Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:14 (3375945): wrapper (7.7.26015): starting
08:13:14 (3375945): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 08:13:14] Arguments: --nthreads 8
[2026-04-13 08:13:14] Threads: 8
[2026-04-13 08:13:14] Checking for CVMFS
[2026-04-13 08:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 08:13:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 08:13:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 08:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 08:13:17] 2.13.3.0 12442 18485 357400 158415 1 204 19819503 32935937 27993 16776704 0 29590777 99.415 48850224 14906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 08:13:17] CVMFS is ok
[2026-04-13 08:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 08:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 08:13:17] Further information can be found at the LHC@home message board.
[2026-04-13 08:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 08:13:17] Checking for apptainer binary...
[2026-04-13 08:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 08:13:17] Running /usr/bin/apptainer --version
[2026-04-13 08:13:17] apptainer version 1.4.5-3.el9
[2026-04-13 08:13:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 08:13:18] c6-12-25-4.aglt2.org
[2026-04-13 08:13:18] apptainer works
[2026-04-13 08:13:18] Set ATHENA_PROC_NUMBER=8
[2026-04-13 08:13:18] Set ATHENA_CORE_NUMBER=8
[2026-04-13 08:13:19] Starting ATLAS job with PandaID=7089303328
[2026-04-13 08:13:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 22:37:12]  *** The last 200 lines of the pilot log: ***
[2026-04-13 22:37:12] 2026-04-14 02:35:24,716 | INFO     | job 7089303328 has finished - writing final server update
[2026-04-13 22:37:12] 2026-04-14 02:35:24,716 | INFO     | total number of processed events: 400 (read)
[2026-04-13 22:37:12] 2026-04-14 02:35:24,840 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7089303328/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 22:37:12] 2026-04-14 02:35:24,841 | INFO     | extracted standard info from prmon json
[2026-04-13 22:37:12] 2026-04-14 02:35:24,842 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 22:37:12] 2026-04-14 02:35:24,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 22:37:12] 2026-04-14 02:35:24,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 22:37:12] 2026-04-14 02:35:24,918 | INFO     | fitting pss+swap vs Time
[2026-04-13 22:37:12] 2026-04-14 02:35:24,932 | INFO     | sum of square deviations: 186425653995.40628
[2026-04-13 22:37:12] 2026-04-14 02:35:25,113 | INFO     | sum of deviations: 526874995560.4837
[2026-04-13 22:37:12] 2026-04-14 02:35:25,114 | INFO     | mean x (centered): 0.0
[2026-04-13 22:37:12] 2026-04-14 02:35:25,114 | INFO     | mean y: 2477097.914691943
[2026-04-13 22:37:12] 2026-04-14 02:35:25,114 | INFO     | intersect: 2477097.914691943
[2026-04-13 22:37:12] 2026-04-14 02:35:25,130 | INFO     | chi2: 6.093090355166599
[2026-04-13 22:37:12] 2026-04-14 02:35:25,145 | INFO     | sum of square deviations: 183132028412.5077
[2026-04-13 22:37:12] 2026-04-14 02:35:25,307 | INFO     | sum of deviations: 629169648309.5576
[2026-04-13 22:37:12] 2026-04-14 02:35:25,307 | INFO     | mean x (centered): 0.0
[2026-04-13 22:37:12] 2026-04-14 02:35:25,308 | INFO     | mean y: 2481816.5435041715
[2026-04-13 22:37:12] 2026-04-14 02:35:25,308 | INFO     | intersect: 2481816.5435041715
[2026-04-13 22:37:12] 2026-04-14 02:35:25,333 | INFO     | chi2: 4.719513495327006
[2026-04-13 22:37:12] 2026-04-14 02:35:25,334 | INFO     | current chi2=4.719513495327006 (change=22.543188756012405 %)
[2026-04-13 22:37:12] 2026-04-14 02:35:25,334 | INFO     | right removable region: 838
[2026-04-13 22:37:12] 2026-04-14 02:35:25,347 | INFO     | sum of square deviations: 183131904704.82465
[2026-04-13 22:37:12] 2026-04-14 02:35:25,578 | INFO     | sum of deviations: 283844416477.5744
[2026-04-13 22:37:12] 2026-04-14 02:35:25,578 | INFO     | mean x (centered): 0.0
[2026-04-13 22:37:12] 2026-04-14 02:35:25,597 | INFO     | mean y: 2488344.830750894
[2026-04-13 22:37:12] 2026-04-14 02:35:25,598 | INFO     | intersect: 2488344.830750894
[2026-04-13 22:37:12] 2026-04-14 02:35:25,630 | INFO     | chi2: 3.0640675700657165
[2026-04-13 22:37:12] 2026-04-14 02:35:25,631 | INFO     | current chi2=3.0640675700657165 (change=49.71242191628492 %)
[2026-04-13 22:37:12] 2026-04-14 02:35:25,633 | INFO     | sum of square deviations: 179877230702.42303
[2026-04-13 22:37:12] 2026-04-14 02:35:25,830 | INFO     | sum of deviations: 124763501082.53476
[2026-04-13 22:37:12] 2026-04-14 02:35:25,830 | INFO     | mean x (centered): 0.0
[2026-04-13 22:37:12] 2026-04-14 02:35:25,830 | INFO     | mean y: 2495795.1414868105
[2026-04-13 22:37:12] 2026-04-14 02:35:25,831 | INFO     | intersect: 2495795.1414868105
[2026-04-13 22:37:12] 2026-04-14 02:35:25,845 | INFO     | chi2: 1.8065338336440822
[2026-04-13 22:37:12] 2026-04-14 02:35:25,845 | INFO     | current chi2=1.8065338336440822 (change=41.041318693721344 %)
[2026-04-13 22:37:12] 2026-04-14 02:35:25,860 | INFO     | sum of square deviations: 176661297129.33182
[2026-04-13 22:37:12] 2026-04-14 02:35:25,975 | INFO     | sum of deviations: 68411473866.83826
[2026-04-13 22:37:12] 2026-04-14 02:35:25,976 | INFO     | mean x (centered): 0.0
[2026-04-13 22:37:12] 2026-04-14 02:35:25,976 | INFO     | mean y: 2498465.671893848
[2026-04-13 22:37:12] 2026-04-14 02:35:25,976 | INFO     | intersect: 2498465.671893848
[2026-04-13 22:37:12] 2026-04-14 02:35:25,979 | INFO     | chi2: 1.6489428842534486
[2026-04-13 22:37:12] 2026-04-14 02:35:25,980 | INFO     | current chi2=1.6489428842534486 (change=8.723387652958934 %)
[2026-04-13 22:37:12] 2026-04-14 02:35:25,980 | INFO     | left removable region: 15
[2026-04-13 22:37:12] 2026-04-14 02:35:25,983 | INFO     | sum of square deviations: 172853162653.99716
[2026-04-13 22:37:12] 2026-04-14 02:35:26,086 | INFO     | monitor loop #2316: job 0:7089303328 is in state 'finished'
[2026-04-13 22:37:12] 2026-04-14 02:35:26,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 22:37:12] 2026-04-14 02:35:26,097 | INFO     | sum of deviations: 170975114241.00128
[2026-04-13 22:37:12] 2026-04-14 02:35:26,098 | INFO     | mean x (centered): 0.0
[2026-04-13 22:37:12] 2026-04-14 02:35:26,098 | INFO     | mean y: 2503369.82746051
[2026-04-13 22:37:12] 2026-04-14 02:35:26,098 | INFO     | intersect: 2503369.82746051
[2026-04-13 22:37:12] 2026-04-14 02:35:26,112 | INFO     | chi2: 0.25247898703874316
[2026-04-13 22:37:12] 2026-04-14 02:35:26,112 | INFO     | current memory leak: 0.99 B/s (using 823 data points, chi2=0.25)
[2026-04-13 22:37:12] 2026-04-14 02:35:26,114 | INFO     | could have reported an average CPU frequency of 999 MHz (32 samples)
[2026-04-13 22:37:12] 2026-04-14 02:35:26,127 | INFO     | ..............................
[2026-04-13 22:37:12] 2026-04-14 02:35:26,127 | INFO     | . Timing measurements:
[2026-04-13 22:37:12] 2026-04-14 02:35:26,128 | INFO     | . get job = 0 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,128 | INFO     | . initial setup = 40 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,128 | INFO     | . payload setup = 86 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,128 | INFO     | . stage-in = 0 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,128 | INFO     | . payload execution = 51496 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,129 | INFO     | . stage-out = 12 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,129 | INFO     | . log creation = 1 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,129 | INFO     | ..............................
[2026-04-13 22:37:12] 2026-04-14 02:35:26,923 | INFO     | 
[2026-04-13 22:37:12] 2026-04-14 02:35:26,923 | INFO     | job summary report
[2026-04-13 22:37:12] 2026-04-14 02:35:26,924 | INFO     | --------------------------------------------------
[2026-04-13 22:37:12] 2026-04-14 02:35:26,924 | INFO     | PanDA job id: 7089303328
[2026-04-13 22:37:12] 2026-04-14 02:35:26,924 | INFO     | task id: 49263191
[2026-04-13 22:37:12] 2026-04-14 02:35:26,924 | INFO     | errors: (none)
[2026-04-13 22:37:12] 2026-04-14 02:35:26,924 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 22:37:12] 2026-04-14 02:35:26,924 | INFO     | pilot state: finished 
[2026-04-13 22:37:12] 2026-04-14 02:35:26,925 | INFO     | transexitcode: 0
[2026-04-13 22:37:12] 2026-04-14 02:35:26,925 | INFO     | exeerrorcode: 0
[2026-04-13 22:37:12] 2026-04-14 02:35:26,925 | INFO     | exeerrordiag: 
[2026-04-13 22:37:12] 2026-04-14 02:35:26,925 | INFO     | exitcode: 0
[2026-04-13 22:37:12] 2026-04-14 02:35:26,925 | INFO     | exitmsg: OK
[2026-04-13 22:37:12] 2026-04-14 02:35:26,926 | INFO     | cpuconsumptiontime: 114626 s
[2026-04-13 22:37:12] 2026-04-14 02:35:26,926 | INFO     | nevents: 400
[2026-04-13 22:37:12] 2026-04-14 02:35:26,926 | INFO     | neventsw: 0
[2026-04-13 22:37:12] 2026-04-14 02:35:26,926 | INFO     | pid: 3396659
[2026-04-13 22:37:12] 2026-04-14 02:35:26,926 | INFO     | pgrp: 3396659
[2026-04-13 22:37:12] 2026-04-14 02:35:26,926 | INFO     | corecount: 8
[2026-04-13 22:37:12] 2026-04-14 02:35:26,927 | INFO     | event service: False
[2026-04-13 22:37:12] 2026-04-14 02:35:26,927 | INFO     | sizes: {0: 2279665, 1: 2279721, 2: 2279777, 3: 2279777, 4: 2255901, 5: 2281762, 16: 2281790, 51588: 2327558, 51589: 2327557, 51602: 2336611, 51606: 2336667, 51608:
[2026-04-13 22:37:12] 2026-04-14 02:35:26,927 | INFO     | --------------------------------------------------
[2026-04-13 22:37:12] 2026-04-14 02:35:26,927 | INFO     | 
[2026-04-13 22:37:12] 2026-04-14 02:35:26,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-13 22:37:12] 2026-04-14 02:35:27,075 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,076 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,076 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,077 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 22:37:12] 2026-04-14 02:35:27,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 22:37:12] 2026-04-14 02:35:27,085 | INFO     | job 7089303328 has completed (purged errors)
[2026-04-13 22:37:12] 2026-04-14 02:35:27,085 | INFO     | overall cleanup function is called
[2026-04-13 22:37:12] 2026-04-14 02:35:28,119 | INFO     | --- collectZombieJob: --- 10, [3396659]
[2026-04-13 22:37:12] 2026-04-14 02:35:28,119 | INFO     | zombie collector waiting for pid 3396659
[2026-04-13 22:37:12] 2026-04-14 02:35:28,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 22:37:12] 2026-04-14 02:35:28,120 | INFO     | collected zombie processes
[2026-04-13 22:37:12] 2026-04-14 02:35:28,120 | INFO     | will attempt to kill all subprocesses of pid=3396659
[2026-04-13 22:37:12] 2026-04-14 02:35:33,785 | INFO     | process IDs to be killed: [3396659] (in reverse order)
[2026-04-13 22:37:12] 2026-04-14 02:35:34,728 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 22:37:12] 2026-04-14 02:35:34,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 22:37:12] 2026-04-14 02:35:34,772 | INFO     | did not find any defunct processes belonging to 3396659
[2026-04-13 22:37:12] 2026-04-14 02:35:34,927 | INFO     | did not find any defunct processes belonging to 3396659
[2026-04-13 22:37:12] 2026-04-14 02:35:34,928 | INFO     | Ready for new job
[2026-04-13 22:37:12] 2026-04-14 02:35:34,956 | INFO     | **************************************
[2026-04-13 22:37:12] 2026-04-14 02:35:34,957 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 22:37:12] 2026-04-14 02:35:34,957 | INFO     | **************************************
[2026-04-13 22:37:12] 2026-04-14 02:35:34,957 | INFO     | 
[2026-04-13 22:37:12] 2026-04-14 02:35:35,000 | INFO     | architecture information:
[2026-04-13 22:37:12] 2026-04-14 02:35:35,005 | INFO     | executing command: cat /etc/os-release
[2026-04-13 22:37:12] 2026-04-14 02:35:35,278 | INFO     | cat /etc/os-release:
[2026-04-13 22:37:12] NAME="CentOS Linux"
[2026-04-13 22:37:12] VERSION="7 (Core)"
[2026-04-13 22:37:12] ID="centos"
[2026-04-13 22:37:12] ID_LIKE="rhel fedora"
[2026-04-13 22:37:12] VERSION_ID="7"
[2026-04-13 22:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 22:37:12] ANSI_COLOR="0;31"
[2026-04-13 22:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 22:37:12] HOME_URL="https://www.centos.org/"
[2026-04-13 22:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 22:37:12] 
[2026-04-13 22:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 22:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 22:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 22:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 22:37:12] 
[2026-04-13 22:37:12] 2026-04-14 02:35:35,278 | INFO     | **************************************
[2026-04-13 22:37:12] 2026-04-14 02:35:35,782 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-13 22:37:12] 2026-04-14 02:35:35,898 | INFO     | sufficient remaining disk space (93655662592 B)
[2026-04-13 22:37:12] 2026-04-14 02:35:35,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 22:37:12] 2026-04-14 02:35:35,899 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 22:37:12] 2026-04-14 02:35:35,899 | INFO     | update_server=False
[2026-04-13 22:37:12] 2026-04-14 02:35:35,899 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 22:37:12] 2026-04-14 02:35:35,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 22:37:12] 2026-04-14 02:35:36,022 | INFO     | all payload control threads have been joined
[2026-04-13 22:37:12] 2026-04-14 02:35:36,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 22:37:12] 2026-04-14 02:35:36,053 | INFO     | all data control threads have been joined
[2026-04-13 22:37:12] 2026-04-14 02:35:36,176 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 22:37:12] 2026-04-14 02:35:36,176 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 22:37:12] 2026-04-14 02:35:36,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 22:37:12] 2026-04-14 02:35:36,177 | INFO     | will abort loop
[2026-04-13 22:37:12] 2026-04-14 02:35:36,453 | INFO     | all job control threads have been joined
[2026-04-13 22:37:12] 2026-04-14 02:35:36,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 22:37:12] 2026-04-14 02:35:36,906 | INFO     | [job] retrieve thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,028 | INFO     | [payload] control thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,063 | INFO     | [job] queue monitor thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,064 | INFO     | [data] control thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,113 | INFO     | [payload] validate_post thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,183 | INFO     | [job] job monitor thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,219 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,459 | INFO     | [job] control thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,604 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,697 | INFO     | [job] validate thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,704 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:37,956 | INFO     | [payload] failed_post thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:38,151 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:38,163 | INFO     | [data] copytool_in thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:38,789 | INFO     | [data] copytool_out thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:35:39,913 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 22:37:12] 2026-04-14 02:36:07,325 | INFO     | PID=3380666 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 22:37:12] 2026-04-14 02:36:07,325 | INFO     | .. there are 31 such processes running
[2026-04-13 22:37:12] 2026-04-14 02:36:07,328 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 22:37:12] 2026-04-14 02:36:07,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 22:37:12] 2026-04-14 02:36:07,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 22:37:12] 2026-04-14 02:36:35,454 | INFO     | [monitor] cgroup control has ended
[2026-04-13 22:37:12] 2026-04-14 02:36:36,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676413896512)>', '<ExcThread(monitor, started 140676058564352)>']
[2026-04-13 22:37:12] 2026-04-14 02:36:36,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 22:37:12] 2026-04-14 02:36:36,510 | INFO     | [monitor] control thread has ended
[2026-04-13 22:37:12] 2026-04-14 02:36:41,196 | INFO     | all workflow threads have been joined
[2026-04-13 22:37:12] 2026-04-14 02:36:41,196 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 22:37:12] 2026-04-14 02:36:41,198 | INFO     | traces error code: 0
[2026-04-13 22:37:12] 2026-04-14 02:36:41,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 22:37:12] 2026-04-14 02:36:49,195 [wrapper] ==== pilot stdout END ====
[2026-04-13 22:37:12] 2026-04-14 02:36:49,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 22:37:12] 2026-04-14 02:36:49,263 [wrapper] pilotpid: 3380666
[2026-04-13 22:37:12] 2026-04-14 02:36:49,302 [wrapper] Pilot exit status: 0
[2026-04-13 22:37:12] 2026-04-14 02:36:49,597 [wrapper] pandaids: 7089303328
[2026-04-13 22:37:12] 2026-04-14 02:36:50,393 [wrapper] cleanup supervisor_pilot 1183358 3380667
[2026-04-13 22:37:12] 2026-04-14 02:36:50,464 [wrapper] Test setup, not cleaning
[2026-04-13 22:37:12] 2026-04-14 02:36:50,532 [wrapper] apfmon messages muted
[2026-04-13 22:37:12] 2026-04-14 02:36:50,552 [wrapper] ==== wrapper stdout END ====
[2026-04-13 22:37:12] 2026-04-14 02:36:50,606 [wrapper] ==== wrapper stderr END ====
[2026-04-13 22:37:12]  *** Error codes and diagnostics ***
[2026-04-13 22:37:12]     "exeErrorCode": 0,
[2026-04-13 22:37:12]     "pilotErrorCode": 0,
[2026-04-13 22:37:12]  *** Listing of results directory ***
[2026-04-13 22:37:12] total 419020
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 04:55 pilot3.tar.gz
[2026-04-13 22:37:12] -rwx------. 1 boincer umatlas     36322 Apr 13 04:56 runpilot2-wrapper.sh
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 05:08 queuedata.json
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas       100 Apr 13 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 22:37:12] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 08:13 run_atlas
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas       105 Apr 13 08:13 job.xml
[2026-04-13 22:37:12] -rw-r--r--. 2 boincer umatlas 224464313 Apr 13 08:13 EVNT.49263189._001934.pool.root.1
[2026-04-13 22:37:12] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 08:13 start_atlas.sh
[2026-04-13 22:37:12] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 08:13 shared
[2026-04-13 22:37:12] -rw-r--r--. 2 boincer umatlas    656927 Apr 13 08:13 input.tar.gz
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas         0 Apr 13 08:13 boinc_lockfile
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 08:13 pandaJob.out
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas        57 Apr 13 08:13 setup.sh.local
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas    997740 Apr 13 08:14 agis_schedconf.cvmfs.json
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas       443 Apr 13 08:14 workernode_map.json
[2026-04-13 22:37:12] drwx------. 5 boincer umatlas      4096 Apr 13 08:15 pilot3
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas      6776 Apr 13 22:28 init_data.xml
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas 192475243 Apr 13 22:32 HITS.49263191._069609.pool.root.1
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas       489 Apr 13 22:32 boinc_task_state.xml
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas      1042 Apr 13 22:35 memory_monitor_summary.json
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas   1511579 Apr 13 22:35 agis_ddmendpoints.agis.ALL.json
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas    652540 Apr 13 22:35 log.49263191._069609.job.log.tgz.1
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas      6425 Apr 13 22:35 heartbeat_new.json
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas      6316 Apr 13 22:35 heartbeat.json
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas        95 Apr 13 22:36 pilot_heartbeat.json
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas      5005 Apr 13 22:36 pilotlog.txt
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas   3381962 Apr 13 22:36 log.49263191._069609.job.log.1
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas       357 Apr 13 22:36 output.list
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas       410 Apr 13 22:36 runtime_log
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas   4055040 Apr 13 22:36 result.tar.gz
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas       661 Apr 13 22:36 afcbf4bd4ad1.diag
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas      8974 Apr 13 22:36 runtime_log.err
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas        29 Apr 13 22:37 wrapper_checkpoint.txt
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 22:37 boinc_mmap_file
[2026-04-13 22:37:12] -rw-r--r--. 1 boincer umatlas     21115 Apr 13 22:37 stderr.txt
[2026-04-13 22:37:12] HITS file was successfully produced:
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas 192475243 Apr 13 22:32 shared/HITS.pool.root.1
[2026-04-13 22:37:12]  *** Contents of shared directory: ***
[2026-04-13 22:37:12] total 411800
[2026-04-13 22:37:12] -rw-r--r--. 2 boincer umatlas 224464313 Apr 13 08:13 ATLAS.root_0
[2026-04-13 22:37:12] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 08:13 start_atlas.sh
[2026-04-13 22:37:12] -rw-r--r--. 2 boincer umatlas    656927 Apr 13 08:13 input.tar.gz
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas 192475243 Apr 13 22:32 HITS.pool.root.1
[2026-04-13 22:37:12] -rw-------. 1 boincer umatlas   4055040 Apr 13 22:36 result.tar.gz
22:37:14 (3375945): run_atlas exited; CPU time 120748.340327
22:37:14 (3375945): called boinc_finish(0)

</stderr_txt>
]]>

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