Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:50:27 (963705): wrapper (7.7.26015): starting
00:50:27 (963705): wrapper: running run_atlas (--nthreads 3)
[2026-04-14 00:50:27] Arguments: --nthreads 3
[2026-04-14 00:50:27] Threads: 3
[2026-04-14 00:50:27] Checking for CVMFS
[2026-04-14 00:50:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-14 00:50:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-14 00:50:28] Running cvmfs_config stat atlas.cern.ch
[2026-04-14 00:50:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-14 00:50:29] 2.9.2.0 129776 5937 67372 158432 0 50 25668039 36864000 0 130560 0 3258343 99.987 226681 13069 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-14 00:50:29] CVMFS is ok
[2026-04-14 00:50:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 00:50:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 00:50:29] Further information can be found at the LHC@home message board.
[2026-04-14 00:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 00:50:29] Checking for apptainer binary...
[2026-04-14 00:50:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-14 00:50:29] Running /usr/bin/apptainer --version
[2026-04-14 00:50:29] apptainer version 1.4.1-1.1
[2026-04-14 00:50:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 00:50:29] thA335
[2026-04-14 00:50:29] apptainer works
[2026-04-14 00:50:29] Set ATHENA_PROC_NUMBER=3
[2026-04-14 00:50:29] Set ATHENA_CORE_NUMBER=3
[2026-04-14 00:50:29] Starting ATLAS job with PandaID=7089229014
[2026-04-14 00:50:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 02:28:00]  *** The last 200 lines of the pilot log: ***
[2026-04-14 02:28:00] 2026-04-14 00:27:03,857 | INFO     | Ready for new job
[2026-04-14 02:28:00] 2026-04-14 00:27:03,858 | INFO     | **************************************
[2026-04-14 02:28:00] 2026-04-14 00:27:03,858 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 02:28:00] 2026-04-14 00:27:03,858 | INFO     | **************************************
[2026-04-14 02:28:00] 2026-04-14 00:27:03,858 | INFO     | 
[2026-04-14 02:28:00] 2026-04-14 00:27:03,859 | INFO     | architecture information:
[2026-04-14 02:28:00] 2026-04-14 00:27:03,859 | INFO     | executing command: cat /etc/os-release
[2026-04-14 02:28:00] 2026-04-14 00:27:03,869 | INFO     | cat /etc/os-release:
[2026-04-14 02:28:00] NAME="CentOS Linux"
[2026-04-14 02:28:00] VERSION="7 (Core)"
[2026-04-14 02:28:00] ID="centos"
[2026-04-14 02:28:00] ID_LIKE="rhel fedora"
[2026-04-14 02:28:00] VERSION_ID="7"
[2026-04-14 02:28:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 02:28:00] ANSI_COLOR="0;31"
[2026-04-14 02:28:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 02:28:00] HOME_URL="https://www.centos.org/"
[2026-04-14 02:28:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 02:28:00] 
[2026-04-14 02:28:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 02:28:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 02:28:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 02:28:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 02:28:00] 
[2026-04-14 02:28:00] 2026-04-14 00:27:03,870 | INFO     | **************************************
[2026-04-14 02:28:00] 2026-04-14 00:27:03,875 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 02:28:00] 2026-04-14 00:27:03,911 | INFO     | number of running child processes to parent process 972190: 1
[2026-04-14 02:28:00] 2026-04-14 00:27:03,911 | INFO     | maximum number of monitored processes: 6
[2026-04-14 02:28:00] 2026-04-14 00:27:03,911 | INFO     | aborting job monitoring since job object (job id=7089229014) has expired
[2026-04-14 02:28:00] 2026-04-14 00:27:04,372 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-14 02:28:00] 2026-04-14 00:27:04,385 | INFO     | sufficient remaining disk space (836021256192 B)
[2026-04-14 02:28:00] 2026-04-14 00:27:04,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 02:28:00] 2026-04-14 00:27:04,386 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 02:28:00] 2026-04-14 00:27:04,386 | INFO     | update_server=False
[2026-04-14 02:28:00] 2026-04-14 00:27:04,386 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 02:28:00] 2026-04-14 00:27:04,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 02:28:00] 2026-04-14 00:27:04,386 | INFO     | will abort loop
[2026-04-14 02:28:00] 2026-04-14 00:27:04,674 | INFO     | all job control threads have been joined
[2026-04-14 02:28:00] 2026-04-14 00:27:05,203 | INFO     | all data control threads have been joined
[2026-04-14 02:28:00] 2026-04-14 00:27:05,392 | INFO     | [job] job monitor thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,393 | INFO     | [job] retrieve thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,410 | INFO     | [payload] validate_post thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 02:28:00] 2026-04-14 00:27:05,436 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,615 | INFO     | all payload control threads have been joined
[2026-04-14 02:28:00] 2026-04-14 00:27:05,658 | INFO     | [payload] failed_post thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,680 | INFO     | [job] control thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,700 | INFO     | [job] validate thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,813 | INFO     | [data] copytool_in thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:05,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 02:28:00] 2026-04-14 00:27:06,047 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:06,209 | INFO     | [data] control thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:06,582 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:06,621 | INFO     | [payload] control thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:07,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 02:28:00] 2026-04-14 00:27:07,437 | INFO     | [data] copytool_out thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:08,283 | INFO     | [job] queue monitor thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:09,964 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:14,817 | INFO     | job.realtimelogging is not enabled
[2026-04-14 02:28:00] 2026-04-14 00:27:15,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 02:28:00] 2026-04-14 00:27:35,366 | INFO     | PID=967765 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-14 02:28:00] 2026-04-14 00:27:35,367 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 02:28:00] 2026-04-14 00:27:35,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 02:28:00] 2026-04-14 00:27:35,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 02:28:00] 2026-04-14 00:27:53,459 | INFO     | [monitor] cgroup control has ended
[2026-04-14 02:28:00] 2026-04-14 00:27:55,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942967392064)>', '<ExcThread(monitor, started 139942088918784)>']
[2026-04-14 02:28:00] 2026-04-14 00:27:55,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 02:28:00] 2026-04-14 00:27:55,470 | INFO     | [monitor] control thread has ended
[2026-04-14 02:28:00] 2026-04-14 00:28:00,436 | INFO     | all workflow threads have been joined
[2026-04-14 02:28:00] 2026-04-14 00:28:00,437 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 02:28:00] 2026-04-14 00:28:00,437 | INFO     | traces error code: 0
[2026-04-14 02:28:00] 2026-04-14 00:28:00,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 02:28:00] 2026-04-14 00:28:00,486 [wrapper] ==== pilot stdout END ====
[2026-04-14 02:28:00] 2026-04-14 00:28:00,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 02:28:00] 2026-04-14 00:28:00,492 [wrapper] pilotpid: 967765
[2026-04-14 02:28:00] 2026-04-14 00:28:00,495 [wrapper] Pilot exit status: 0
[2026-04-14 02:28:00] 2026-04-14 00:28:00,503 [wrapper] pandaids: 7089229014
[2026-04-14 02:28:00] 2026-04-14 00:28:00,520 [wrapper] cleanup supervisor_pilot  977482 967766
[2026-04-14 02:28:00] 2026-04-14 00:28:00,523 [wrapper] Test setup, not cleaning
[2026-04-14 02:28:00] 2026-04-14 00:28:00,526 [wrapper] apfmon messages muted
[2026-04-14 02:28:00] 2026-04-14 00:28:00,529 [wrapper] ==== wrapper stdout END ====
[2026-04-14 02:28:00] 2026-04-14 00:28:00,532 [wrapper] ==== wrapper stderr END ====
[2026-04-14 02:28:00]  *** Error codes and diagnostics ***
[2026-04-14 02:28:00]     "exeErrorCode": 0,
[2026-04-14 02:28:00]     "pilotErrorCode": 0,
[2026-04-14 02:28:00]  *** Listing of results directory ***
[2026-04-14 02:28:00] total 412872
[2026-04-14 02:28:00] -rwx------ 1 boinc boinc     36322 Apr 13 10:52 runpilot2-wrapper.sh
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc      5094 Apr 13 10:55 queuedata.json
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc    644190 Apr 13 10:55 pilot3.tar.gz
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc       100 Apr 14 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 02:28:00] -rwxr-xr-x 1 boinc boinc      7986 Apr 14 00:50 run_atlas
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc       105 Apr 14 00:50 job.xml
[2026-04-14 02:28:00] -rw-r--r-- 2 boinc boinc 223538084 Apr 14 00:50 EVNT.49263198._001687.pool.root.1
[2026-04-14 02:28:00] -rw-r--r-- 2 boinc boinc    656931 Apr 14 00:50 input.tar.gz
[2026-04-14 02:28:00] -rw-r--r-- 2 boinc boinc     15665 Apr 14 00:50 start_atlas.sh
[2026-04-14 02:28:00] drwxrwx--x 2 boinc boinc      4096 Apr 14 00:50 shared
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc         0 Apr 14 00:50 boinc_setup_complete
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc      6111 Apr 14 00:50 init_data.xml
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc         0 Apr 14 00:50 boinc_lockfile
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc      2576 Apr 14 00:50 pandaJob.out
[2026-04-14 02:28:00] -rw------- 1 boinc boinc    997504 Apr 14 00:50 agis_schedconf.cvmfs.json
[2026-04-14 02:28:00] -rw------- 1 boinc boinc   1511579 Apr 14 00:50 agis_ddmendpoints.agis.ALL.json
[2026-04-14 02:28:00] -rw------- 1 boinc boinc       418 Apr 14 00:50 workernode_map.json
[2026-04-14 02:28:00] drwx------ 5 boinc boinc      4096 Apr 14 00:50 pilot3
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc       487 Apr 14 02:26 boinc_task_state.xml
[2026-04-14 02:28:00] -rw------- 1 boinc boinc 193574777 Apr 14 02:26 HITS.49263200._060495.pool.root.1
[2026-04-14 02:28:00] -rw------- 1 boinc boinc      1012 Apr 14 02:26 memory_monitor_summary.json
[2026-04-14 02:28:00] -rw------- 1 boinc boinc    252929 Apr 14 02:26 log.49263200._060495.job.log.tgz.1
[2026-04-14 02:28:00] -rw------- 1 boinc boinc      6314 Apr 14 02:27 heartbeat_new.json
[2026-04-14 02:28:00] -rw------- 1 boinc boinc      6205 Apr 14 02:27 heartbeat.json
[2026-04-14 02:28:00] -rw------- 1 boinc boinc        95 Apr 14 02:27 pilot_heartbeat.json
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc      8192 Apr 14 02:27 boinc_mmap_file
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc        27 Apr 14 02:27 wrapper_checkpoint.txt
[2026-04-14 02:28:00] -rw------- 1 boinc boinc      5227 Apr 14 02:28 pilotlog.txt
[2026-04-14 02:28:00] -rw------- 1 boinc boinc    557509 Apr 14 02:28 log.49263200._060495.job.log.1
[2026-04-14 02:28:00] -rw------- 1 boinc boinc       357 Apr 14 02:28 output.list
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc       410 Apr 14 02:28 runtime_log
[2026-04-14 02:28:00] -rw------- 1 boinc boinc    829440 Apr 14 02:28 result.tar.gz
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc      8518 Apr 14 02:28 runtime_log.err
[2026-04-14 02:28:00] -rw------- 1 boinc boinc       657 Apr 14 02:28 aed6890c0411.diag
[2026-04-14 02:28:00] -rw-r--r-- 1 boinc boinc      9892 Apr 14 02:28 stderr.txt
[2026-04-14 02:28:00] HITS file was successfully produced:
[2026-04-14 02:28:00] -rw------- 1 boinc boinc 193574777 Apr 14 02:26 shared/HITS.pool.root.1
[2026-04-14 02:28:00]  *** Contents of shared directory: ***
[2026-04-14 02:28:00] total 408816
[2026-04-14 02:28:00] -rw-r--r-- 2 boinc boinc 223538084 Apr 14 00:50 ATLAS.root_0
[2026-04-14 02:28:00] -rw-r--r-- 2 boinc boinc    656931 Apr 14 00:50 input.tar.gz
[2026-04-14 02:28:00] -rw-r--r-- 2 boinc boinc     15665 Apr 14 00:50 start_atlas.sh
[2026-04-14 02:28:00] -rw------- 1 boinc boinc 193574777 Apr 14 02:26 HITS.pool.root.1
[2026-04-14 02:28:00] -rw------- 1 boinc boinc    829440 Apr 14 02:28 result.tar.gz
02:28:02 (963705): run_atlas exited; CPU time 16312.693591
02:28:02 (963705): called boinc_finish(0)

</stderr_txt>
]]>

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