Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:49:20 (3319630): wrapper (7.7.26015): starting
07:49:20 (3319630): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 07:49:20] Arguments: --nthreads 8
[2026-04-13 07:49:20] Threads: 8
[2026-04-13 07:49:20] Checking for CVMFS
[2026-04-13 07:49:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 07:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 07:49:22] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 07:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 07:49:24] 2.13.3.0 12442 18461 357328 158415 1 196 19721096 32935937 28636 16776704 0 29532905 99.413 48850221 14906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 07:49:24] CVMFS is ok
[2026-04-13 07:49:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 07:49:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 07:49:24] Further information can be found at the LHC@home message board.
[2026-04-13 07:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 07:49:24] Checking for apptainer binary...
[2026-04-13 07:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 07:49:24] Running /usr/bin/apptainer --version
[2026-04-13 07:49:24] apptainer version 1.4.5-3.el9
[2026-04-13 07:49:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 07:49:25] c6-12-25-4.aglt2.org
[2026-04-13 07:49:25] apptainer works
[2026-04-13 07:49:26] Set ATHENA_PROC_NUMBER=8
[2026-04-13 07:49:26] Set ATHENA_CORE_NUMBER=8
[2026-04-13 07:49:26] Starting ATLAS job with PandaID=7089335510
[2026-04-13 07:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 13:09:42]  *** The last 200 lines of the pilot log: ***
[2026-04-13 13:09:42] 2026-04-13 17:08:34,934 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7089335510/jobReport.json
[2026-04-13 13:09:42] 2026-04-13 17:08:34,962 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-04-13 13:09:42] 2026-04-13 17:08:34,986 | INFO     | this job has now completed (state=finished)
[2026-04-13 13:09:42] 2026-04-13 17:08:34,996 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 13:09:42] 2026-04-13 17:08:34,996 | INFO     | log transfer has been attempted: DONE
[2026-04-13 13:09:42] 2026-04-13 17:08:34,997 | INFO     | job 7089335510 has finished - writing final server update
[2026-04-13 13:09:42] 2026-04-13 17:08:34,998 | INFO     | total number of processed events: 400 (read)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,412 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7089335510/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,418 | INFO     | extracted standard info from prmon json
[2026-04-13 13:09:42] 2026-04-13 17:08:35,419 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 13:09:42] 2026-04-13 17:08:35,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 13:09:42] 2026-04-13 17:08:35,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 13:09:42] 2026-04-13 17:08:35,504 | INFO     | fitting pss+swap vs Time
[2026-04-13 13:09:42] 2026-04-13 17:08:35,506 | INFO     | sum of square deviations: 9327243346.263603
[2026-04-13 13:09:42] 2026-04-13 17:08:35,519 | INFO     | sum of deviations: 94603159299.71051
[2026-04-13 13:09:42] 2026-04-13 17:08:35,519 | INFO     | mean x (centered): 0.0
[2026-04-13 13:09:42] 2026-04-13 17:08:35,545 | INFO     | mean y: 2474188.4051446947
[2026-04-13 13:09:42] 2026-04-13 17:08:35,545 | INFO     | intersect: 2474188.4051446947
[2026-04-13 13:09:42] 2026-04-13 17:08:35,547 | INFO     | chi2: 3.3695934877697855
[2026-04-13 13:09:42] 2026-04-13 17:08:35,549 | INFO     | sum of square deviations: 8884587298.692747
[2026-04-13 13:09:42] 2026-04-13 17:08:35,597 | INFO     | sum of deviations: 112254267050.55553
[2026-04-13 13:09:42] 2026-04-13 17:08:35,597 | INFO     | mean x (centered): 0.0
[2026-04-13 13:09:42] 2026-04-13 17:08:35,598 | INFO     | mean y: 2480181.277777778
[2026-04-13 13:09:42] 2026-04-13 17:08:35,598 | INFO     | intersect: 2480181.277777778
[2026-04-13 13:09:42] 2026-04-13 17:08:35,599 | INFO     | chi2: 2.6861740766648126
[2026-04-13 13:09:42] 2026-04-13 17:08:35,620 | INFO     | current chi2=2.6861740766648126 (change=20.281954294650063 %)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,621 | INFO     | right removable region: 305
[2026-04-13 13:09:42] 2026-04-13 17:08:35,622 | INFO     | sum of square deviations: 8884524407.82027
[2026-04-13 13:09:42] 2026-04-13 17:08:35,657 | INFO     | sum of deviations: 18676722060.307156
[2026-04-13 13:09:42] 2026-04-13 17:08:35,657 | INFO     | mean x (centered): 0.0
[2026-04-13 13:09:42] 2026-04-13 17:08:35,658 | INFO     | mean y: 2500251.54248366
[2026-04-13 13:09:42] 2026-04-13 17:08:35,658 | INFO     | intersect: 2500251.54248366
[2026-04-13 13:09:42] 2026-04-13 17:08:35,659 | INFO     | chi2: 0.8979657183395477
[2026-04-13 13:09:42] 2026-04-13 17:08:35,678 | INFO     | current chi2=0.8979657183395477 (change=73.35091839419836 %)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,679 | INFO     | sum of square deviations: 8456038294.345544
[2026-04-13 13:09:42] 2026-04-13 17:08:35,677 | INFO     | monitor loop #638: job 0:7089335510 is in state 'finished'
[2026-04-13 13:09:42] 2026-04-13 17:08:35,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,710 | INFO     | sum of deviations: -1375195036.8737526
[2026-04-13 13:09:42] 2026-04-13 17:08:35,710 | INFO     | mean x (centered): 0.0
[2026-04-13 13:09:42] 2026-04-13 17:08:35,711 | INFO     | mean y: 2507371.4318936877
[2026-04-13 13:09:42] 2026-04-13 17:08:35,711 | INFO     | intersect: 2507371.4318936877
[2026-04-13 13:09:42] 2026-04-13 17:08:35,712 | INFO     | chi2: 0.7485221763109466
[2026-04-13 13:09:42] 2026-04-13 17:08:35,725 | INFO     | current chi2=0.7485221763109466 (change=16.64245516019711 %)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,725 | INFO     | left removable region: 10
[2026-04-13 13:09:42] 2026-04-13 17:08:35,727 | INFO     | sum of square deviations: 7960394627.037285
[2026-04-13 13:09:42] 2026-04-13 17:08:35,757 | INFO     | sum of deviations: 17102452240.362705
[2026-04-13 13:09:42] 2026-04-13 17:08:35,758 | INFO     | mean x (centered): 0.0
[2026-04-13 13:09:42] 2026-04-13 17:08:35,758 | INFO     | mean y: 2514075.7491525426
[2026-04-13 13:09:42] 2026-04-13 17:08:35,759 | INFO     | intersect: 2514075.7491525426
[2026-04-13 13:09:42] 2026-04-13 17:08:35,760 | INFO     | chi2: 0.047366740683649176
[2026-04-13 13:09:42] 2026-04-13 17:08:35,761 | INFO     | current memory leak: 2.15 B/s (using 295 data points, chi2=0.05)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,774 | INFO     | could have reported an average CPU frequency of 999 MHz (14 samples)
[2026-04-13 13:09:42] 2026-04-13 17:08:35,775 | INFO     | ..............................
[2026-04-13 13:09:42] 2026-04-13 17:08:35,775 | INFO     | . Timing measurements:
[2026-04-13 13:09:42] 2026-04-13 17:08:35,775 | INFO     | . get job = 0 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,776 | INFO     | . initial setup = 36 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,776 | INFO     | . payload setup = 43 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,776 | INFO     | . stage-in = 0 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,776 | INFO     | . payload execution = 18969 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,776 | INFO     | . stage-out = 15 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,778 | INFO     | . log creation = 1 s
[2026-04-13 13:09:42] 2026-04-13 17:08:35,778 | INFO     | ..............................
[2026-04-13 13:09:42] 2026-04-13 17:08:36,674 | INFO     | 
[2026-04-13 13:09:42] 2026-04-13 17:08:36,674 | INFO     | job summary report
[2026-04-13 13:09:42] 2026-04-13 17:08:36,674 | INFO     | --------------------------------------------------
[2026-04-13 13:09:42] 2026-04-13 17:08:36,675 | INFO     | PanDA job id: 7089335510
[2026-04-13 13:09:42] 2026-04-13 17:08:36,675 | INFO     | task id: 49263191
[2026-04-13 13:09:42] 2026-04-13 17:08:36,675 | INFO     | errors: (none)
[2026-04-13 13:09:42] 2026-04-13 17:08:36,675 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 13:09:42] 2026-04-13 17:08:36,675 | INFO     | pilot state: finished 
[2026-04-13 13:09:42] 2026-04-13 17:08:36,676 | INFO     | transexitcode: 0
[2026-04-13 13:09:42] 2026-04-13 17:08:36,676 | INFO     | exeerrorcode: 0
[2026-04-13 13:09:42] 2026-04-13 17:08:36,676 | INFO     | exeerrordiag: 
[2026-04-13 13:09:42] 2026-04-13 17:08:36,676 | INFO     | exitcode: 0
[2026-04-13 13:09:42] 2026-04-13 17:08:36,676 | INFO     | exitmsg: OK
[2026-04-13 13:09:42] 2026-04-13 17:08:36,681 | INFO     | cpuconsumptiontime: 109181 s
[2026-04-13 13:09:42] 2026-04-13 17:08:36,681 | INFO     | nevents: 400
[2026-04-13 13:09:42] 2026-04-13 17:08:36,681 | INFO     | neventsw: 0
[2026-04-13 13:09:42] 2026-04-13 17:08:36,682 | INFO     | pid: 3332459
[2026-04-13 13:09:42] 2026-04-13 17:08:36,682 | INFO     | pgrp: 3332459
[2026-04-13 13:09:42] 2026-04-13 17:08:36,682 | INFO     | corecount: 8
[2026-04-13 13:09:42] 2026-04-13 17:08:36,682 | INFO     | event service: False
[2026-04-13 13:09:42] 2026-04-13 17:08:36,683 | INFO     | sizes: {0: 2279062, 1: 2279663, 2: 2279747, 3: 2279803, 4: 2279803, 5: 2281788, 19026: 2313171, 19029: 2313170, 19049: 2322224, 19051: 2322280, 19053: 2322474}
[2026-04-13 13:09:42] 2026-04-13 17:08:36,683 | INFO     | --------------------------------------------------
[2026-04-13 13:09:42] 2026-04-13 17:08:36,683 | INFO     | 
[2026-04-13 13:09:42] 2026-04-13 17:08:36,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-13 13:09:42] 2026-04-13 17:08:36,903 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,904 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,904 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,905 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,913 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 13:09:42] 2026-04-13 17:08:36,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,913 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 13:09:42] 2026-04-13 17:08:36,914 | INFO     | job 7089335510 has completed (purged errors)
[2026-04-13 13:09:42] 2026-04-13 17:08:36,914 | INFO     | overall cleanup function is called
[2026-04-13 13:09:42] 2026-04-13 17:08:37,183 | INFO     | PID=3325629 has CPU usage=19.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-13 13:09:42] 2026-04-13 17:08:37,184 | INFO     | .. there are 32 such processes running
[2026-04-13 13:09:42] 2026-04-13 17:08:38,020 | INFO     | --- collectZombieJob: --- 10, [3332459]
[2026-04-13 13:09:42] 2026-04-13 17:08:38,020 | INFO     | zombie collector waiting for pid 3332459
[2026-04-13 13:09:42] 2026-04-13 17:08:38,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 13:09:42] 2026-04-13 17:08:38,021 | INFO     | collected zombie processes
[2026-04-13 13:09:42] 2026-04-13 17:08:38,021 | INFO     | will attempt to kill all subprocesses of pid=3332459
[2026-04-13 13:09:42] 2026-04-13 17:08:41,779 | INFO     | process IDs to be killed: [3332459] (in reverse order)
[2026-04-13 13:09:42] 2026-04-13 17:08:44,018 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 13:09:42] 2026-04-13 17:08:44,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 13:09:42] 2026-04-13 17:08:44,268 | INFO     | did not find any defunct processes belonging to 3332459
[2026-04-13 13:09:42] 2026-04-13 17:08:44,493 | INFO     | did not find any defunct processes belonging to 3332459
[2026-04-13 13:09:42] 2026-04-13 17:08:44,494 | INFO     | Ready for new job
[2026-04-13 13:09:42] 2026-04-13 17:08:44,508 | INFO     | **************************************
[2026-04-13 13:09:42] 2026-04-13 17:08:44,508 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 13:09:42] 2026-04-13 17:08:44,508 | INFO     | **************************************
[2026-04-13 13:09:42] 2026-04-13 17:08:44,509 | INFO     | 
[2026-04-13 13:09:42] 2026-04-13 17:08:44,595 | INFO     | architecture information:
[2026-04-13 13:09:42] 2026-04-13 17:08:44,610 | INFO     | executing command: cat /etc/os-release
[2026-04-13 13:09:42] 2026-04-13 17:08:44,862 | INFO     | cat /etc/os-release:
[2026-04-13 13:09:42] NAME="CentOS Linux"
[2026-04-13 13:09:42] VERSION="7 (Core)"
[2026-04-13 13:09:42] ID="centos"
[2026-04-13 13:09:42] ID_LIKE="rhel fedora"
[2026-04-13 13:09:42] VERSION_ID="7"
[2026-04-13 13:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 13:09:42] ANSI_COLOR="0;31"
[2026-04-13 13:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 13:09:42] HOME_URL="https://www.centos.org/"
[2026-04-13 13:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 13:09:42] 
[2026-04-13 13:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 13:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 13:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 13:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 13:09:42] 
[2026-04-13 13:09:42] 2026-04-13 17:08:44,863 | INFO     | **************************************
[2026-04-13 13:09:42] 2026-04-13 17:08:45,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-13 13:09:42] 2026-04-13 17:08:45,530 | INFO     | sufficient remaining disk space (93871669248 B)
[2026-04-13 13:09:42] 2026-04-13 17:08:45,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 13:09:42] 2026-04-13 17:08:45,531 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 13:09:42] 2026-04-13 17:08:45,531 | INFO     | update_server=False
[2026-04-13 13:09:42] 2026-04-13 17:08:45,532 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 13:09:42] 2026-04-13 17:08:45,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 13:09:42] 2026-04-13 17:08:45,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 13:09:42] 2026-04-13 17:08:45,702 | INFO     | all job control threads have been joined
[2026-04-13 13:09:42] 2026-04-13 17:08:45,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 13:09:42] 2026-04-13 17:08:45,832 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 13:09:42] 2026-04-13 17:08:45,833 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 13:09:42] 2026-04-13 17:08:45,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 13:09:42] 2026-04-13 17:08:45,833 | INFO     | will abort loop
[2026-04-13 13:09:42] 2026-04-13 17:08:46,005 | INFO     | all payload control threads have been joined
[2026-04-13 13:09:42] 2026-04-13 17:08:46,538 | INFO     | [job] retrieve thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,665 | INFO     | all data control threads have been joined
[2026-04-13 13:09:42] 2026-04-13 17:08:46,708 | INFO     | [job] control thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,757 | INFO     | [job] queue monitor thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,769 | INFO     | [data] copytool_in thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,771 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,840 | INFO     | [job] job monitor thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,949 | INFO     | [job] validate thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,951 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,952 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:46,953 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:47,021 | INFO     | [payload] control thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:47,223 | INFO     | [payload] failed_post thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:47,299 | INFO     | [payload] validate_post thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:47,540 | INFO     | [data] copytool_out thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:47,671 | INFO     | [data] control thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:08:49,584 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 13:09:42] 2026-04-13 17:09:17,070 | INFO     | PID=3325629 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-13 13:09:42] 2026-04-13 17:09:17,071 | INFO     | .. there are 32 such processes running
[2026-04-13 13:09:42] 2026-04-13 17:09:17,077 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 13:09:42] 2026-04-13 17:09:17,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 13:09:42] 2026-04-13 17:09:17,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 13:09:42] 2026-04-13 17:09:35,438 | INFO     | [monitor] cgroup control has ended
[2026-04-13 13:09:42] 2026-04-13 17:09:35,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703424505664)>', '<ExcThread(monitor, started 140703061505792)>']
[2026-04-13 13:09:42] 2026-04-13 17:09:36,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 13:09:42] 2026-04-13 17:09:36,300 | INFO     | [monitor] control thread has ended
[2026-04-13 13:09:42] 2026-04-13 17:09:40,855 | INFO     | all workflow threads have been joined
[2026-04-13 13:09:42] 2026-04-13 17:09:40,855 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 13:09:42] 2026-04-13 17:09:40,856 | INFO     | traces error code: 0
[2026-04-13 13:09:42] 2026-04-13 17:09:40,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 13:09:42] 2026-04-13 17:09:41,359 [wrapper] ==== pilot stdout END ====
[2026-04-13 13:09:42] 2026-04-13 17:09:41,383 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 13:09:42] 2026-04-13 17:09:41,419 [wrapper] pilotpid: 3325629
[2026-04-13 13:09:42] 2026-04-13 17:09:41,456 [wrapper] Pilot exit status: 0
[2026-04-13 13:09:42] 2026-04-13 17:09:41,660 [wrapper] pandaids: 7089335510
[2026-04-13 13:09:42] 2026-04-13 17:09:42,178 [wrapper] cleanup supervisor_pilot 4055968 3325630
[2026-04-13 13:09:42] 2026-04-13 17:09:42,189 [wrapper] Test setup, not cleaning
[2026-04-13 13:09:42] 2026-04-13 17:09:42,253 [wrapper] apfmon messages muted
[2026-04-13 13:09:42] 2026-04-13 17:09:42,309 [wrapper] ==== wrapper stdout END ====
[2026-04-13 13:09:42] 2026-04-13 17:09:42,340 [wrapper] ==== wrapper stderr END ====
[2026-04-13 13:09:42]  *** Error codes and diagnostics ***
[2026-04-13 13:09:42]     "exeErrorCode": 0,
[2026-04-13 13:09:42]     "pilotErrorCode": 0,
[2026-04-13 13:09:42]  *** Listing of results directory ***
[2026-04-13 13:09:42] total 418392
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 04:55 pilot3.tar.gz
[2026-04-13 13:09:42] -rwx------. 1 boincer umatlas     36322 Apr 13 04:57 runpilot2-wrapper.sh
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 05:08 queuedata.json
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas       100 Apr 13 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 13:09:42] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 07:49 run_atlas
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas       105 Apr 13 07:49 job.xml
[2026-04-13 13:09:42] -rw-r--r--. 2 boincer umatlas 223651361 Apr 13 07:49 EVNT.49263189._001937.pool.root.1
[2026-04-13 13:09:42] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 07:49 start_atlas.sh
[2026-04-13 13:09:42] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 07:49 shared
[2026-04-13 13:09:42] -rw-r--r--. 2 boincer umatlas    656927 Apr 13 07:49 input.tar.gz
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas         0 Apr 13 07:49 boinc_lockfile
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas      2577 Apr 13 07:49 pandaJob.out
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas        57 Apr 13 07:49 setup.sh.local
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas    997740 Apr 13 07:50 agis_schedconf.cvmfs.json
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas       438 Apr 13 07:50 workernode_map.json
[2026-04-13 13:09:42] drwx------. 5 boincer umatlas      4096 Apr 13 07:50 pilot3
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas      6777 Apr 13 13:00 init_data.xml
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas 197818214 Apr 13 13:06 HITS.49263191._069683.pool.root.1
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas       490 Apr 13 13:06 boinc_task_state.xml
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas      1044 Apr 13 13:07 memory_monitor_summary.json
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas   1511579 Apr 13 13:08 agis_ddmendpoints.agis.ALL.json
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas    388039 Apr 13 13:08 log.49263191._069683.job.log.tgz.1
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas      6422 Apr 13 13:08 heartbeat_new.json
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas      6313 Apr 13 13:08 heartbeat.json
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas        95 Apr 13 13:09 pilot_heartbeat.json
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 13:09 boinc_mmap_file
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas        29 Apr 13 13:09 wrapper_checkpoint.txt
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas      5006 Apr 13 13:09 pilotlog.txt
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas   1062039 Apr 13 13:09 log.49263191._069683.job.log.1
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas       357 Apr 13 13:09 output.list
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas       410 Apr 13 13:09 runtime_log
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas   1464320 Apr 13 13:09 result.tar.gz
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas      8974 Apr 13 13:09 runtime_log.err
[2026-04-13 13:09:42] -rw-------. 1 boincer umatlas       659 Apr 13 13:09 afdace0821f7.diag
[2026-04-13 13:09:42] -rw-r--r--. 1 boincer umatlas     21391 Apr 13 13:09 stderr.txt
[2026-04-13 13:09:43] HITS file was successfully produced:
[2026-04-13 13:09:43] -rw-------. 1 boincer umatlas 197818214 Apr 13 13:06 shared/HITS.pool.root.1
[2026-04-13 13:09:43]  *** Contents of shared directory: ***
[2026-04-13 13:09:43] total 413696
[2026-04-13 13:09:43] -rw-r--r--. 2 boincer umatlas 223651361 Apr 13 07:49 ATLAS.root_0
[2026-04-13 13:09:43] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 07:49 start_atlas.sh
[2026-04-13 13:09:43] -rw-r--r--. 2 boincer umatlas    656927 Apr 13 07:49 input.tar.gz
[2026-04-13 13:09:43] -rw-------. 1 boincer umatlas 197818214 Apr 13 13:06 HITS.pool.root.1
[2026-04-13 13:09:43] -rw-------. 1 boincer umatlas   1464320 Apr 13 13:09 result.tar.gz
13:09:44 (3319630): run_atlas exited; CPU time 110887.861893
13:09:44 (3319630): called boinc_finish(0)

</stderr_txt>
]]>

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