Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:42:47 (26888): wrapper (7.7.26015): starting
19:42:47 (26888): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 19:42:47] Arguments: --nthreads 8
[2026-04-13 19:42:47] Threads: 8
[2026-04-13 19:42:47] Checking for CVMFS
[2026-04-13 19:42:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 19:42:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 19:42:50] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 19:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 19:42:51] 2.11.2.0 23645 17527 100716 158424 1 54 18023187 25165825 4493 130560 0 6016747 99.776 3827542 6248 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-13 19:42:51] CVMFS is ok
[2026-04-13 19:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 19:42:51] Checking for apptainer binary...
[2026-04-13 19:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 19:42:51] Running /usr/bin/apptainer --version
[2026-04-13 19:42:51] apptainer version 1.3.2-1.el7
[2026-04-13 19:42:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 19:43:02] cg-vwn457.simple-grid.lan
[2026-04-13 19:43:02] apptainer works
[2026-04-13 19:43:02] Set ATHENA_PROC_NUMBER=8
[2026-04-13 19:43:02] Set ATHENA_CORE_NUMBER=8
[2026-04-13 19:43:02] Starting ATLAS job with PandaID=7089085993
[2026-04-13 19:43:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 23:49:41]  *** The last 200 lines of the pilot log: ***
[2026-04-13 23:49:41] 2026-04-13 21:49:05,257 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-13 23:49:41] 2026-04-13 21:49:05,882 | INFO     | monitor loop #1124: job 0:7089085993 is in state 'finished'
[2026-04-13 23:49:41] 2026-04-13 21:49:05,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,046 | INFO     | job 7089085993 has state=finished
[2026-04-13 23:49:41] 2026-04-13 21:49:07,046 | INFO     | preparing for final server update for job 7089085993 in state='finished'
[2026-04-13 23:49:41] 2026-04-13 21:49:07,046 | INFO     | reading metadata from: /var/lib/boinc/slots/16/PanDA_Pilot-7089085993/jobReport.json
[2026-04-13 23:49:41] 2026-04-13 21:49:07,049 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/16/workernode_map.json
[2026-04-13 23:49:41] 2026-04-13 21:49:07,049 | INFO     | this job has now completed (state=finished)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,049 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,049 | INFO     | log transfer has been attempted: DONE
[2026-04-13 23:49:41] 2026-04-13 21:49:07,050 | INFO     | job 7089085993 has finished - writing final server update
[2026-04-13 23:49:41] 2026-04-13 21:49:07,050 | INFO     | total number of processed events: 400 (read)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,052 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7089085993/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,052 | INFO     | extracted standard info from prmon json
[2026-04-13 23:49:41] 2026-04-13 21:49:07,053 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 23:49:41] 2026-04-13 21:49:07,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 23:49:41] 2026-04-13 21:49:07,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 23:49:41] 2026-04-13 21:49:07,058 | INFO     | fitting pss+swap vs Time
[2026-04-13 23:49:41] 2026-04-13 21:49:07,059 | INFO     | sum of square deviations: 3871990738.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,061 | INFO     | sum of deviations: 81856448054.50003
[2026-04-13 23:49:41] 2026-04-13 21:49:07,061 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,061 | INFO     | mean y: 2428088.1939655175
[2026-04-13 23:49:41] 2026-04-13 21:49:07,061 | INFO     | intersect: 2428088.1939655175
[2026-04-13 23:49:41] 2026-04-13 21:49:07,062 | INFO     | chi2: 4.937829317768369
[2026-04-13 23:49:41] 2026-04-13 21:49:07,062 | INFO     | sum of square deviations: 3627000098.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,064 | INFO     | sum of deviations: 95189609339.00002
[2026-04-13 23:49:41] 2026-04-13 21:49:07,067 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,067 | INFO     | mean y: 2436220.960352423
[2026-04-13 23:49:41] 2026-04-13 21:49:07,067 | INFO     | intersect: 2436220.960352423
[2026-04-13 23:49:41] 2026-04-13 21:49:07,067 | INFO     | chi2: 4.1922188269661795
[2026-04-13 23:49:41] 2026-04-13 21:49:07,068 | INFO     | current chi2=4.1922188269661795 (change=15.09996483918899 %)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,068 | INFO     | right removable region: 226
[2026-04-13 23:49:41] 2026-04-13 21:49:07,068 | INFO     | sum of square deviations: 3627000098.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,070 | INFO     | sum of deviations: 9105367703.000004
[2026-04-13 23:49:41] 2026-04-13 21:49:07,070 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,070 | INFO     | mean y: 2473287.1850220263
[2026-04-13 23:49:41] 2026-04-13 21:49:07,070 | INFO     | intersect: 2473287.1850220263
[2026-04-13 23:49:41] 2026-04-13 21:49:07,071 | INFO     | chi2: 1.0561478629182421
[2026-04-13 23:49:41] 2026-04-13 21:49:07,071 | INFO     | current chi2=1.0561478629182421 (change=78.61109011772072 %)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,071 | INFO     | sum of square deviations: 3392567795.5
[2026-04-13 23:49:41] 2026-04-13 21:49:07,073 | INFO     | sum of deviations: -4956714332.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,073 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,073 | INFO     | mean y: 2482332.936936937
[2026-04-13 23:49:41] 2026-04-13 21:49:07,073 | INFO     | intersect: 2482332.936936937
[2026-04-13 23:49:41] 2026-04-13 21:49:07,074 | INFO     | chi2: 0.7996608554055855
[2026-04-13 23:49:41] 2026-04-13 21:49:07,074 | INFO     | current chi2=0.7996608554055855 (change=24.28514193116458 %)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,074 | INFO     | left removable region: 10
[2026-04-13 23:49:41] 2026-04-13 21:49:07,075 | INFO     | sum of square deviations: 3124858590.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,076 | INFO     | sum of deviations: 9585779211.500002
[2026-04-13 23:49:41] 2026-04-13 21:49:07,077 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,077 | INFO     | mean y: 2492045.560185185
[2026-04-13 23:49:41] 2026-04-13 21:49:07,077 | INFO     | intersect: 2492045.560185185
[2026-04-13 23:49:41] 2026-04-13 21:49:07,077 | INFO     | chi2: 0.0056468955311184425
[2026-04-13 23:49:41] 2026-04-13 21:49:07,078 | INFO     | current memory leak: 3.07 B/s (using 216 data points, chi2=0.01)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,078 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,078 | INFO     | ..............................
[2026-04-13 23:49:41] 2026-04-13 21:49:07,078 | INFO     | . Timing measurements:
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . get job = 0 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . initial setup = 97 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . payload setup = 230 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . stage-in = 0 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . payload execution = 14206 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . stage-out = 1 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | . log creation = 0 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,079 | INFO     | ..............................
[2026-04-13 23:49:41] 2026-04-13 21:49:07,332 | INFO     | 
[2026-04-13 23:49:41] 2026-04-13 21:49:07,332 | INFO     | job summary report
[2026-04-13 23:49:41] 2026-04-13 21:49:07,332 | INFO     | --------------------------------------------------
[2026-04-13 23:49:41] 2026-04-13 21:49:07,332 | INFO     | PanDA job id: 7089085993
[2026-04-13 23:49:41] 2026-04-13 21:49:07,332 | INFO     | task id: 49263200
[2026-04-13 23:49:41] 2026-04-13 21:49:07,332 | INFO     | errors: (none)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | pilot state: finished 
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | transexitcode: 0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | exeerrorcode: 0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | exeerrordiag: 
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | exitcode: 0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | exitmsg: OK
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | cpuconsumptiontime: 52633 s
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | nevents: 400
[2026-04-13 23:49:41] 2026-04-13 21:49:07,333 | INFO     | neventsw: 0
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | pid: 3077
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | pgrp: 3077
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | corecount: 8
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | event service: False
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | sizes: {0: 2279720, 1: 2280121, 2: 2281549, 12: 2281577, 14441: 2312058, 14442: 2321058, 14443: 2321242, 14445: 2321436}
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | --------------------------------------------------
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | 
[2026-04-13 23:49:41] 2026-04-13 21:49:07,334 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-04-13 23:49:41] 2026-04-13 21:49:07,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | job 7089085993 has completed (purged errors)
[2026-04-13 23:49:41] 2026-04-13 21:49:07,361 | INFO     | overall cleanup function is called
[2026-04-13 23:49:41] 2026-04-13 21:49:08,370 | INFO     | --- collectZombieJob: --- 10, [3077]
[2026-04-13 23:49:41] 2026-04-13 21:49:08,370 | INFO     | zombie collector waiting for pid 3077
[2026-04-13 23:49:41] 2026-04-13 21:49:08,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 23:49:41] 2026-04-13 21:49:08,370 | INFO     | collected zombie processes
[2026-04-13 23:49:41] 2026-04-13 21:49:08,370 | INFO     | will attempt to kill all subprocesses of pid=3077
[2026-04-13 23:49:41] 2026-04-13 21:49:08,466 | INFO     | process IDs to be killed: [3077] (in reverse order)
[2026-04-13 23:49:41] 2026-04-13 21:49:08,520 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 23:49:41] 2026-04-13 21:49:08,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 23:49:41] 2026-04-13 21:49:08,524 | INFO     | did not find any defunct processes belonging to 3077
[2026-04-13 23:49:41] 2026-04-13 21:49:08,526 | INFO     | did not find any defunct processes belonging to 3077
[2026-04-13 23:49:41] 2026-04-13 21:49:08,527 | INFO     | Ready for new job
[2026-04-13 23:49:41] 2026-04-13 21:49:08,529 | INFO     | **************************************
[2026-04-13 23:49:41] 2026-04-13 21:49:08,529 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 23:49:41] 2026-04-13 21:49:08,529 | INFO     | **************************************
[2026-04-13 23:49:41] 2026-04-13 21:49:08,529 | INFO     | 
[2026-04-13 23:49:41] 2026-04-13 21:49:08,530 | INFO     | pilot is running in a VM
[2026-04-13 23:49:41] 2026-04-13 21:49:08,530 | INFO     | architecture information:
[2026-04-13 23:49:41] 2026-04-13 21:49:08,530 | INFO     | executing command: cat /etc/os-release
[2026-04-13 23:49:41] 2026-04-13 21:49:08,548 | INFO     | cat /etc/os-release:
[2026-04-13 23:49:41] NAME="CentOS Linux"
[2026-04-13 23:49:41] VERSION="7 (Core)"
[2026-04-13 23:49:41] ID="centos"
[2026-04-13 23:49:41] ID_LIKE="rhel fedora"
[2026-04-13 23:49:41] VERSION_ID="7"
[2026-04-13 23:49:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 23:49:41] ANSI_COLOR="0;31"
[2026-04-13 23:49:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 23:49:41] HOME_URL="https://www.centos.org/"
[2026-04-13 23:49:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 23:49:41] 
[2026-04-13 23:49:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 23:49:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 23:49:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 23:49:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 23:49:41] 
[2026-04-13 23:49:41] 2026-04-13 21:49:08,548 | INFO     | **************************************
[2026-04-13 23:49:41] 2026-04-13 21:49:09,053 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-04-13 23:49:41] 2026-04-13 21:49:09,107 | INFO     | sufficient remaining disk space (496362323968 B)
[2026-04-13 23:49:41] 2026-04-13 21:49:09,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 23:49:41] 2026-04-13 21:49:09,108 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 23:49:41] 2026-04-13 21:49:09,108 | INFO     | update_server=False
[2026-04-13 23:49:41] 2026-04-13 21:49:09,108 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 23:49:41] 2026-04-13 21:49:09,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 23:49:41] 2026-04-13 21:49:09,256 | INFO     | all payload control threads have been joined
[2026-04-13 23:49:41] 2026-04-13 21:49:09,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 23:49:41] 2026-04-13 21:49:09,396 | INFO     | aborting loop
[2026-04-13 23:49:41] 2026-04-13 21:49:09,620 | INFO     | all job control threads have been joined
[2026-04-13 23:49:41] 2026-04-13 21:49:09,814 | INFO     | all data control threads have been joined
[2026-04-13 23:49:41] 2026-04-13 21:49:10,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 23:49:41] 2026-04-13 21:49:10,113 | INFO     | [job] retrieve thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,115 | INFO     | [job] queue monitor thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,132 | INFO     | [job] validate thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,238 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,262 | INFO     | [payload] control thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,402 | INFO     | [job] job monitor thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,557 | INFO     | [payload] validate_post thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,626 | INFO     | [job] control thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,820 | INFO     | [data] control thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:10,978 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:11,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:11,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 23:49:41] 2026-04-13 21:49:11,483 | INFO     | [payload] failed_post thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:11,547 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:11,582 | INFO     | [data] copytool_in thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:12,103 | INFO     | [data] copytool_out thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:15,384 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 23:49:41] 2026-04-13 21:49:34,542 | INFO     | [monitor] cgroup control has ended
[2026-04-13 23:49:41] 2026-04-13 21:49:36,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874010253120)>', '<ExcThread(monitor, started 139873587554048)>']
[2026-04-13 23:49:41] 2026-04-13 21:49:39,989 | INFO     | PID=30967 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-13 23:49:41] 2026-04-13 21:49:39,990 | INFO     | .. there are 8 such processes running
[2026-04-13 23:49:41] 2026-04-13 21:49:39,990 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 23:49:41] 2026-04-13 21:49:39,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 23:49:41] 2026-04-13 21:49:39,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 23:49:41] 2026-04-13 21:49:39,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 23:49:41] 2026-04-13 21:49:39,990 | INFO     | [monitor] control thread has ended
[2026-04-13 23:49:41] 2026-04-13 21:49:41,190 | INFO     | all workflow threads have been joined
[2026-04-13 23:49:41] 2026-04-13 21:49:41,190 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 23:49:41] 2026-04-13 21:49:41,191 | INFO     | traces error code: 0
[2026-04-13 23:49:41] 2026-04-13 21:49:41,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 23:49:41] 2026-04-13 21:49:41,326 [wrapper] ==== pilot stdout END ====
[2026-04-13 23:49:41] 2026-04-13 21:49:41,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 23:49:41] 2026-04-13 21:49:41,341 [wrapper] pilotpid: 30967
[2026-04-13 23:49:41] 2026-04-13 21:49:41,347 [wrapper] Pilot exit status: 0
[2026-04-13 23:49:41] 2026-04-13 21:49:41,370 [wrapper] pandaids: 7089085993
[2026-04-13 23:49:41] 2026-04-13 21:49:41,419 [wrapper] cleanup supervisor_pilot 25507 30968
[2026-04-13 23:49:41] 2026-04-13 21:49:41,426 [wrapper] Test setup, not cleaning
[2026-04-13 23:49:41] 2026-04-13 21:49:41,435 [wrapper] apfmon messages muted
[2026-04-13 23:49:41] 2026-04-13 21:49:41,445 [wrapper] ==== wrapper stdout END ====
[2026-04-13 23:49:41] 2026-04-13 21:49:41,456 [wrapper] ==== wrapper stderr END ====
[2026-04-13 23:49:41]  *** Error codes and diagnostics ***
[2026-04-13 23:49:41]     "exeErrorCode": 0,
[2026-04-13 23:49:41]     "pilotErrorCode": 0,
[2026-04-13 23:49:41]  *** Listing of results directory ***
[2026-04-13 23:49:41] total 409300
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc    644190 Apr 13 08:39 pilot3.tar.gz
[2026-04-13 23:49:41] -rwx------. 1 boinc boinc     36322 Apr 13 08:41 runpilot2-wrapper.sh
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc      5094 Apr 13 08:46 queuedata.json
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc       100 Apr 13 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 23:49:41] -rwxr-xr-x. 1 boinc boinc      7986 Apr 13 19:42 run_atlas
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc       105 Apr 13 19:42 job.xml
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc      6307 Apr 13 19:42 init_data.xml
[2026-04-13 23:49:41] -rw-r--r--. 2 boinc boinc 223184986 Apr 13 19:42 EVNT.49263198._001653.pool.root.1
[2026-04-13 23:49:41] -rw-r--r--. 2 boinc boinc     15665 Apr 13 19:42 start_atlas.sh
[2026-04-13 23:49:41] drwxrwx--x. 2 boinc boinc        68 Apr 13 19:42 shared
[2026-04-13 23:49:41] -rw-r--r--. 2 boinc boinc    656922 Apr 13 19:42 input.tar.gz
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc         0 Apr 13 19:42 boinc_lockfile
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc      2576 Apr 13 19:43 pandaJob.out
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc       413 Apr 13 19:48 workernode_map.json
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc    997526 Apr 13 19:48 agis_schedconf.cvmfs.json
[2026-04-13 23:49:41] drwx------. 5 boinc boinc      4096 Apr 13 19:48 pilot3
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc 188422694 Apr 13 23:48 HITS.49263200._059609.pool.root.1
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc       489 Apr 13 23:48 boinc_task_state.xml
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc        95 Apr 13 23:48 pilot_heartbeat.json
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc      1017 Apr 13 23:48 memory_monitor_summary.json
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc   1511579 Apr 13 23:49 agis_ddmendpoints.agis.ALL.json
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc    408092 Apr 13 23:49 log.49263200._059609.job.log.tgz.1
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc      6342 Apr 13 23:49 heartbeat_new.json
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc      6233 Apr 13 23:49 heartbeat.json
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc      8192 Apr 13 23:49 boinc_mmap_file
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc        28 Apr 13 23:49 wrapper_checkpoint.txt
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc      4880 Apr 13 23:49 pilotlog.txt
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc   1329810 Apr 13 23:49 log.49263200._059609.job.log.1
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc       357 Apr 13 23:49 output.list
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc       410 Apr 13 23:49 runtime_log
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc   1751040 Apr 13 23:49 result.tar.gz
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc      8454 Apr 13 23:49 runtime_log.err
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc       655 Apr 13 23:49 90016e714298.diag
[2026-04-13 23:49:41] -rw-r--r--. 1 boinc boinc     20879 Apr 13 23:49 stderr.txt
[2026-04-13 23:49:41] HITS file was successfully produced:
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc 188422694 Apr 13 23:48 shared/HITS.pool.root.1
[2026-04-13 23:49:41]  *** Contents of shared directory: ***
[2026-04-13 23:49:41] total 404336
[2026-04-13 23:49:41] -rw-r--r--. 2 boinc boinc 223184986 Apr 13 19:42 ATLAS.root_0
[2026-04-13 23:49:41] -rw-r--r--. 2 boinc boinc     15665 Apr 13 19:42 start_atlas.sh
[2026-04-13 23:49:41] -rw-r--r--. 2 boinc boinc    656922 Apr 13 19:42 input.tar.gz
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc 188422694 Apr 13 23:48 HITS.pool.root.1
[2026-04-13 23:49:41] -rw-------. 1 boinc boinc   1751040 Apr 13 23:49 result.tar.gz
23:49:43 (26888): run_atlas exited; CPU time 52842.658965
23:49:43 (26888): called boinc_finish(0)

</stderr_txt>
]]>

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