Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:13:43 (3338097): wrapper (7.7.26015): starting
10:13:43 (3338097): wrapper: running run_atlas (--nthreads 4)
[2026-04-15 10:13:43] Arguments: --nthreads 4
[2026-04-15 10:13:43] Threads: 4
[2026-04-15 10:13:43] Checking for CVMFS
[2026-04-15 10:13:43] No cvmfs_config command found, will try listing directly
[2026-04-15 10:13:43] CVMFS is ok
[2026-04-15 10:13:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-15 10:13:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-15 10:13:43] Further information can be found at the LHC@home message board.
[2026-04-15 10:13:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-15 10:13:43] Checking for apptainer binary...
[2026-04-15 10:13:43] which: no apptainer in ((null))
[2026-04-15 10:13:43] apptainer is not installed, using version from CVMFS
[2026-04-15 10:13:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-15 10:13:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-04-15 10:13:44] apptainer works
[2026-04-15 10:13:44] Set ATHENA_PROC_NUMBER=4
[2026-04-15 10:13:44] Set ATHENA_CORE_NUMBER=4
[2026-04-15 10:13:44] Starting ATLAS job with PandaID=7089336222
[2026-04-15 10:13:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-15 13:27:26]  *** The last 200 lines of the pilot log: ***
[2026-04-15 13:27:26] 2026-04-15 11:25:36,222 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/3/workernode_map.json
[2026-04-15 13:27:26] 2026-04-15 11:25:36,223 | INFO     | this job has now completed (state=finished)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,223 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,223 | INFO     | log transfer has been attempted: DONE
[2026-04-15 13:27:26] 2026-04-15 11:25:36,223 | INFO     | job 7089336222 has finished - writing final server update
[2026-04-15 13:27:26] 2026-04-15 11:25:36,224 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1150789/.job.ad'
[2026-04-15 13:27:26] 2026-04-15 11:25:36,224 | INFO     | total number of processed events: 400 (read)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,236 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7089336222/memory_monitor_summary.json (trf name=prmon)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,237 | INFO     | extracted standard info from prmon json
[2026-04-15 13:27:26] 2026-04-15 11:25:36,237 | INFO     | extracted standard memory fields from prmon json
[2026-04-15 13:27:26] 2026-04-15 11:25:36,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-15 13:27:26] 2026-04-15 11:25:36,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-15 13:27:26] 2026-04-15 11:25:36,241 | INFO     | fitting pss+swap vs Time
[2026-04-15 13:27:26] 2026-04-15 11:25:36,242 | INFO     | sum of square deviations: 2060343747.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,243 | INFO     | sum of deviations: 3445110236.999998
[2026-04-15 13:27:26] 2026-04-15 11:25:36,243 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,243 | INFO     | mean y: 2336482.1808510637
[2026-04-15 13:27:26] 2026-04-15 11:25:36,243 | INFO     | intersect: 2336482.1808510637
[2026-04-15 13:27:26] 2026-04-15 11:25:36,244 | INFO     | chi2: 1.4087942440132504
[2026-04-15 13:27:26] 2026-04-15 11:25:36,244 | INFO     | sum of square deviations: 1900284932.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,245 | INFO     | sum of deviations: 3505809812.000003
[2026-04-15 13:27:26] 2026-04-15 11:25:36,245 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,245 | INFO     | mean y: 2336540.0273224046
[2026-04-15 13:27:26] 2026-04-15 11:25:36,245 | INFO     | intersect: 2336540.0273224046
[2026-04-15 13:27:26] 2026-04-15 11:25:36,246 | INFO     | chi2: 1.4094106353449483
[2026-04-15 13:27:26] 2026-04-15 11:25:36,246 | INFO     | current chi2=1.4094106353449483 (change=-0.04375311258668713 %)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,246 | INFO     | right removable region: 182
[2026-04-15 13:27:26] 2026-04-15 11:25:36,246 | INFO     | sum of square deviations: 1900284932.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,247 | INFO     | sum of deviations: -20954425552.99998
[2026-04-15 13:27:26] 2026-04-15 11:25:36,248 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,248 | INFO     | mean y: 2359407.961748634
[2026-04-15 13:27:26] 2026-04-15 11:25:36,248 | INFO     | intersect: 2359407.961748634
[2026-04-15 13:27:26] 2026-04-15 11:25:36,248 | INFO     | chi2: 0.033935871735036684
[2026-04-15 13:27:26] 2026-04-15 11:25:36,248 | INFO     | current chi2=0.033935871735036684 (change=97.5911406595215 %)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,249 | INFO     | sum of square deviations: 1748737904.5
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | sum of deviations: -18965365460.5
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | mean y: 2357385.949438202
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | intersect: 2357385.949438202
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | chi2: 0.030963471637918898
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | current chi2=0.030963471637918898 (change=8.758873561067144 %)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,250 | INFO     | left removable region: 10
[2026-04-15 13:27:26] 2026-04-15 11:25:36,251 | INFO     | sum of square deviations: 1577789583.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,252 | INFO     | sum of deviations: -18215481053.499996
[2026-04-15 13:27:26] 2026-04-15 11:25:36,252 | INFO     | mean x (centered): 0.0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,252 | INFO     | mean y: 2358189.0058139535
[2026-04-15 13:27:26] 2026-04-15 11:25:36,252 | INFO     | intersect: 2358189.0058139535
[2026-04-15 13:27:26] 2026-04-15 11:25:36,252 | INFO     | chi2: 0.029565202033106523
[2026-04-15 13:27:26] 2026-04-15 11:25:36,253 | INFO     | current memory leak: -11.54 B/s (using 172 data points, chi2=0.03)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,253 | INFO     | could have reported an average CPU frequency of 2617 MHz (10 samples)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,253 | INFO     | ..............................
[2026-04-15 13:27:26] 2026-04-15 11:25:36,253 | INFO     | . Timing measurements:
[2026-04-15 13:27:26] 2026-04-15 11:25:36,253 | INFO     | . get job = 0 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | . initial setup = 6 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | . payload setup = 11 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | . stage-in = 0 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | . payload execution = 11468 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | . stage-out = 1 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | . log creation = 0 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,254 | INFO     | ..............................
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | 
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | job summary report
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | --------------------------------------------------
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | PanDA job id: 7089336222
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | task id: 49263191
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | errors: (none)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | pilot state: finished 
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | transexitcode: 0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,348 | INFO     | exeerrorcode: 0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | exeerrordiag: 
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | exitcode: 0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | exitmsg: OK
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | cpuconsumptiontime: 44369 s
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | nevents: 400
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | neventsw: 0
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | pid: 3355607
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | pgrp: 3355607
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | corecount: 4
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | event service: False
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | sizes: {0: 2279901, 1: 2281559, 11: 2281559, 11484: 2310925, 11485: 2320139}
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | --------------------------------------------------
[2026-04-15 13:27:26] 2026-04-15 11:25:36,349 | INFO     | 
[2026-04-15 13:27:26] 2026-04-15 11:25:36,350 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-04-15 13:27:26] 2026-04-15 11:25:36,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,370 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-15 13:27:26] 2026-04-15 11:25:36,370 | INFO     | job 7089336222 has completed (purged errors)
[2026-04-15 13:27:26] 2026-04-15 11:25:36,370 | INFO     | overall cleanup function is called
[2026-04-15 13:27:26] 2026-04-15 11:25:37,377 | INFO     | --- collectZombieJob: --- 10, [3355607]
[2026-04-15 13:27:26] 2026-04-15 11:25:37,377 | INFO     | zombie collector waiting for pid 3355607
[2026-04-15 13:27:26] 2026-04-15 11:25:37,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-15 13:27:26] 2026-04-15 11:25:37,377 | INFO     | collected zombie processes
[2026-04-15 13:27:26] 2026-04-15 11:25:37,377 | INFO     | will attempt to kill all subprocesses of pid=3355607
[2026-04-15 13:27:26] 2026-04-15 11:25:37,680 | INFO     | process IDs to be killed: [3355607] (in reverse order)
[2026-04-15 13:27:26] 2026-04-15 11:25:37,787 | WARNING  | found no corresponding commands to process id(s)
[2026-04-15 13:27:26] 2026-04-15 11:25:37,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-15 13:27:26] 2026-04-15 11:25:37,800 | INFO     | did not find any defunct processes belonging to 3355607
[2026-04-15 13:27:26] 2026-04-15 11:25:37,812 | INFO     | did not find any defunct processes belonging to 3355607
[2026-04-15 13:27:26] 2026-04-15 11:25:37,812 | INFO     | Ready for new job
[2026-04-15 13:27:26] 2026-04-15 11:25:37,814 | INFO     | **************************************
[2026-04-15 13:27:26] 2026-04-15 11:25:37,815 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-15 13:27:26] 2026-04-15 11:25:37,815 | INFO     | **************************************
[2026-04-15 13:27:26] 2026-04-15 11:25:37,815 | INFO     | 
[2026-04-15 13:27:26] 2026-04-15 11:25:37,818 | INFO     | architecture information:
[2026-04-15 13:27:26] 2026-04-15 11:25:37,819 | INFO     | executing command: cat /etc/os-release
[2026-04-15 13:27:26] 2026-04-15 11:25:37,834 | INFO     | cat /etc/os-release:
[2026-04-15 13:27:26] NAME="CentOS Linux"
[2026-04-15 13:27:26] VERSION="7 (Core)"
[2026-04-15 13:27:26] ID="centos"
[2026-04-15 13:27:26] ID_LIKE="rhel fedora"
[2026-04-15 13:27:26] VERSION_ID="7"
[2026-04-15 13:27:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-15 13:27:26] ANSI_COLOR="0;31"
[2026-04-15 13:27:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-15 13:27:26] HOME_URL="https://www.centos.org/"
[2026-04-15 13:27:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-15 13:27:26] 
[2026-04-15 13:27:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-15 13:27:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-15 13:27:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-15 13:27:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-15 13:27:26] 
[2026-04-15 13:27:26] 2026-04-15 11:25:37,835 | INFO     | **************************************
[2026-04-15 13:27:26] 2026-04-15 11:25:38,338 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-04-15 13:27:26] 2026-04-15 11:25:38,356 | INFO     | sufficient remaining disk space (54124347392 B)
[2026-04-15 13:27:26] 2026-04-15 11:25:38,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-15 13:27:26] 2026-04-15 11:25:38,357 | INFO     | current server update state: UPDATING_FINAL
[2026-04-15 13:27:26] 2026-04-15 11:25:38,357 | INFO     | update_server=False
[2026-04-15 13:27:26] 2026-04-15 11:25:38,357 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-15 13:27:26] 2026-04-15 11:25:38,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-15 13:27:26] 2026-04-15 11:25:38,616 | INFO     | all data control threads have been joined
[2026-04-15 13:27:26] 2026-04-15 11:25:38,842 | INFO     | job.realtimelogging is not enabled
[2026-04-15 13:27:26] 2026-04-15 11:25:39,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-15 13:27:26] 2026-04-15 11:25:39,154 | WARNING  | process 3355607 can no longer be monitored (due to stat problems) - aborting
[2026-04-15 13:27:26] 2026-04-15 11:25:39,362 | INFO     | [job] retrieve thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:39,413 | INFO     | [data] copytool_in thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:39,431 | INFO     | all job control threads have been joined
[2026-04-15 13:27:26] 2026-04-15 11:25:39,448 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-15 13:27:26] 2026-04-15 11:25:39,527 | INFO     | all payload control threads have been joined
[2026-04-15 13:27:26] 2026-04-15 11:25:39,619 | INFO     | [data] control thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:39,716 | INFO     | [payload] failed_post thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:39,835 | INFO     | number of running child processes to parent process 3355607: 1
[2026-04-15 13:27:26] 2026-04-15 11:25:39,835 | INFO     | maximum number of monitored processes: 6
[2026-04-15 13:27:26] 2026-04-15 11:25:39,836 | INFO     | aborting job monitoring since job object (job id=7089336222) has expired
[2026-04-15 13:27:26] 2026-04-15 11:25:39,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-15 13:27:26] 2026-04-15 11:25:39,836 | INFO     | will abort loop
[2026-04-15 13:27:26] 2026-04-15 11:25:39,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,099 | INFO     | [job] create_data_payload thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,280 | INFO     | [job] validate thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,402 | INFO     | [payload] execute_payloads thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,436 | INFO     | [job] control thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,532 | INFO     | [payload] control thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,648 | INFO     | [payload] validate_pre thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,806 | INFO     | [payload] validate_post thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:40,841 | INFO     | [job] job monitor thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:41,140 | INFO     | [data] copytool_out thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:41,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-15 13:27:26] 2026-04-15 11:25:42,362 | INFO     | [job] queue monitor thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:25:42,363 | INFO     | [data] queue_monitor thread has finished
[2026-04-15 13:27:26] 2026-04-15 11:26:08,882 | INFO     | PID=3345508 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-15 13:27:26] 2026-04-15 11:26:08,882 | INFO     | .. there are 10 such processes running
[2026-04-15 13:27:26] 2026-04-15 11:26:08,883 | INFO     | found 0 job(s) in 20 queues
[2026-04-15 13:27:26] 2026-04-15 11:26:08,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-15 13:27:26] 2026-04-15 11:26:08,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-15 13:27:26] 2026-04-15 11:26:18,495 | INFO     | [monitor] cgroup control has ended
[2026-04-15 13:27:26] 2026-04-15 11:26:18,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23132942751552)>', '<ExcThread(monitor, started 23132705666816)>']
[2026-04-15 13:27:26] 2026-04-15 11:26:19,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-15 13:27:26] 2026-04-15 11:26:19,937 | INFO     | [monitor] control thread has ended
[2026-04-15 13:27:26] 2026-04-15 11:26:23,981 | INFO     | all workflow threads have been joined
[2026-04-15 13:27:26] 2026-04-15 11:26:23,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-15 13:27:26] 2026-04-15 11:26:23,981 | INFO     | traces error code: 0
[2026-04-15 13:27:26] 2026-04-15 11:26:23,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-15 13:27:26] 2026-04-15 11:26:24,150 [wrapper] ==== pilot stdout END ====
[2026-04-15 13:27:26] 2026-04-15 11:26:24,153 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-15 13:27:26] 2026-04-15 11:26:24,155 [wrapper] pilotpid: 3345508
[2026-04-15 13:27:26] 2026-04-15 11:26:24,158 [wrapper] Pilot exit status: 0
[2026-04-15 13:27:26] 2026-04-15 11:26:24,167 [wrapper] pandaids: 7089336222
[2026-04-15 13:27:26] 2026-04-15 11:26:24,244 [wrapper] cleanup supervisor_pilot 3658762 3345509
[2026-04-15 13:27:26] 2026-04-15 11:26:24,247 [wrapper] Test setup, not cleaning
[2026-04-15 13:27:26] 2026-04-15 11:26:24,250 [wrapper] apfmon messages muted
[2026-04-15 13:27:26] 2026-04-15 11:26:24,252 [wrapper] ==== wrapper stdout END ====
[2026-04-15 13:27:26] 2026-04-15 11:26:24,255 [wrapper] ==== wrapper stderr END ====
[2026-04-15 13:27:26]  *** Error codes and diagnostics ***
[2026-04-15 13:27:26]     "exeErrorCode": 0,
[2026-04-15 13:27:26]     "pilotErrorCode": 0,
[2026-04-15 13:27:26]  *** Listing of results directory ***
[2026-04-15 13:27:26] total 419956
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc    644190 Apr 13 10:55 pilot3.tar.gz
[2026-04-15 13:27:26] -rwx------. 1 boinc boinc     36322 Apr 13 10:59 runpilot2-wrapper.sh
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc      5094 Apr 13 11:13 queuedata.json
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc       100 Apr 15 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-15 13:27:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 15 10:13 run_atlas
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc       105 Apr 15 10:13 job.xml
[2026-04-15 13:27:26] -rw-r--r--. 2 boinc boinc 222417926 Apr 15 10:13 EVNT.49263189._001948.pool.root.1
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc      6481 Apr 15 10:13 init_data.xml
[2026-04-15 13:27:26] drwxrwx--x. 2 boinc boinc      4096 Apr 15 10:13 shared
[2026-04-15 13:27:26] -rw-r--r--. 2 boinc boinc    656931 Apr 15 10:13 input.tar.gz
[2026-04-15 13:27:26] -rw-r--r--. 2 boinc boinc     15665 Apr 15 10:13 start_atlas.sh
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc         0 Apr 15 10:13 boinc_lockfile
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc      2577 Apr 15 10:13 pandaJob.out
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc    997916 Apr 15 10:13 agis_schedconf.cvmfs.json
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc       452 Apr 15 10:13 workernode_map.json
[2026-04-15 13:27:26] drwx------. 5 boinc boinc      4096 Apr 15 10:14 pilot3
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc 200799284 Apr 15 13:24 HITS.49263191._069958.pool.root.1
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc       486 Apr 15 13:25 boinc_task_state.xml
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc      1035 Apr 15 13:25 memory_monitor_summary.json
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc   1511579 Apr 15 13:25 agis_ddmendpoints.agis.ALL.json
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc    300166 Apr 15 13:25 log.49263191._069958.job.log.tgz.1
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc      6428 Apr 15 13:25 heartbeat_new.json
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc      6319 Apr 15 13:25 heartbeat.json
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc        95 Apr 15 13:26 pilot_heartbeat.json
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc      5432 Apr 15 13:26 pilotlog.txt
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc   1078231 Apr 15 13:26 log.49263191._069958.job.log.1
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc       357 Apr 15 13:26 output.list
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc       410 Apr 15 13:26 runtime_log
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc   1392640 Apr 15 13:26 result.tar.gz
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc      8827 Apr 15 13:26 runtime_log.err
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc       665 Apr 15 13:26 b08a8dd1fd69.diag
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc        26 Apr 15 13:27 wrapper_checkpoint.txt
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc      8192 Apr 15 13:27 boinc_mmap_file
[2026-04-15 13:27:26] -rw-r--r--. 1 boinc boinc     21045 Apr 15 13:27 stderr.txt
[2026-04-15 13:27:26] HITS file was successfully produced:
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc 200799284 Apr 15 13:24 shared/HITS.pool.root.1
[2026-04-15 13:27:26]  *** Contents of shared directory: ***
[2026-04-15 13:27:26] total 415332
[2026-04-15 13:27:26] -rw-r--r--. 2 boinc boinc 222417926 Apr 15 10:13 ATLAS.root_0
[2026-04-15 13:27:26] -rw-r--r--. 2 boinc boinc    656931 Apr 15 10:13 input.tar.gz
[2026-04-15 13:27:26] -rw-r--r--. 2 boinc boinc     15665 Apr 15 10:13 start_atlas.sh
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc 200799284 Apr 15 13:24 HITS.pool.root.1
[2026-04-15 13:27:26] -rw-------. 1 boinc boinc   1392640 Apr 15 13:26 result.tar.gz
13:27:28 (3338097): run_atlas exited; CPU time 44853.869648
13:27:28 (3338097): called boinc_finish(0)

</stderr_txt>
]]>

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