 04:45:56] 2026-04-14 02:44:50,122 | INFO     | nevents: 400
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | neventsw: 0
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | pid: 13914
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | pgrp: 13914
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | corecount: 8
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | event service: False
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | sizes: {0: 2279111, 1: 2280024, 2: 2281626, 12: 2281626, 18978: 2314329, 18980: 2323651}
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | --------------------------------------------------
[2026-04-14 04:45:56] 2026-04-14 02:44:50,123 | INFO     | 
[2026-04-14 04:45:56] 2026-04-14 02:44:50,124 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-04-14 04:45:56] 2026-04-14 02:44:50,153 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 04:45:56] 2026-04-14 02:44:50,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,156 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 04:45:56] 2026-04-14 02:44:50,156 | INFO     | job 7089338027 has completed (purged errors)
[2026-04-14 04:45:56] 2026-04-14 02:44:50,156 | INFO     | overall cleanup function is called
[2026-04-14 04:45:56] 2026-04-14 02:44:51,165 | INFO     | --- collectZombieJob: --- 10, [13914]
[2026-04-14 04:45:56] 2026-04-14 02:44:51,165 | INFO     | zombie collector waiting for pid 13914
[2026-04-14 04:45:56] 2026-04-14 02:44:51,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 04:45:56] 2026-04-14 02:44:51,165 | INFO     | collected zombie processes
[2026-04-14 04:45:56] 2026-04-14 02:44:51,165 | INFO     | will attempt to kill all subprocesses of pid=13914
[2026-04-14 04:45:56] 2026-04-14 02:44:51,228 | INFO     | process IDs to be killed: [13914] (in reverse order)
[2026-04-14 04:45:56] 2026-04-14 02:44:51,275 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 04:45:56] 2026-04-14 02:44:51,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 04:45:56] 2026-04-14 02:44:51,277 | INFO     | did not find any defunct processes belonging to 13914
[2026-04-14 04:45:56] 2026-04-14 02:44:51,279 | INFO     | did not find any defunct processes belonging to 13914
[2026-04-14 04:45:56] 2026-04-14 02:44:51,279 | INFO     | Ready for new job
[2026-04-14 04:45:56] 2026-04-14 02:44:51,281 | INFO     | **************************************
[2026-04-14 04:45:56] 2026-04-14 02:44:51,281 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 04:45:56] 2026-04-14 02:44:51,281 | INFO     | **************************************
[2026-04-14 04:45:56] 2026-04-14 02:44:51,281 | INFO     | 
[2026-04-14 04:45:56] 2026-04-14 02:44:51,282 | INFO     | pilot is running in a VM
[2026-04-14 04:45:56] 2026-04-14 02:44:51,282 | INFO     | architecture information:
[2026-04-14 04:45:56] 2026-04-14 02:44:51,283 | INFO     | executing command: cat /etc/os-release
[2026-04-14 04:45:56] 2026-04-14 02:44:51,305 | INFO     | cat /etc/os-release:
[2026-04-14 04:45:56] NAME="CentOS Linux"
[2026-04-14 04:45:56] VERSION="7 (Core)"
[2026-04-14 04:45:56] ID="centos"
[2026-04-14 04:45:56] ID_LIKE="rhel fedora"
[2026-04-14 04:45:56] VERSION_ID="7"
[2026-04-14 04:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 04:45:56] ANSI_COLOR="0;31"
[2026-04-14 04:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 04:45:56] HOME_URL="https://www.centos.org/"
[2026-04-14 04:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 04:45:56] 
[2026-04-14 04:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 04:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 04:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 04:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 04:45:56] 
[2026-04-14 04:45:56] 2026-04-14 02:44:51,306 | INFO     | **************************************
[2026-04-14 04:45:56] 2026-04-14 02:44:51,809 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-04-14 04:45:56] 2026-04-14 02:44:51,829 | INFO     | sufficient remaining disk space (498068357120 B)
[2026-04-14 04:45:56] 2026-04-14 02:44:51,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 04:45:56] 2026-04-14 02:44:51,830 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 04:45:56] 2026-04-14 02:44:51,830 | INFO     | update_server=False
[2026-04-14 04:45:56] 2026-04-14 02:44:51,830 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 04:45:56] 2026-04-14 02:44:51,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 04:45:56] 2026-04-14 02:44:51,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 04:45:56] 2026-04-14 02:44:51,905 | INFO     | all job control threads have been joined
[2026-04-14 04:45:56] 2026-04-14 02:44:52,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 04:45:56] 2026-04-14 02:44:52,216 | INFO     | aborting loop
[2026-04-14 04:45:56] 2026-04-14 02:44:52,820 | INFO     | all data control threads have been joined
[2026-04-14 04:45:56] 2026-04-14 02:44:52,836 | INFO     | [job] retrieve thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:52,836 | INFO     | [job] queue monitor thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:52,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 04:45:56] 2026-04-14 02:44:52,911 | INFO     | [job] control thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:52,920 | INFO     | all payload control threads have been joined
[2026-04-14 04:45:56] 2026-04-14 02:44:52,971 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,033 | INFO     | [data] copytool_in thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,108 | INFO     | [payload] failed_post thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,222 | INFO     | [job] job monitor thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,468 | INFO     | [job] validate thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,666 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,826 | INFO     | [data] control thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:53,926 | INFO     | [payload] control thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:54,025 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:54,093 | INFO     | [payload] validate_post thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:54,232 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:54,844 | INFO     | [data] copytool_out thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:44:55,837 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 04:45:56] 2026-04-14 02:45:22,068 | INFO     | PID=9482 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-14 04:45:56] 2026-04-14 02:45:22,068 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 04:45:56] 2026-04-14 02:45:22,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 04:45:56] 2026-04-14 02:45:22,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 04:45:56] 2026-04-14 02:45:49,421 | INFO     | [monitor] cgroup control has ended
[2026-04-14 04:45:56] 2026-04-14 02:45:51,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706831087424)>', '<ExcThread(monitor, started 139706402588416)>']
[2026-04-14 04:45:56] 2026-04-14 02:45:52,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 04:45:56] 2026-04-14 02:45:52,210 | INFO     | [monitor] control thread has ended
[2026-04-14 04:45:56] 2026-04-14 02:45:56,510 | INFO     | all workflow threads have been joined
[2026-04-14 04:45:56] 2026-04-14 02:45:56,510 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 04:45:56] 2026-04-14 02:45:56,511 | INFO     | traces error code: 0
[2026-04-14 04:45:56] 2026-04-14 02:45:56,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 04:45:56] 2026-04-14 02:45:56,664 [wrapper] ==== pilot stdout END ====
[2026-04-14 04:45:56] 2026-04-14 02:45:56,670 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 04:45:56] 2026-04-14 02:45:56,673 [wrapper] pilotpid: 9482
[2026-04-14 04:45:56] 2026-04-14 02:45:56,677 [wrapper] Pilot exit status: 0
[2026-04-14 04:45:56] 2026-04-14 02:45:56,694 [wrapper] pandaids: 7089338027
[2026-04-14 04:45:56] 2026-04-14 02:45:56,739 [wrapper] cleanup supervisor_pilot 20557 9483
[2026-04-14 04:45:56] 2026-04-14 02:45:56,747 [wrapper] Test setup, not cleaning
[2026-04-14 04:45:56] 2026-04-14 02:45:56,759 [wrapper] apfmon messages muted
[2026-04-14 04:45:56] 2026-04-14 02:45:56,763 [wrapper] ==== wrapper stdout END ====
[2026-04-14 04:45:56] 2026-04-14 02:45:56,767 [wrapper] ==== wrapper stderr END ====
[2026-04-14 04:45:56]  *** Error codes and diagnostics ***
[2026-04-14 04:45:56]     "exeErrorCode": 0,
[2026-04-14 04:45:56]     "pilotErrorCode": 0,
[2026-04-14 04:45:56]  *** Listing of results directory ***
[2026-04-14 04:45:56] total 423016
[2026-04-14 04:45:56] -rwx------. 1 boinc boinc     36322 Apr 13 11:57 runpilot2-wrapper.sh
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc    644190 Apr 13 11:58 pilot3.tar.gz
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc      5094 Apr 13 11:58 queuedata.json
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc       100 Apr 13 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 04:45:56] -rwxr-xr-x. 1 boinc boinc      7986 Apr 13 23:21 run_atlas
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc       105 Apr 13 23:21 job.xml
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc      6308 Apr 13 23:21 init_data.xml
[2026-04-14 04:45:56] -rw-r--r--. 2 boinc boinc 224065733 Apr 13 23:21 EVNT.48629115._000548.pool.root.1
[2026-04-14 04:45:56] -rw-r--r--. 2 boinc boinc     15665 Apr 13 23:21 start_atlas.sh
[2026-04-14 04:45:56] drwxrwx--x. 2 boinc boinc        68 Apr 13 23:21 shared
[2026-04-14 04:45:56] -rw-r--r--. 2 boinc boinc    656953 Apr 13 23:21 input.tar.gz
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc         0 Apr 13 23:21 boinc_lockfile
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc      2630 Apr 13 23:21 pandaJob.out
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc       415 Apr 13 23:28 workernode_map.json
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc    997488 Apr 13 23:28 agis_schedconf.cvmfs.json
[2026-04-14 04:45:56] drwx------. 5 boinc boinc      4096 Apr 13 23:28 pilot3
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc 200689116 Apr 14 04:44 HITS.49645815._013724.pool.root.1
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc       488 Apr 14 04:44 boinc_task_state.xml
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc      1018 Apr 14 04:44 memory_monitor_summary.json
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc        95 Apr 14 04:44 pilot_heartbeat.json
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc   1511579 Apr 14 04:44 agis_ddmendpoints.agis.ALL.json
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc    439990 Apr 14 04:44 log.49645815._013724.job.log.tgz.1
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc      6345 Apr 14 04:44 heartbeat_new.json
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc      6236 Apr 14 04:44 heartbeat.json
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc      8192 Apr 14 04:45 boinc_mmap_file
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc        28 Apr 14 04:45 wrapper_checkpoint.txt
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc      4804 Apr 14 04:45 pilotlog.txt
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc   1742308 Apr 14 04:45 log.49645815._013724.job.log.1
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc       357 Apr 14 04:45 output.list
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc       410 Apr 14 04:45 runtime_log
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc   2201600 Apr 14 04:45 result.tar.gz
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc      8454 Apr 14 04:45 runtime_log.err
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc       656 Apr 14 04:45 bdf1b95010df.diag
[2026-04-14 04:45:56] -rw-r--r--. 1 boinc boinc     20631 Apr 14 04:45 stderr.txt
[2026-04-14 04:45:56] HITS file was successfully produced:
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc 200689116 Apr 14 04:44 shared/HITS.pool.root.1
[2026-04-14 04:45:56]  *** Contents of shared directory: ***
[2026-04-14 04:45:56] total 417616
[2026-04-14 04:45:56] -rw-r--r--. 2 boinc boinc 224065733 Apr 13 23:21 ATLAS.root_0
[2026-04-14 04:45:56] -rw-r--r--. 2 boinc boinc     15665 Apr 13 23:21 start_atlas.sh
[2026-04-14 04:45:56] -rw-r--r--. 2 boinc boinc    656953 Apr 13 23:21 input.tar.gz
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc 200689116 Apr 14 04:44 HITS.pool.root.1
[2026-04-14 04:45:56] -rw-------. 1 boinc boinc   2201600 Apr 14 04:45 result.tar.gz
04:45:58 (5483): run_atlas exited; CPU time 72707.030481
04:45:58 (5483): called boinc_finish(0)

</stderr_txt>
]]>

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