Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:44:40 (678744): wrapper (7.7.26015): starting
04:44:40 (678744): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 04:44:40] Arguments: --nthreads 8
[2026-04-13 04:44:40] Threads: 8
[2026-04-13 04:44:40] Checking for CVMFS
[2026-04-13 04:44:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 04:44:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 04:44:41] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 04:44:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 04:44:42] 2.13.3.0 12210 157414 236944 158409 2 674 32283920 40960000 60595 16776704 0 1421151479 99.771 926941323 43331 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-13 04:44:42] CVMFS is ok
[2026-04-13 04:44:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 04:44:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 04:44:42] Further information can be found at the LHC@home message board.
[2026-04-13 04:44:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 04:44:42] Checking for apptainer binary...
[2026-04-13 04:44:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 04:44:42] Running /usr/bin/apptainer --version
[2026-04-13 04:44:42] apptainer version 1.4.5-2.el9
[2026-04-13 04:44:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 04:44:42] c-208-37.aglt2.org
[2026-04-13 04:44:42] apptainer works
[2026-04-13 04:44:42] Set ATHENA_PROC_NUMBER=8
[2026-04-13 04:44:42] Set ATHENA_CORE_NUMBER=8
[2026-04-13 04:44:42] Starting ATLAS job with PandaID=7089023485
[2026-04-13 04:44:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 06:41:04]  *** The last 200 lines of the pilot log: ***
[2026-04-13 06:41:04] 2026-04-13 10:40:13,847 | INFO     | log transfer has been attempted: DONE
[2026-04-13 06:41:04] 2026-04-13 10:40:13,847 | INFO     | job 7089023485 has finished - writing final server update
[2026-04-13 06:41:04] 2026-04-13 10:40:13,847 | INFO     | total number of processed events: 400 (read)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,936 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-7089023485/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,936 | INFO     | extracted standard info from prmon json
[2026-04-13 06:41:04] 2026-04-13 10:40:13,936 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 06:41:04] 2026-04-13 10:40:13,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 06:41:04] 2026-04-13 10:40:13,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 06:41:04] 2026-04-13 10:40:13,946 | INFO     | fitting pss+swap vs Time
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | sum of square deviations: 401534819.9633025
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | sum of deviations: 51351713678.614655
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | mean x (centered): 0.0
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | mean y: 2341203.1926605506
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | intersect: 2341203.1926605506
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | chi2: 6.746817583029454
[2026-04-13 06:41:04] 2026-04-13 10:40:13,947 | INFO     | sum of square deviations: 348771649.96153814
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | sum of deviations: 48743246170.7885
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | mean x (centered): 0.0
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | mean y: 2333667.355769231
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | intersect: 2333667.355769231
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | chi2: 6.783411324556783
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | current chi2=6.783411324556783 (change=-0.5423852220248985 %)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | right removable region: 103
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | sum of square deviations: 348770429.96153814
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | sum of deviations: 14259256294.78846
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | mean x (centered): 0.0
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | mean y: 2448330.355769231
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | intersect: 2448330.355769231
[2026-04-13 06:41:04] 2026-04-13 10:40:13,948 | INFO     | chi2: 1.2032932655396014
[2026-04-13 06:41:04] 2026-04-13 10:40:13,949 | INFO     | current chi2=1.2032932655396014 (change=82.16502446181005 %)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,949 | INFO     | sum of square deviations: 300843339.95959556
[2026-04-13 06:41:04] 2026-04-13 10:40:13,970 | INFO     | sum of deviations: -1203496437.3636365
[2026-04-13 06:41:04] 2026-04-13 10:40:13,970 | INFO     | mean x (centered): 0.0
[2026-04-13 06:41:04] 2026-04-13 10:40:13,970 | INFO     | mean y: 2496679.1818181816
[2026-04-13 06:41:04] 2026-04-13 10:40:13,970 | INFO     | intersect: 2496679.1818181816
[2026-04-13 06:41:04] 2026-04-13 10:40:13,970 | INFO     | chi2: 0.004968525216145662
[2026-04-13 06:41:04] 2026-04-13 10:40:13,970 | INFO     | current chi2=0.004968525216145662 (change=99.58708941881116 %)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | sum of square deviations: 257520987.45744672
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | sum of deviations: -1035081758.2872342
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | mean x (centered): 0.0
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | mean y: 2496042.3936170214
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | intersect: 2496042.3936170214
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | chi2: 0.004278735286329496
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | current chi2=0.004278735286329496 (change=13.883192694174767 %)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | left removable region: 15
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | sum of square deviations: 211286433.9545459
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | sum of deviations: -1057421244.318182
[2026-04-13 06:41:04] 2026-04-13 10:40:13,971 | INFO     | mean x (centered): 0.0
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | mean y: 2495968.659090909
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | intersect: 2495968.659090909
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | chi2: 0.004016940293815969
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | current memory leak: -5.00 B/s (using 88 data points, chi2=0.00)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | could have reported an average CPU frequency of 3793 MHz (7 samples)
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | ..............................
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . Timing measurements:
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . get job = 0 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . initial setup = 41 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . payload setup = 121 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . stage-in = 0 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . payload execution = 6668 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . stage-out = 2 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,972 | INFO     | . log creation = 0 s
[2026-04-13 06:41:04] 2026-04-13 10:40:13,973 | INFO     | ..............................
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | 
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | job summary report
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | --------------------------------------------------
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | PanDA job id: 7089023485
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | task id: 49263200
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | errors: (none)
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | pilot state: finished 
[2026-04-13 06:41:04] 2026-04-13 10:40:14,303 | INFO     | transexitcode: 0
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | exeerrorcode: 0
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | exeerrordiag: 
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | exitcode: 0
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | exitmsg: OK
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | cpuconsumptiontime: 23105 s
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | nevents: 400
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | neventsw: 0
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | pid: 708865
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | pgrp: 708865
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | corecount: 8
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | event service: False
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | sizes: {0: 2279720, 1: 2281549, 12: 2281549, 6794: 2308738, 6795: 2308737, 6797: 2317977, 6798: 2318115}
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | --------------------------------------------------
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | 
[2026-04-13 06:41:04] 2026-04-13 10:40:14,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | job 7089023485 has completed (purged errors)
[2026-04-13 06:41:04] 2026-04-13 10:40:14,363 | INFO     | overall cleanup function is called
[2026-04-13 06:41:04] 2026-04-13 10:40:15,387 | INFO     | --- collectZombieJob: --- 10, [708865]
[2026-04-13 06:41:04] 2026-04-13 10:40:15,387 | INFO     | zombie collector waiting for pid 708865
[2026-04-13 06:41:04] 2026-04-13 10:40:15,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 06:41:04] 2026-04-13 10:40:15,387 | INFO     | collected zombie processes
[2026-04-13 06:41:04] 2026-04-13 10:40:15,387 | INFO     | will attempt to kill all subprocesses of pid=708865
[2026-04-13 06:41:04] 2026-04-13 10:40:17,740 | INFO     | process IDs to be killed: [708865] (in reverse order)
[2026-04-13 06:41:04] 2026-04-13 10:40:18,351 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 06:41:04] 2026-04-13 10:40:18,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 06:41:04] 2026-04-13 10:40:18,412 | INFO     | did not find any defunct processes belonging to 708865
[2026-04-13 06:41:04] 2026-04-13 10:40:18,469 | INFO     | did not find any defunct processes belonging to 708865
[2026-04-13 06:41:04] 2026-04-13 10:40:18,469 | INFO     | Ready for new job
[2026-04-13 06:41:04] 2026-04-13 10:40:18,474 | INFO     | **************************************
[2026-04-13 06:41:04] 2026-04-13 10:40:18,475 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 06:41:04] 2026-04-13 10:40:18,475 | INFO     | **************************************
[2026-04-13 06:41:04] 2026-04-13 10:40:18,475 | INFO     | 
[2026-04-13 06:41:04] 2026-04-13 10:40:18,483 | INFO     | architecture information:
[2026-04-13 06:41:04] 2026-04-13 10:40:18,483 | INFO     | executing command: cat /etc/os-release
[2026-04-13 06:41:04] 2026-04-13 10:40:18,622 | INFO     | cat /etc/os-release:
[2026-04-13 06:41:04] NAME="CentOS Linux"
[2026-04-13 06:41:04] VERSION="7 (Core)"
[2026-04-13 06:41:04] ID="centos"
[2026-04-13 06:41:04] ID_LIKE="rhel fedora"
[2026-04-13 06:41:04] VERSION_ID="7"
[2026-04-13 06:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 06:41:04] ANSI_COLOR="0;31"
[2026-04-13 06:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 06:41:04] HOME_URL="https://www.centos.org/"
[2026-04-13 06:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 06:41:04] 
[2026-04-13 06:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 06:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 06:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 06:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 06:41:04] 
[2026-04-13 06:41:04] 2026-04-13 10:40:18,623 | INFO     | **************************************
[2026-04-13 06:41:04] 2026-04-13 10:40:19,126 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2026-04-13 06:41:04] 2026-04-13 10:40:19,219 | INFO     | sufficient remaining disk space (169334538240 B)
[2026-04-13 06:41:04] 2026-04-13 10:40:19,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 06:41:04] 2026-04-13 10:40:19,220 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 06:41:04] 2026-04-13 10:40:19,220 | INFO     | update_server=False
[2026-04-13 06:41:04] 2026-04-13 10:40:19,220 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 06:41:04] 2026-04-13 10:40:19,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 06:41:04] 2026-04-13 10:40:19,279 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 06:41:04] 2026-04-13 10:40:19,279 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 06:41:04] 2026-04-13 10:40:19,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 06:41:04] 2026-04-13 10:40:19,280 | INFO     | will abort loop
[2026-04-13 06:41:04] 2026-04-13 10:40:19,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 06:41:04] 2026-04-13 10:40:19,355 | INFO     | all data control threads have been joined
[2026-04-13 06:41:04] 2026-04-13 10:40:19,764 | INFO     | all payload control threads have been joined
[2026-04-13 06:41:04] 2026-04-13 10:40:19,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 06:41:04] 2026-04-13 10:40:20,226 | INFO     | [job] retrieve thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,285 | INFO     | [job] job monitor thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,325 | INFO     | [job] queue monitor thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,359 | INFO     | [payload] validate_post thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,361 | INFO     | [data] control thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,560 | INFO     | all job control threads have been joined
[2026-04-13 06:41:04] 2026-04-13 10:40:20,577 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,581 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,638 | INFO     | [payload] failed_post thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,768 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,772 | INFO     | [payload] control thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:20,778 | INFO     | [job] validate thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:21,227 | INFO     | [data] copytool_out thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:21,565 | INFO     | [data] copytool_in thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:21,566 | INFO     | [job] control thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:23,923 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:29,891 | INFO     | job.realtimelogging is not enabled
[2026-04-13 06:41:04] 2026-04-13 10:40:30,897 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 06:41:04] 2026-04-13 10:40:48,919 | INFO     | PID=689373 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-13 06:41:04] 2026-04-13 10:40:48,919 | INFO     | .. there are 65 such processes running
[2026-04-13 06:41:04] 2026-04-13 10:40:48,920 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 06:41:04] 2026-04-13 10:40:48,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 06:41:04] 2026-04-13 10:40:48,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 06:41:04] 2026-04-13 10:40:55,372 | INFO     | [monitor] cgroup control has ended
[2026-04-13 06:41:04] 2026-04-13 10:40:56,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377882978112)>', '<ExcThread(monitor, started 140377449297664)>']
[2026-04-13 06:41:04] 2026-04-13 10:40:56,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 06:41:04] 2026-04-13 10:40:56,988 | INFO     | [monitor] control thread has ended
[2026-04-13 06:41:04] 2026-04-13 10:41:01,943 | INFO     | all workflow threads have been joined
[2026-04-13 06:41:04] 2026-04-13 10:41:01,945 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 06:41:04] 2026-04-13 10:41:01,946 | INFO     | traces error code: 0
[2026-04-13 06:41:04] 2026-04-13 10:41:01,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 06:41:04] 2026-04-13 10:41:03,010 [wrapper] ==== pilot stdout END ====
[2026-04-13 06:41:04] 2026-04-13 10:41:03,105 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 06:41:04] 2026-04-13 10:41:03,119 [wrapper] pilotpid: 689373
[2026-04-13 06:41:04] 2026-04-13 10:41:03,170 [wrapper] Pilot exit status: 0
[2026-04-13 06:41:04] 2026-04-13 10:41:03,330 [wrapper] pandaids: 7089023485
[2026-04-13 06:41:04] 2026-04-13 10:41:04,025 [wrapper] cleanup supervisor_pilot 1297078 689374
[2026-04-13 06:41:04] 2026-04-13 10:41:04,050 [wrapper] Test setup, not cleaning
[2026-04-13 06:41:04] 2026-04-13 10:41:04,088 [wrapper] apfmon messages muted
[2026-04-13 06:41:04] 2026-04-13 10:41:04,115 [wrapper] ==== wrapper stdout END ====
[2026-04-13 06:41:04] 2026-04-13 10:41:04,154 [wrapper] ==== wrapper stderr END ====
[2026-04-13 06:41:04]  *** Error codes and diagnostics ***
[2026-04-13 06:41:04]     "exeErrorCode": 0,
[2026-04-13 06:41:04]     "pilotErrorCode": 0,
[2026-04-13 06:41:04]  *** Listing of results directory ***
[2026-04-13 06:41:04] total 408308
[2026-04-13 06:41:04] -rwx------. 1 boincer umatlas     36322 Apr 13 01:36 runpilot2-wrapper.sh
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 01:37 pilot3.tar.gz
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 01:40 queuedata.json
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas       100 Apr 13 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 06:41:04] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 04:44 run_atlas
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas       105 Apr 13 04:44 job.xml
[2026-04-13 06:41:04] -rw-r--r--. 2 boincer umatlas 220885586 Apr 13 04:44 EVNT.49263198._001642.pool.root.1
[2026-04-13 06:41:04] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 04:44 start_atlas.sh
[2026-04-13 06:41:04] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 04:44 shared
[2026-04-13 06:41:04] -rw-r--r--. 2 boincer umatlas    656925 Apr 13 04:44 input.tar.gz
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas         0 Apr 13 04:44 boinc_lockfile
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas      2576 Apr 13 04:44 pandaJob.out
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas        57 Apr 13 04:44 setup.sh.local
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas    997783 Apr 13 04:46 agis_schedconf.cvmfs.json
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas   1511579 Apr 13 04:46 agis_ddmendpoints.agis.ALL.json
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas       432 Apr 13 04:46 workernode_map.json
[2026-04-13 06:41:04] drwx------. 5 boincer umatlas      4096 Apr 13 04:46 pilot3
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas 191322928 Apr 13 06:39 HITS.49263200._059324.pool.root.1
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas       487 Apr 13 06:39 boinc_task_state.xml
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas      1049 Apr 13 06:40 memory_monitor_summary.json
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas    327751 Apr 13 06:40 log.49263200._059324.job.log.tgz.1
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas      6381 Apr 13 06:40 heartbeat_new.json
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas      6272 Apr 13 06:40 heartbeat.json
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas      7102 Apr 13 06:40 init_data.xml
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas        95 Apr 13 06:40 pilot_heartbeat.json
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas        27 Apr 13 06:41 wrapper_checkpoint.txt
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 06:41 boinc_mmap_file
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas      5078 Apr 13 06:41 pilotlog.txt
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas    586090 Apr 13 06:41 log.49263200._059324.job.log.1
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas       357 Apr 13 06:41 output.list
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas       410 Apr 13 06:41 runtime_log
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas    931840 Apr 13 06:41 result.tar.gz
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas      8981 Apr 13 06:41 runtime_log.err
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas       656 Apr 13 06:41 80edbe22e895.diag
[2026-04-13 06:41:04] -rw-r--r--. 1 boincer umatlas     20998 Apr 13 06:41 stderr.txt
[2026-04-13 06:41:04] HITS file was successfully produced:
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas 191322928 Apr 13 06:39 shared/HITS.pool.root.1
[2026-04-13 06:41:04]  *** Contents of shared directory: ***
[2026-04-13 06:41:04] total 404132
[2026-04-13 06:41:04] -rw-r--r--. 2 boincer umatlas 220885586 Apr 13 04:44 ATLAS.root_0
[2026-04-13 06:41:04] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 04:44 start_atlas.sh
[2026-04-13 06:41:04] -rw-r--r--. 2 boincer umatlas    656925 Apr 13 04:44 input.tar.gz
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas 191322928 Apr 13 06:39 HITS.pool.root.1
[2026-04-13 06:41:04] -rw-------. 1 boincer umatlas    931840 Apr 13 06:41 result.tar.gz
06:41:06 (678744): run_atlas exited; CPU time 23368.254989
06:41:06 (678744): called boinc_finish(0)

</stderr_txt>
]]>

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