Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:58:36 (819193): wrapper (7.7.26015): starting
11:58:36 (819193): wrapper: running run_atlas (--nthreads 12)
[2026-04-13 11:58:36] Arguments: --nthreads 12
[2026-04-13 11:58:36] Threads: 12
[2026-04-13 11:58:36] Checking for CVMFS
[2026-04-13 11:58:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 11:58:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 11:58:36] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 11:58:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 11:58:36] 2.11.0.0 3376991 330 69156 158415 1 188 3963271 6144001 14724 130560 0 5629181 99.999 17931 573 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-04-13 11:58:36] CVMFS is ok
[2026-04-13 11:58:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 11:58:36] Checking for apptainer binary...
[2026-04-13 11:58:36] apptainer is not installed, using version from CVMFS
[2026-04-13 11:58:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 11:58:37] radiat0r
[2026-04-13 11:58:37] apptainer works
[2026-04-13 11:58:37] Set ATHENA_PROC_NUMBER=12
[2026-04-13 11:58:37] Set ATHENA_CORE_NUMBER=12
[2026-04-13 11:58:37] Starting ATLAS job with PandaID=7089105851
[2026-04-13 11:58:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 12:52:09]  *** The last 200 lines of the pilot log: ***
[2026-04-13 12:52:10]  replicas=None
[2026-04-13 12:52:10]  scope=mc23_13p6TeV
[2026-04-13 12:52:10]  status=None
[2026-04-13 12:52:10]  status_code=0
[2026-04-13 12:52:10]  storage_token=
[2026-04-13 12:52:10]  surl=/var/lib/boinc/slots/14/PanDA_Pilot-7089105851/log.49263191._067689.job.log.tgz.1
[2026-04-13 12:52:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/b9/log.49263191._067689.job.log.tgz.1
[2026-04-13 12:52:10]  workdir=None
[2026-04-13 12:52:10] ]
[2026-04-13 12:52:10] 2026-04-13 12:51:22,854 | INFO     | transferring file log.49263191._067689.job.log.tgz.1 from /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/log.49263191._067689.job.log.tgz.1 to /var/lib/boinc/slots
[2026-04-13 12:52:10] 2026-04-13 12:51:22,855 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/log.49263191._067689.job.log.tgz.1 /var/lib/boinc/slots/14/log.49263191._067689.j
[2026-04-13 12:52:10] 2026-04-13 12:51:22,884 | INFO     | adding to output.list: log.49263191._067689.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/b9/log.49263191._067689.job.log.tg
[2026-04-13 12:52:10] 2026-04-13 12:51:22,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-13 12:52:10] 2026-04-13 12:51:22,885 | INFO     | summary of transferred files:
[2026-04-13 12:52:10] 2026-04-13 12:51:22,886 | INFO     |  -- lfn=log.49263191._067689.job.log.tgz.1, status_code=0, status=transferred
[2026-04-13 12:52:10] 2026-04-13 12:51:22,886 | INFO     | stage-out finished correctly
[2026-04-13 12:52:10] 2026-04-13 12:51:23,627 | WARNING  | process 829451 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 12:52:10] 2026-04-13 12:51:23,627 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,628 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,629 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-13 12:52:10] 2026-04-13 12:51:23,629 | WARNING  | maxPSS not found in memory monitor output
[2026-04-13 12:52:10] 2026-04-13 12:51:23,629 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4441135 B
[2026-04-13 12:52:10] 2026-04-13 12:51:23,630 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16080 B
[2026-04-13 12:52:10] 2026-04-13 12:51:23,630 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-04-13 12:52:10] 2026-04-13 12:51:23,658 | INFO     | sufficient remaining disk space (1717342044160 B)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,659 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,660 | INFO     | size of work directory /var/lib/boinc/slots/14/PanDA_Pilot-7089105851: 4729223 B (within 5033164800 B limit)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,660 | INFO     | pfn file=/var/lib/boinc/slots/14/PanDA_Pilot-7089105851/HITS.49263191._067689.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,660 | INFO     | total size of present files: 0 B (workdir size: 4729223 B)
[2026-04-13 12:52:10] 2026-04-13 12:51:23,660 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/HITS.49263191._067689.pool.root.1 since it does not exist
[2026-04-13 12:52:10] 2026-04-13 12:51:24,481 | INFO     | number of running child processes to parent process 829451: 1
[2026-04-13 12:52:10] 2026-04-13 12:51:24,481 | INFO     | maximum number of monitored processes: 6
[2026-04-13 12:52:10] 2026-04-13 12:51:25,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-13 12:52:10] 2026-04-13 12:51:26,775 | INFO     | job 7089105851 has state=finished
[2026-04-13 12:52:10] 2026-04-13 12:51:26,776 | INFO     | preparing for final server update for job 7089105851 in state='finished'
[2026-04-13 12:52:10] 2026-04-13 12:51:26,776 | INFO     | reading metadata from: /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/jobReport.json
[2026-04-13 12:52:10] 2026-04-13 12:51:26,779 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/14/workernode_map.json
[2026-04-13 12:52:10] 2026-04-13 12:51:26,779 | INFO     | this job has now completed (state=finished)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,779 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,780 | INFO     | log transfer has been attempted: DONE
[2026-04-13 12:52:10] 2026-04-13 12:51:26,780 | INFO     | job 7089105851 has finished - writing final server update
[2026-04-13 12:52:10] 2026-04-13 12:51:26,780 | INFO     | total number of processed events: 400 (read)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,850 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7089105851/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,851 | INFO     | extracted standard info from prmon json
[2026-04-13 12:52:10] 2026-04-13 12:51:26,851 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 12:52:10] 2026-04-13 12:51:26,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 12:52:10] 2026-04-13 12:51:26,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 12:52:10] 2026-04-13 12:51:26,853 | INFO     | fitting pss+swap vs Time
[2026-04-13 12:52:10] 2026-04-13 12:51:26,853 | INFO     | sum of square deviations: 26400495.0
[2026-04-13 12:52:10] 2026-04-13 12:51:26,853 | INFO     | sum of deviations: 307863614.49999994
[2026-04-13 12:52:10] 2026-04-13 12:51:26,853 | INFO     | mean x (centered): 0.0
[2026-04-13 12:52:10] 2026-04-13 12:51:26,853 | INFO     | mean y: 2666922.159090909
[2026-04-13 12:52:10] 2026-04-13 12:51:26,853 | INFO     | intersect: 2666922.159090909
[2026-04-13 12:52:10] 2026-04-13 12:51:26,854 | INFO     | chi2: 0.0008498976994267979
[2026-04-13 12:52:10] 2026-04-13 12:51:26,854 | INFO     | current memory leak: 11.66 B/s (using 44 data points, chi2=0.00)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,854 | INFO     | could have reported an average CPU frequency of 2370 MHz (5 samples)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,854 | INFO     | ..............................
[2026-04-13 12:52:10] 2026-04-13 12:51:26,854 | INFO     | . Timing measurements:
[2026-04-13 12:52:10] 2026-04-13 12:51:26,854 | INFO     | . get job = 0 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | . initial setup = 8 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | . payload setup = 13 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | . stage-in = 0 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | . payload execution = 3113 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | . stage-out = 0 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | . log creation = 0 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,855 | INFO     | ..............................
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | 
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | job summary report
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | --------------------------------------------------
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | PanDA job id: 7089105851
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | task id: 49263191
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | errors: (none)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,955 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | pilot state: finished 
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | transexitcode: 0
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | exeerrorcode: 0
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | exeerrordiag: 
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | exitcode: 0
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | exitmsg: OK
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | cpuconsumptiontime: 33658 s
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | nevents: 400
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | neventsw: 0
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | pid: 829451
[2026-04-13 12:52:10] 2026-04-13 12:51:26,956 | INFO     | pgrp: 829451
[2026-04-13 12:52:10] 2026-04-13 12:51:26,957 | INFO     | corecount: 12
[2026-04-13 12:52:10] 2026-04-13 12:51:26,957 | INFO     | event service: False
[2026-04-13 12:52:10] 2026-04-13 12:51:26,957 | INFO     | sizes: {0: 2279666, 1: 2281551, 12: 2281551, 3129: 2307135, 3130: 2307134, 3131: 2316190, 3134: 2316402, 3135: 2316628}
[2026-04-13 12:52:10] 2026-04-13 12:51:26,957 | INFO     | --------------------------------------------------
[2026-04-13 12:52:10] 2026-04-13 12:51:26,957 | INFO     | 
[2026-04-13 12:52:10] 2026-04-13 12:51:26,957 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-04-13 12:52:10] 2026-04-13 12:51:26,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 12:52:10] 2026-04-13 12:51:26,993 | INFO     | job 7089105851 has completed (purged errors)
[2026-04-13 12:52:10] 2026-04-13 12:51:26,994 | INFO     | overall cleanup function is called
[2026-04-13 12:52:10] 2026-04-13 12:51:28,002 | INFO     | --- collectZombieJob: --- 10, [829451]
[2026-04-13 12:52:10] 2026-04-13 12:51:28,002 | INFO     | zombie collector waiting for pid 829451
[2026-04-13 12:52:10] 2026-04-13 12:51:28,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 12:52:10] 2026-04-13 12:51:28,002 | INFO     | collected zombie processes
[2026-04-13 12:52:10] 2026-04-13 12:51:28,003 | INFO     | will attempt to kill all subprocesses of pid=829451
[2026-04-13 12:52:10] 2026-04-13 12:51:28,896 | INFO     | process IDs to be killed: [829451] (in reverse order)
[2026-04-13 12:52:10] 2026-04-13 12:51:29,188 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 12:52:10] 2026-04-13 12:51:29,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 12:52:10] 2026-04-13 12:51:29,219 | INFO     | did not find any defunct processes belonging to 829451
[2026-04-13 12:52:10] 2026-04-13 12:51:29,248 | INFO     | did not find any defunct processes belonging to 829451
[2026-04-13 12:52:10] 2026-04-13 12:51:29,249 | INFO     | Ready for new job
[2026-04-13 12:52:10] 2026-04-13 12:51:29,251 | INFO     | **************************************
[2026-04-13 12:52:10] 2026-04-13 12:51:29,251 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 12:52:10] 2026-04-13 12:51:29,251 | INFO     | **************************************
[2026-04-13 12:52:10] 2026-04-13 12:51:29,251 | INFO     | 
[2026-04-13 12:52:10] 2026-04-13 12:51:29,289 | INFO     | architecture information:
[2026-04-13 12:52:10] 2026-04-13 12:51:29,290 | INFO     | executing command: cat /etc/os-release
[2026-04-13 12:52:10] 2026-04-13 12:51:29,317 | INFO     | cat /etc/os-release:
[2026-04-13 12:52:10] NAME="CentOS Linux"
[2026-04-13 12:52:10] VERSION="7 (Core)"
[2026-04-13 12:52:10] ID="centos"
[2026-04-13 12:52:10] ID_LIKE="rhel fedora"
[2026-04-13 12:52:10] VERSION_ID="7"
[2026-04-13 12:52:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 12:52:10] ANSI_COLOR="0;31"
[2026-04-13 12:52:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 12:52:10] HOME_URL="https://www.centos.org/"
[2026-04-13 12:52:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 12:52:10] 
[2026-04-13 12:52:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 12:52:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 12:52:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 12:52:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 12:52:10] 
[2026-04-13 12:52:10] 2026-04-13 12:51:29,321 | INFO     | **************************************
[2026-04-13 12:52:10] 2026-04-13 12:51:29,826 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-04-13 12:52:10] 2026-04-13 12:51:29,858 | INFO     | sufficient remaining disk space (1717313732608 B)
[2026-04-13 12:52:10] 2026-04-13 12:51:29,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 12:52:10] 2026-04-13 12:51:29,859 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 12:52:10] 2026-04-13 12:51:29,859 | INFO     | update_server=False
[2026-04-13 12:52:10] 2026-04-13 12:51:29,859 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 12:52:10] 2026-04-13 12:51:30,162 | INFO     | all data control threads have been joined
[2026-04-13 12:52:10] 2026-04-13 12:51:30,479 | INFO     | all job control threads have been joined
[2026-04-13 12:52:10] 2026-04-13 12:51:30,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 12:52:10] 2026-04-13 12:51:30,493 | INFO     | aborting loop
[2026-04-13 12:52:10] 2026-04-13 12:51:30,747 | INFO     | all payload control threads have been joined
[2026-04-13 12:52:10] 2026-04-13 12:51:30,865 | INFO     | [job] retrieve thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:30,978 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 12:52:10] 2026-04-13 12:51:31,133 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,166 | INFO     | [data] control thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,218 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 12:52:10] 2026-04-13 12:51:31,485 | INFO     | [job] control thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,499 | INFO     | [job] job monitor thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,558 | INFO     | [data] copytool_in thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,750 | INFO     | [payload] control thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,896 | INFO     | [payload] validate_post thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,941 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:31,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 12:52:10] 2026-04-13 12:51:32,078 | INFO     | [job] validate thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:32,267 | INFO     | [payload] failed_post thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:32,971 | INFO     | [job] queue monitor thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:33,006 | INFO     | [data] copytool_out thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:35,400 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 12:52:10] 2026-04-13 12:51:59,257 | INFO     | PID=823874 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 12:52:10] 2026-04-13 12:51:59,257 | INFO     | .. there are 17 such processes running
[2026-04-13 12:52:10] 2026-04-13 12:51:59,259 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 12:52:10] 2026-04-13 12:51:59,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 12:52:10] 2026-04-13 12:51:59,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 12:52:10] 2026-04-13 12:52:03,702 | INFO     | [monitor] cgroup control has ended
[2026-04-13 12:52:10] 2026-04-13 12:52:04,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253216180032)>', '<ExcThread(monitor, started 140252324804352)>']
[2026-04-13 12:52:10] 2026-04-13 12:52:05,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 12:52:10] 2026-04-13 12:52:05,287 | INFO     | [monitor] control thread has ended
[2026-04-13 12:52:10] 2026-04-13 12:52:09,410 | INFO     | all workflow threads have been joined
[2026-04-13 12:52:10] 2026-04-13 12:52:09,410 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 12:52:10] 2026-04-13 12:52:09,411 | INFO     | traces error code: 0
[2026-04-13 12:52:10] 2026-04-13 12:52:09,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 12:52:10] 2026-04-13 12:52:09,641 [wrapper] ==== pilot stdout END ====
[2026-04-13 12:52:10] 2026-04-13 12:52:09,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 12:52:10] 2026-04-13 12:52:09,650 [wrapper] pilotpid: 823874
[2026-04-13 12:52:10] 2026-04-13 12:52:09,654 [wrapper] Pilot exit status: 0
[2026-04-13 12:52:10] 2026-04-13 12:52:09,669 [wrapper] pandaids: 7089105851
[2026-04-13 12:52:10] 2026-04-13 12:52:09,853 [wrapper] cleanup supervisor_pilot 1075343 823875
[2026-04-13 12:52:10] 2026-04-13 12:52:09,858 [wrapper] Test setup, not cleaning
[2026-04-13 12:52:10] 2026-04-13 12:52:09,862 [wrapper] apfmon messages muted
[2026-04-13 12:52:10] 2026-04-13 12:52:09,866 [wrapper] ==== wrapper stdout END ====
[2026-04-13 12:52:10] 2026-04-13 12:52:09,870 [wrapper] ==== wrapper stderr END ====
[2026-04-13 12:52:10]  *** Error codes and diagnostics ***
[2026-04-13 12:52:10]     "exeErrorCode": 0,
[2026-04-13 12:52:10]     "pilotErrorCode": 0,
[2026-04-13 12:52:10]  *** Listing of results directory ***
[2026-04-13 12:52:10] total 414988
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc    644190 Apr 13 07:44 pilot3.tar.gz
[2026-04-13 12:52:10] -rwx------ 1 boinc boinc     36322 Apr 13 07:48 runpilot2-wrapper.sh
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc      5094 Apr 13 07:52 queuedata.json
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc       100 Apr 13 11:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 12:52:10] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 11:58 run_atlas
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc       105 Apr 13 11:58 job.xml
[2026-04-13 12:52:10] -rw-r--r-- 2 boinc boinc     15665 Apr 13 11:58 start_atlas.sh
[2026-04-13 12:52:10] drwxrwx--x 2 boinc boinc      4096 Apr 13 11:58 shared
[2026-04-13 12:52:10] -rw-r--r-- 2 boinc boinc    656927 Apr 13 11:58 input.tar.gz
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc      9331 Apr 13 11:58 init_data.xml
[2026-04-13 12:52:10] -rw-r--r-- 2 boinc boinc 223195609 Apr 13 11:58 EVNT.49263189._001859.pool.root.1
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc         0 Apr 13 11:58 boinc_setup_complete
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc         0 Apr 13 11:58 boinc_lockfile
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc      2578 Apr 13 11:58 pandaJob.out
[2026-04-13 12:52:10] -rw------- 1 boinc boinc    997740 Apr 13 11:58 agis_schedconf.cvmfs.json
[2026-04-13 12:52:10] -rw------- 1 boinc boinc   1511579 Apr 13 11:58 agis_ddmendpoints.agis.ALL.json
[2026-04-13 12:52:10] -rw------- 1 boinc boinc       419 Apr 13 11:58 workernode_map.json
[2026-04-13 12:52:10] drwx------ 5 boinc boinc      4096 Apr 13 11:58 pilot3
[2026-04-13 12:52:10] -rw------- 1 boinc boinc 196332418 Apr 13 12:50 HITS.49263191._067689.pool.root.1
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc       487 Apr 13 12:50 boinc_task_state.xml
[2026-04-13 12:52:10] -rw------- 1 boinc boinc      1028 Apr 13 12:51 memory_monitor_summary.json
[2026-04-13 12:52:10] -rw------- 1 boinc boinc    356231 Apr 13 12:51 log.49263191._067689.job.log.tgz.1
[2026-04-13 12:52:10] -rw------- 1 boinc boinc      6309 Apr 13 12:51 heartbeat_new.json
[2026-04-13 12:52:10] -rw------- 1 boinc boinc      6200 Apr 13 12:51 heartbeat.json
[2026-04-13 12:52:10] -rw------- 1 boinc boinc        95 Apr 13 12:51 pilot_heartbeat.json
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc      8192 Apr 13 12:52 boinc_mmap_file
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc        27 Apr 13 12:52 wrapper_checkpoint.txt
[2026-04-13 12:52:10] -rw------- 1 boinc boinc      4822 Apr 13 12:52 pilotlog.txt
[2026-04-13 12:52:10] -rw------- 1 boinc boinc    320393 Apr 13 12:52 log.49263191._067689.job.log.1
[2026-04-13 12:52:10] -rw------- 1 boinc boinc       357 Apr 13 12:52 output.list
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc       410 Apr 13 12:52 runtime_log
[2026-04-13 12:52:10] -rw------- 1 boinc boinc    696320 Apr 13 12:52 result.tar.gz
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc      8409 Apr 13 12:52 runtime_log.err
[2026-04-13 12:52:10] -rw------- 1 boinc boinc       643 Apr 13 12:52 9fc0ad0d4ea9.diag
[2026-04-13 12:52:10] -rw-r--r-- 1 boinc boinc     21837 Apr 13 12:52 stderr.txt
[2026-04-13 12:52:10] HITS file was successfully produced:
[2026-04-13 12:52:10] -rw------- 1 boinc boinc 196332418 Apr 13 12:50 shared/HITS.pool.root.1
[2026-04-13 12:52:10]  *** Contents of shared directory: ***
[2026-04-13 12:52:10] total 411048
[2026-04-13 12:52:10] -rw-r--r-- 2 boinc boinc     15665 Apr 13 11:58 start_atlas.sh
[2026-04-13 12:52:10] -rw-r--r-- 2 boinc boinc    656927 Apr 13 11:58 input.tar.gz
[2026-04-13 12:52:10] -rw-r--r-- 2 boinc boinc 223195609 Apr 13 11:58 ATLAS.root_0
[2026-04-13 12:52:10] -rw------- 1 boinc boinc 196332418 Apr 13 12:50 HITS.pool.root.1
[2026-04-13 12:52:10] -rw------- 1 boinc boinc    696320 Apr 13 12:52 result.tar.gz
12:52:11 (819193): run_atlas exited; CPU time 33851.636506
12:52:11 (819193): called boinc_finish(0)

</stderr_txt>
]]>

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