Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:29:42 (3836010): wrapper (7.7.26015): starting
08:29:42 (3836010): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 08:29:42] Arguments: --nthreads 8
[2026-04-13 08:29:42] Threads: 8
[2026-04-13 08:29:42] Checking for CVMFS
[2026-04-13 08:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 08:29:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 08:29:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 08:29:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 08:29:45] 2.13.3.0 11035 131241 881032 158416 2 395 21235164 32935937 60291 16776704 0 1026886130 99.777 632290640 27520 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 08:29:45] CVMFS is ok
[2026-04-13 08:29:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 08:29:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 08:29:45] Further information can be found at the LHC@home message board.
[2026-04-13 08:29:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 08:29:45] Checking for apptainer binary...
[2026-04-13 08:29:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 08:29:45] Running /usr/bin/apptainer --version
[2026-04-13 08:29:45] apptainer version 1.4.5-2.el9
[2026-04-13 08:29:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 08:29:45] lc-10-9.aglt2.org
[2026-04-13 08:29:45] apptainer works
[2026-04-13 08:29:46] Set ATHENA_PROC_NUMBER=8
[2026-04-13 08:29:46] Set ATHENA_CORE_NUMBER=8
[2026-04-13 08:29:46] Starting ATLAS job with PandaID=7089303107
[2026-04-13 08:29:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 15:44:21]  *** The last 200 lines of the pilot log: ***
[2026-04-13 15:44:21] 2026-04-13 19:43:36,033 | INFO     | .. there are 69 such processes running
[2026-04-13 15:44:21] 2026-04-13 19:43:36,165 | INFO     | job 7089303107 has state=finished
[2026-04-13 15:44:21] 2026-04-13 19:43:36,166 | INFO     | preparing for final server update for job 7089303107 in state='finished'
[2026-04-13 15:44:21] 2026-04-13 19:43:36,491 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,517 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7089303107/jobReport.json
[2026-04-13 15:44:21] 2026-04-13 19:43:36,543 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-13 15:44:21] 2026-04-13 19:43:36,544 | INFO     | this job has now completed (state=finished)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,544 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,544 | INFO     | log transfer has been attempted: DONE
[2026-04-13 15:44:21] 2026-04-13 19:43:36,544 | INFO     | job 7089303107 has finished - writing final server update
[2026-04-13 15:44:21] 2026-04-13 19:43:36,544 | INFO     | total number of processed events: 400 (read)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,678 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7089303107/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,679 | INFO     | extracted standard info from prmon json
[2026-04-13 15:44:21] 2026-04-13 19:43:36,679 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 15:44:21] 2026-04-13 19:43:36,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 15:44:21] 2026-04-13 19:43:36,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 15:44:21] 2026-04-13 19:43:36,726 | INFO     | fitting pss+swap vs Time
[2026-04-13 15:44:21] 2026-04-13 19:43:36,727 | INFO     | sum of square deviations: 23469033999.67872
[2026-04-13 15:44:21] 2026-04-13 19:43:36,764 | INFO     | sum of deviations: 96149835751.76591
[2026-04-13 15:44:21] 2026-04-13 19:43:36,765 | INFO     | mean x (centered): 0.0
[2026-04-13 15:44:21] 2026-04-13 19:43:36,765 | INFO     | mean y: 2488706.9574468085
[2026-04-13 15:44:21] 2026-04-13 19:43:36,765 | INFO     | intersect: 2488706.9574468085
[2026-04-13 15:44:21] 2026-04-13 19:43:36,765 | INFO     | chi2: 4.753702173968799
[2026-04-13 15:44:21] 2026-04-13 19:43:36,766 | INFO     | sum of square deviations: 22646653500.97854
[2026-04-13 15:44:21] 2026-04-13 19:43:36,792 | INFO     | sum of deviations: 123337867394.43533
[2026-04-13 15:44:21] 2026-04-13 19:43:36,792 | INFO     | mean x (centered): 0.0
[2026-04-13 15:44:21] 2026-04-13 19:43:36,792 | INFO     | mean y: 2493697.4784688996
[2026-04-13 15:44:21] 2026-04-13 19:43:36,793 | INFO     | intersect: 2493697.4784688996
[2026-04-13 15:44:21] 2026-04-13 19:43:36,793 | INFO     | chi2: 3.9688028043927406
[2026-04-13 15:44:21] 2026-04-13 19:43:36,793 | INFO     | current chi2=3.9688028043927406 (change=16.51132824168404 %)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,793 | INFO     | right removable region: 417
[2026-04-13 15:44:21] 2026-04-13 19:43:36,794 | INFO     | sum of square deviations: 22646527840.97856
[2026-04-13 15:44:21] 2026-04-13 19:43:36,820 | INFO     | sum of deviations: -34844690616.69379
[2026-04-13 15:44:21] 2026-04-13 19:43:36,820 | INFO     | mean x (centered): 0.0
[2026-04-13 15:44:21] 2026-04-13 19:43:36,821 | INFO     | mean y: 2512962.4354066984
[2026-04-13 15:44:21] 2026-04-13 19:43:36,821 | INFO     | intersect: 2512962.4354066984
[2026-04-13 15:44:21] 2026-04-13 19:43:36,821 | INFO     | chi2: 1.1520974619063553
[2026-04-13 15:44:21] 2026-04-13 19:43:36,822 | INFO     | current chi2=1.1520974619063553 (change=75.76420609151276 %)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,822 | INFO     | sum of square deviations: 21843463907.24953
[2026-04-13 15:44:21] 2026-04-13 19:43:36,848 | INFO     | sum of deviations: -62843180709.69005
[2026-04-13 15:44:21] 2026-04-13 19:43:36,848 | INFO     | mean x (centered): 0.0
[2026-04-13 15:44:21] 2026-04-13 19:43:36,848 | INFO     | mean y: 2518267.6198547217
[2026-04-13 15:44:21] 2026-04-13 19:43:36,849 | INFO     | intersect: 2518267.6198547217
[2026-04-13 15:44:21] 2026-04-13 19:43:36,849 | INFO     | chi2: 0.9663825199715775
[2026-04-13 15:44:21] 2026-04-13 19:43:36,849 | INFO     | current chi2=0.9663825199715775 (change=16.119724943016415 %)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,849 | INFO     | left removable region: 10
[2026-04-13 15:44:21] 2026-04-13 19:43:36,850 | INFO     | sum of square deviations: 20905274267.73452
[2026-04-13 15:44:21] 2026-04-13 19:43:36,886 | INFO     | sum of deviations: -34411783284.63885
[2026-04-13 15:44:21] 2026-04-13 19:43:36,886 | INFO     | mean x (centered): 0.0
[2026-04-13 15:44:21] 2026-04-13 19:43:36,886 | INFO     | mean y: 2523746.2555282554
[2026-04-13 15:44:21] 2026-04-13 19:43:36,886 | INFO     | intersect: 2523746.2555282554
[2026-04-13 15:44:21] 2026-04-13 19:43:36,887 | INFO     | chi2: 0.1523087490844305
[2026-04-13 15:44:21] 2026-04-13 19:43:36,887 | INFO     | current memory leak: -1.65 B/s (using 407 data points, chi2=0.15)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | could have reported an average CPU frequency of 2658 MHz (18 samples)
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | ..............................
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . Timing measurements:
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . get job = 0 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . initial setup = 37 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . payload setup = 77 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . stage-in = 0 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . payload execution = 25822 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . stage-out = 6 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,888 | INFO     | . log creation = 1 s
[2026-04-13 15:44:21] 2026-04-13 19:43:36,889 | INFO     | ..............................
[2026-04-13 15:44:21] 2026-04-13 19:43:37,519 | INFO     | 
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | job summary report
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | --------------------------------------------------
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | PanDA job id: 7089303107
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | task id: 49263200
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | errors: (none)
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | pilot state: finished 
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | transexitcode: 0
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | exeerrorcode: 0
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | exeerrordiag: 
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | exitcode: 0
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | exitmsg: OK
[2026-04-13 15:44:21] 2026-04-13 19:43:37,520 | INFO     | cpuconsumptiontime: 47035 s
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | nevents: 400
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | neventsw: 0
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | pid: 3901111
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | pgrp: 3901111
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | corecount: 8
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | event service: False
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | sizes: {0: 2279062, 1: 2279804, 2: 2281576, 13: 2281576, 25904: 2316941, 25905: 2316940, 25912: 2326122, 25915: 2326178, 25918: 2326372}
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | --------------------------------------------------
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | 
[2026-04-13 15:44:21] 2026-04-13 19:43:37,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-13 15:44:21] 2026-04-13 19:43:37,629 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,631 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 15:44:21] 2026-04-13 19:43:37,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,631 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 15:44:21] 2026-04-13 19:43:37,631 | INFO     | job 7089303107 has completed (purged errors)
[2026-04-13 15:44:21] 2026-04-13 19:43:37,631 | INFO     | overall cleanup function is called
[2026-04-13 15:44:21] 2026-04-13 19:43:38,649 | INFO     | --- collectZombieJob: --- 10, [3901111]
[2026-04-13 15:44:21] 2026-04-13 19:43:38,650 | INFO     | zombie collector waiting for pid 3901111
[2026-04-13 15:44:21] 2026-04-13 19:43:38,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 15:44:21] 2026-04-13 19:43:38,650 | INFO     | collected zombie processes
[2026-04-13 15:44:21] 2026-04-13 19:43:38,650 | INFO     | will attempt to kill all subprocesses of pid=3901111
[2026-04-13 15:44:21] 2026-04-13 19:43:40,831 | INFO     | process IDs to be killed: [3901111] (in reverse order)
[2026-04-13 15:44:21] 2026-04-13 19:43:41,854 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 15:44:21] 2026-04-13 19:43:41,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 15:44:21] 2026-04-13 19:43:42,006 | INFO     | did not find any defunct processes belonging to 3901111
[2026-04-13 15:44:21] 2026-04-13 19:43:42,203 | INFO     | did not find any defunct processes belonging to 3901111
[2026-04-13 15:44:21] 2026-04-13 19:43:42,204 | INFO     | Ready for new job
[2026-04-13 15:44:21] 2026-04-13 19:43:42,206 | INFO     | **************************************
[2026-04-13 15:44:21] 2026-04-13 19:43:42,207 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 15:44:21] 2026-04-13 19:43:42,207 | INFO     | **************************************
[2026-04-13 15:44:21] 2026-04-13 19:43:42,207 | INFO     | 
[2026-04-13 15:44:21] 2026-04-13 19:43:42,212 | INFO     | architecture information:
[2026-04-13 15:44:21] 2026-04-13 19:43:42,218 | INFO     | executing command: cat /etc/os-release
[2026-04-13 15:44:21] 2026-04-13 19:43:42,366 | INFO     | cat /etc/os-release:
[2026-04-13 15:44:21] NAME="CentOS Linux"
[2026-04-13 15:44:21] VERSION="7 (Core)"
[2026-04-13 15:44:21] ID="centos"
[2026-04-13 15:44:21] ID_LIKE="rhel fedora"
[2026-04-13 15:44:21] VERSION_ID="7"
[2026-04-13 15:44:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 15:44:21] ANSI_COLOR="0;31"
[2026-04-13 15:44:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 15:44:21] HOME_URL="https://www.centos.org/"
[2026-04-13 15:44:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 15:44:21] 
[2026-04-13 15:44:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 15:44:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 15:44:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 15:44:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 15:44:21] 
[2026-04-13 15:44:21] 2026-04-13 19:43:42,366 | INFO     | **************************************
[2026-04-13 15:44:21] 2026-04-13 19:43:42,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-13 15:44:21] 2026-04-13 19:43:42,999 | INFO     | sufficient remaining disk space (94462017536 B)
[2026-04-13 15:44:21] 2026-04-13 19:43:43,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 15:44:21] 2026-04-13 19:43:43,000 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 15:44:21] 2026-04-13 19:43:43,000 | INFO     | update_server=False
[2026-04-13 15:44:21] 2026-04-13 19:43:43,000 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 15:44:21] 2026-04-13 19:43:43,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 15:44:21] 2026-04-13 19:43:43,095 | INFO     | all data control threads have been joined
[2026-04-13 15:44:21] 2026-04-13 19:43:43,261 | INFO     | all payload control threads have been joined
[2026-04-13 15:44:21] 2026-04-13 19:43:43,281 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 15:44:21] 2026-04-13 19:43:43,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 15:44:21] 2026-04-13 19:43:43,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 15:44:21] 2026-04-13 19:43:43,282 | INFO     | will abort loop
[2026-04-13 15:44:21] 2026-04-13 19:43:44,006 | INFO     | [job] queue monitor thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,010 | INFO     | [job] retrieve thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,102 | INFO     | [data] control thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,244 | INFO     | all job control threads have been joined
[2026-04-13 15:44:21] 2026-04-13 19:43:44,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 15:44:21] 2026-04-13 19:43:44,285 | INFO     | [payload] control thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,288 | INFO     | [job] job monitor thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,397 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,431 | INFO     | [job] validate thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,591 | INFO     | [data] copytool_in thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:44,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 15:44:21] 2026-04-13 19:43:45,204 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:45,231 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:45,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:45,251 | INFO     | [job] control thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:45,508 | INFO     | [payload] failed_post thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:45,512 | INFO     | [payload] validate_post thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:46,264 | INFO     | [data] copytool_out thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:43:48,735 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 15:44:21] 2026-04-13 19:44:12,568 | INFO     | PID=3851834 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 15:44:21] 2026-04-13 19:44:12,568 | INFO     | .. there are 69 such processes running
[2026-04-13 15:44:21] 2026-04-13 19:44:12,569 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 15:44:21] 2026-04-13 19:44:12,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 15:44:21] 2026-04-13 19:44:12,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 15:44:21] 2026-04-13 19:44:13,394 | INFO     | [monitor] cgroup control has ended
[2026-04-13 15:44:21] 2026-04-13 19:44:14,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624454707008)>', '<ExcThread(monitor, started 139624001296128)>']
[2026-04-13 15:44:21] 2026-04-13 19:44:15,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 15:44:21] 2026-04-13 19:44:15,586 | INFO     | [monitor] control thread has ended
[2026-04-13 15:44:21] 2026-04-13 19:44:19,909 | INFO     | all workflow threads have been joined
[2026-04-13 15:44:21] 2026-04-13 19:44:19,910 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 15:44:21] 2026-04-13 19:44:19,910 | INFO     | traces error code: 0
[2026-04-13 15:44:21] 2026-04-13 19:44:19,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 15:44:21] 2026-04-13 19:44:20,329 [wrapper] ==== pilot stdout END ====
[2026-04-13 15:44:21] 2026-04-13 19:44:20,336 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 15:44:21] 2026-04-13 19:44:20,370 [wrapper] pilotpid: 3851834
[2026-04-13 15:44:21] 2026-04-13 19:44:20,389 [wrapper] Pilot exit status: 0
[2026-04-13 15:44:21] 2026-04-13 19:44:20,516 [wrapper] pandaids: 7089303107
[2026-04-13 15:44:21] 2026-04-13 19:44:20,754 [wrapper] cleanup supervisor_pilot 1678650 3851835
[2026-04-13 15:44:21] 2026-04-13 19:44:20,771 [wrapper] Test setup, not cleaning
[2026-04-13 15:44:21] 2026-04-13 19:44:20,831 [wrapper] apfmon messages muted
[2026-04-13 15:44:21] 2026-04-13 19:44:20,847 [wrapper] ==== wrapper stdout END ====
[2026-04-13 15:44:21] 2026-04-13 19:44:20,866 [wrapper] ==== wrapper stderr END ====
[2026-04-13 15:44:21]  *** Error codes and diagnostics ***
[2026-04-13 15:44:21]     "exeErrorCode": 0,
[2026-04-13 15:44:21]     "pilotErrorCode": 0,
[2026-04-13 15:44:21]  *** Listing of results directory ***
[2026-04-13 15:44:21] total 416100
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 04:55 pilot3.tar.gz
[2026-04-13 15:44:21] -rwx------. 1 boincer umatlas     36322 Apr 13 04:57 runpilot2-wrapper.sh
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 05:10 queuedata.json
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas       100 Apr 13 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 15:44:21] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 08:29 run_atlas
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas       105 Apr 13 08:29 job.xml
[2026-04-13 15:44:21] -rw-r--r--. 2 boincer umatlas 222495592 Apr 13 08:29 EVNT.49263198._001703.pool.root.1
[2026-04-13 15:44:21] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 08:29 start_atlas.sh
[2026-04-13 15:44:21] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 08:29 shared
[2026-04-13 15:44:21] -rw-r--r--. 2 boincer umatlas    656934 Apr 13 08:29 input.tar.gz
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas         0 Apr 13 08:29 boinc_lockfile
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas      2576 Apr 13 08:29 pandaJob.out
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas        57 Apr 13 08:29 setup.sh.local
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas    997743 Apr 13 08:30 agis_schedconf.cvmfs.json
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas       441 Apr 13 08:31 workernode_map.json
[2026-04-13 15:44:21] drwx------. 5 boincer umatlas      4096 Apr 13 08:31 pilot3
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas      6781 Apr 13 15:40 init_data.xml
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas 194972613 Apr 13 15:41 HITS.49263200._060914.pool.root.1
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas       488 Apr 13 15:41 boinc_task_state.xml
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas      1044 Apr 13 15:43 memory_monitor_summary.json
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas   1511579 Apr 13 15:43 agis_ddmendpoints.agis.ALL.json
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas    479600 Apr 13 15:43 log.49263200._060914.job.log.tgz.1
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas      6416 Apr 13 15:43 heartbeat_new.json
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas      6307 Apr 13 15:43 heartbeat.json
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas        95 Apr 13 15:44 pilot_heartbeat.json
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas      5005 Apr 13 15:44 pilotlog.txt
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 15:44 boinc_mmap_file
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas        28 Apr 13 15:44 wrapper_checkpoint.txt
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas   1794339 Apr 13 15:44 log.49263200._060914.job.log.1
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas       357 Apr 13 15:44 output.list
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas       410 Apr 13 15:44 runtime_log
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas   2293760 Apr 13 15:44 result.tar.gz
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas      8959 Apr 13 15:44 runtime_log.err
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas       656 Apr 13 15:44 b00f31c219ba.diag
[2026-04-13 15:44:21] -rw-r--r--. 1 boincer umatlas     21086 Apr 13 15:44 stderr.txt
[2026-04-13 15:44:21] HITS file was successfully produced:
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas 194972613 Apr 13 15:41 shared/HITS.pool.root.1
[2026-04-13 15:44:21]  *** Contents of shared directory: ***
[2026-04-13 15:44:21] total 410596
[2026-04-13 15:44:21] -rw-r--r--. 2 boincer umatlas 222495592 Apr 13 08:29 ATLAS.root_0
[2026-04-13 15:44:21] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 08:29 start_atlas.sh
[2026-04-13 15:44:21] -rw-r--r--. 2 boincer umatlas    656934 Apr 13 08:29 input.tar.gz
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas 194972613 Apr 13 15:41 HITS.pool.root.1
[2026-04-13 15:44:21] -rw-------. 1 boincer umatlas   2293760 Apr 13 15:44 result.tar.gz
15:44:23 (3836010): run_atlas exited; CPU time 48669.693931
15:44:23 (3836010): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN