Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:19:56 (991744): wrapper (7.7.26015): starting
03:19:56 (991744): wrapper: running run_atlas (--nthreads 10)
[2026-04-13 03:19:56] Arguments: --nthreads 10
[2026-04-13 03:19:56] Threads: 10
[2026-04-13 03:19:56] Checking for CVMFS
[2026-04-13 03:19:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 03:19:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 03:19:56] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 03:19:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 03:19:57] 2.13.3.0 13031 228459 672644 158407 2 19 24865212 32935936 38604 16776704 0 874623485 99.594 1101755706 33877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-13 03:19:57] CVMFS is ok
[2026-04-13 03:19:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 03:19:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 03:19:57] Further information can be found at the LHC@home message board.
[2026-04-13 03:19:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 03:19:57] Checking for apptainer binary...
[2026-04-13 03:19:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 03:19:57] Running /usr/bin/apptainer --version
[2026-04-13 03:19:57] apptainer version 1.4.5-2.el9
[2026-04-13 03:19:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 03:19:58] c6-2-11-4.aglt2.org
[2026-04-13 03:19:58] apptainer works
[2026-04-13 03:19:58] Set ATHENA_PROC_NUMBER=10
[2026-04-13 03:19:58] Set ATHENA_CORE_NUMBER=10
[2026-04-13 03:19:58] Starting ATLAS job with PandaID=7088965619
[2026-04-13 03:19:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 06:40:34]  *** The last 200 lines of the pilot log: ***
[2026-04-13 06:40:34] 2026-04-13 10:39:52,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,576 | INFO     | log transfer has been attempted: DONE
[2026-04-13 06:40:34] 2026-04-13 10:39:52,590 | INFO     | job 7088965619 has finished - writing final server update
[2026-04-13 06:40:34] 2026-04-13 10:39:52,590 | INFO     | total number of processed events: 400 (read)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,652 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7088965619/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,653 | INFO     | extracted standard info from prmon json
[2026-04-13 06:40:34] 2026-04-13 10:39:52,653 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 06:40:34] 2026-04-13 10:39:52,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 06:40:34] 2026-04-13 10:39:52,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 06:40:34] 2026-04-13 10:39:52,677 | INFO     | fitting pss+swap vs Time
[2026-04-13 06:40:34] 2026-04-13 10:39:52,677 | INFO     | sum of square deviations: 2299078950.3384614
[2026-04-13 06:40:34] 2026-04-13 10:39:52,679 | INFO     | sum of deviations: 22108101237.24612
[2026-04-13 06:40:34] 2026-04-13 10:39:52,679 | INFO     | mean x (centered): 0.0
[2026-04-13 06:40:34] 2026-04-13 10:39:52,679 | INFO     | mean y: 2529111.6974358973
[2026-04-13 06:40:34] 2026-04-13 10:39:52,679 | INFO     | intersect: 2529111.6974358973
[2026-04-13 06:40:34] 2026-04-13 10:39:52,679 | INFO     | chi2: 3.3505967225511157
[2026-04-13 06:40:34] 2026-04-13 10:39:52,680 | INFO     | sum of square deviations: 2126730312.3999903
[2026-04-13 06:40:34] 2026-04-13 10:39:52,699 | INFO     | sum of deviations: 46387684534.79999
[2026-04-13 06:40:34] 2026-04-13 10:39:52,699 | INFO     | mean x (centered): 0.0
[2026-04-13 06:40:34] 2026-04-13 10:39:52,699 | INFO     | mean y: 2550246.915789474
[2026-04-13 06:40:34] 2026-04-13 10:39:52,700 | INFO     | intersect: 2550246.915789474
[2026-04-13 06:40:34] 2026-04-13 10:39:52,700 | INFO     | chi2: 1.9512396912081338
[2026-04-13 06:40:34] 2026-04-13 10:39:52,700 | INFO     | current chi2=1.9512396912081338 (change=41.76441234854201 %)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,700 | INFO     | sum of square deviations: 1963207459.0486436
[2026-04-13 06:40:34] 2026-04-13 10:39:52,702 | INFO     | sum of deviations: 45095830334.05402
[2026-04-13 06:40:34] 2026-04-13 10:39:52,702 | INFO     | mean x (centered): 0.0
[2026-04-13 06:40:34] 2026-04-13 10:39:52,702 | INFO     | mean y: 2549041.891891892
[2026-04-13 06:40:34] 2026-04-13 10:39:52,702 | INFO     | intersect: 2549041.891891892
[2026-04-13 06:40:34] 2026-04-13 10:39:52,702 | INFO     | chi2: 1.9519005934626978
[2026-04-13 06:40:34] 2026-04-13 10:39:52,711 | INFO     | current chi2=1.9519005934626978 (change=-0.03387089026232598 %)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,711 | INFO     | right removable region: 184
[2026-04-13 06:40:34] 2026-04-13 10:39:52,711 | INFO     | sum of square deviations: 2126695542.3999903
[2026-04-13 06:40:34] 2026-04-13 10:39:52,712 | INFO     | sum of deviations: -16946887990.600002
[2026-04-13 06:40:34] 2026-04-13 10:39:52,713 | INFO     | mean x (centered): 0.0
[2026-04-13 06:40:34] 2026-04-13 10:39:52,713 | INFO     | mean y: 2563377.694736842
[2026-04-13 06:40:34] 2026-04-13 10:39:52,713 | INFO     | intersect: 2563377.694736842
[2026-04-13 06:40:34] 2026-04-13 10:39:52,713 | INFO     | chi2: 1.5142108208414826
[2026-04-13 06:40:34] 2026-04-13 10:39:52,713 | INFO     | current chi2=1.5142108208414826 (change=54.80772691472773 %)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,714 | INFO     | sum of square deviations: 1963160977.0486436
[2026-04-13 06:40:34] 2026-04-13 10:39:52,728 | INFO     | sum of deviations: -23641380873.886486
[2026-04-13 06:40:34] 2026-04-13 10:39:52,728 | INFO     | mean x (centered): 0.0
[2026-04-13 06:40:34] 2026-04-13 10:39:52,728 | INFO     | mean y: 2569550.372972973
[2026-04-13 06:40:34] 2026-04-13 10:39:52,728 | INFO     | intersect: 2569550.372972973
[2026-04-13 06:40:34] 2026-04-13 10:39:52,729 | INFO     | chi2: 1.4432884940230206
[2026-04-13 06:40:34] 2026-04-13 10:39:52,729 | INFO     | current chi2=1.4432884940230206 (change=4.68378153440013 %)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,729 | INFO     | left removable region: 10
[2026-04-13 06:40:34] 2026-04-13 10:39:52,729 | INFO     | sum of square deviations: 1633385978.114944
[2026-04-13 06:40:34] 2026-04-13 10:39:52,730 | INFO     | sum of deviations: 493297101.4827584
[2026-04-13 06:40:34] 2026-04-13 10:39:52,730 | INFO     | mean x (centered): 0.0
[2026-04-13 06:40:34] 2026-04-13 10:39:52,730 | INFO     | mean y: 2592919.327586207
[2026-04-13 06:40:34] 2026-04-13 10:39:52,731 | INFO     | intersect: 2592919.327586207
[2026-04-13 06:40:34] 2026-04-13 10:39:52,731 | INFO     | chi2: 0.0020693431759718065
[2026-04-13 06:40:34] 2026-04-13 10:39:52,731 | INFO     | current memory leak: 0.30 B/s (using 174 data points, chi2=0.00)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | could have reported an average CPU frequency of 2670 MHz (10 samples)
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | ..............................
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | . Timing measurements:
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | . get job = 0 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | . initial setup = 21 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | . payload setup = 28 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,745 | INFO     | . stage-in = 0 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,746 | INFO     | . payload execution = 11868 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,746 | INFO     | . stage-out = 7 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,746 | INFO     | . log creation = 0 s
[2026-04-13 06:40:34] 2026-04-13 10:39:52,746 | INFO     | ..............................
[2026-04-13 06:40:34] 2026-04-13 10:39:53,624 | INFO     | 
[2026-04-13 06:40:34] 2026-04-13 10:39:53,627 | INFO     | job summary report
[2026-04-13 06:40:34] 2026-04-13 10:39:53,627 | INFO     | --------------------------------------------------
[2026-04-13 06:40:34] 2026-04-13 10:39:53,627 | INFO     | PanDA job id: 7088965619
[2026-04-13 06:40:34] 2026-04-13 10:39:53,627 | INFO     | task id: 49263191
[2026-04-13 06:40:34] 2026-04-13 10:39:53,632 | INFO     | errors: (none)
[2026-04-13 06:40:34] 2026-04-13 10:39:53,632 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 06:40:34] 2026-04-13 10:39:53,632 | INFO     | pilot state: finished 
[2026-04-13 06:40:34] 2026-04-13 10:39:53,632 | INFO     | transexitcode: 0
[2026-04-13 06:40:34] 2026-04-13 10:39:53,633 | INFO     | exeerrorcode: 0
[2026-04-13 06:40:34] 2026-04-13 10:39:53,633 | INFO     | exeerrordiag: 
[2026-04-13 06:40:34] 2026-04-13 10:39:53,633 | INFO     | exitcode: 0
[2026-04-13 06:40:34] 2026-04-13 10:39:53,633 | INFO     | exitmsg: OK
[2026-04-13 06:40:34] 2026-04-13 10:39:53,633 | INFO     | cpuconsumptiontime: 44657 s
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | nevents: 400
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | neventsw: 0
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | pid: 1003327
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | pgrp: 1003327
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | corecount: 10
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | event service: False
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | sizes: {0: 2279721, 1: 2279976, 2: 2281578, 12: 2281578, 11901: 2310975, 11902: 2310974, 11909: 2320156, 11911: 2320212, 11915: 2320406}
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | --------------------------------------------------
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | 
[2026-04-13 06:40:34] 2026-04-13 10:39:53,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-13 06:40:34] 2026-04-13 10:39:53,764 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,764 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,764 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,764 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,765 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 06:40:34] 2026-04-13 10:39:53,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,766 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 06:40:34] 2026-04-13 10:39:53,766 | INFO     | job 7088965619 has completed (purged errors)
[2026-04-13 06:40:34] 2026-04-13 10:39:53,766 | INFO     | overall cleanup function is called
[2026-04-13 06:40:34] 2026-04-13 10:39:54,821 | INFO     | --- collectZombieJob: --- 10, [1003327]
[2026-04-13 06:40:34] 2026-04-13 10:39:54,822 | INFO     | zombie collector waiting for pid 1003327
[2026-04-13 06:40:34] 2026-04-13 10:39:54,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 06:40:34] 2026-04-13 10:39:54,822 | INFO     | collected zombie processes
[2026-04-13 06:40:34] 2026-04-13 10:39:54,822 | INFO     | will attempt to kill all subprocesses of pid=1003327
[2026-04-13 06:40:34] 2026-04-13 10:39:57,771 | INFO     | PID=997698 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 06:40:34] 2026-04-13 10:39:57,772 | INFO     | .. there are 38 such processes running
[2026-04-13 06:40:34] 2026-04-13 10:39:58,487 | INFO     | process IDs to be killed: [1003327] (in reverse order)
[2026-04-13 06:40:34] 2026-04-13 10:39:58,728 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 06:40:34] 2026-04-13 10:39:58,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 06:40:34] 2026-04-13 10:39:58,801 | INFO     | did not find any defunct processes belonging to 1003327
[2026-04-13 06:40:34] 2026-04-13 10:39:58,973 | INFO     | did not find any defunct processes belonging to 1003327
[2026-04-13 06:40:34] 2026-04-13 10:39:58,974 | INFO     | Ready for new job
[2026-04-13 06:40:34] 2026-04-13 10:39:58,979 | INFO     | **************************************
[2026-04-13 06:40:34] 2026-04-13 10:39:58,979 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 06:40:34] 2026-04-13 10:39:58,979 | INFO     | **************************************
[2026-04-13 06:40:34] 2026-04-13 10:39:58,979 | INFO     | 
[2026-04-13 06:40:34] 2026-04-13 10:39:58,989 | INFO     | architecture information:
[2026-04-13 06:40:34] 2026-04-13 10:39:58,992 | INFO     | executing command: cat /etc/os-release
[2026-04-13 06:40:34] 2026-04-13 10:39:59,119 | INFO     | cat /etc/os-release:
[2026-04-13 06:40:34] NAME="CentOS Linux"
[2026-04-13 06:40:34] VERSION="7 (Core)"
[2026-04-13 06:40:34] ID="centos"
[2026-04-13 06:40:34] ID_LIKE="rhel fedora"
[2026-04-13 06:40:34] VERSION_ID="7"
[2026-04-13 06:40:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 06:40:34] ANSI_COLOR="0;31"
[2026-04-13 06:40:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 06:40:34] HOME_URL="https://www.centos.org/"
[2026-04-13 06:40:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 06:40:34] 
[2026-04-13 06:40:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 06:40:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 06:40:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 06:40:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 06:40:34] 
[2026-04-13 06:40:34] 2026-04-13 10:39:59,119 | INFO     | **************************************
[2026-04-13 06:40:34] 2026-04-13 10:39:59,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-13 06:40:34] 2026-04-13 10:39:59,675 | INFO     | sufficient remaining disk space (93863280640 B)
[2026-04-13 06:40:34] 2026-04-13 10:39:59,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 06:40:34] 2026-04-13 10:39:59,676 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 06:40:34] 2026-04-13 10:39:59,676 | INFO     | update_server=False
[2026-04-13 06:40:34] 2026-04-13 10:39:59,676 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 06:40:34] 2026-04-13 10:39:59,878 | INFO     | all data control threads have been joined
[2026-04-13 06:40:34] 2026-04-13 10:40:00,142 | INFO     | all job control threads have been joined
[2026-04-13 06:40:34] 2026-04-13 10:40:00,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 06:40:34] 2026-04-13 10:40:00,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 06:40:34] 2026-04-13 10:40:00,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 06:40:34] 2026-04-13 10:40:00,376 | INFO     | aborting loop
[2026-04-13 06:40:34] 2026-04-13 10:40:00,682 | INFO     | [job] retrieve thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:00,741 | INFO     | [data] copytool_in thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:00,774 | INFO     | all payload control threads have been joined
[2026-04-13 06:40:34] 2026-04-13 10:40:00,818 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:00,886 | INFO     | [data] control thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:00,966 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:00,988 | INFO     | [job] validate thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:01,149 | INFO     | [job] control thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:01,256 | INFO     | [payload] failed_post thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:01,305 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:01,382 | INFO     | [job] job monitor thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:01,519 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:01,781 | INFO     | [payload] control thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:02,101 | INFO     | [payload] validate_post thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:02,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 06:40:34] 2026-04-13 10:40:02,378 | INFO     | [data] copytool_out thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:03,314 | INFO     | [job] queue monitor thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:04,271 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 06:40:34] 2026-04-13 10:40:27,349 | INFO     | [monitor] cgroup control has ended
[2026-04-13 06:40:34] 2026-04-13 10:40:28,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160178173760)>', '<ExcThread(monitor, started 140159904663296)>']
[2026-04-13 06:40:34] 2026-04-13 10:40:33,279 | INFO     | PID=997698 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-13 06:40:34] 2026-04-13 10:40:33,279 | INFO     | .. there are 38 such processes running
[2026-04-13 06:40:34] 2026-04-13 10:40:33,280 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 06:40:34] 2026-04-13 10:40:33,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 06:40:34] 2026-04-13 10:40:33,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 06:40:34] 2026-04-13 10:40:33,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 06:40:34] 2026-04-13 10:40:33,280 | INFO     | [monitor] control thread has ended
[2026-04-13 06:40:34] 2026-04-13 10:40:33,715 | INFO     | all workflow threads have been joined
[2026-04-13 06:40:34] 2026-04-13 10:40:33,728 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 06:40:34] 2026-04-13 10:40:33,728 | INFO     | traces error code: 0
[2026-04-13 06:40:34] 2026-04-13 10:40:33,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 06:40:34] 2026-04-13 10:40:34,113 [wrapper] ==== pilot stdout END ====
[2026-04-13 06:40:34] 2026-04-13 10:40:34,135 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 06:40:34] 2026-04-13 10:40:34,144 [wrapper] pilotpid: 997698
[2026-04-13 06:40:34] 2026-04-13 10:40:34,164 [wrapper] Pilot exit status: 0
[2026-04-13 06:40:34] 2026-04-13 10:40:34,260 [wrapper] pandaids: 7088965619
[2026-04-13 06:40:34] 2026-04-13 10:40:34,483 [wrapper] cleanup supervisor_pilot 1519653 997699
[2026-04-13 06:40:34] 2026-04-13 10:40:34,489 [wrapper] Test setup, not cleaning
[2026-04-13 06:40:34] 2026-04-13 10:40:34,493 [wrapper] apfmon messages muted
[2026-04-13 06:40:34] 2026-04-13 10:40:34,496 [wrapper] ==== wrapper stdout END ====
[2026-04-13 06:40:34] 2026-04-13 10:40:34,500 [wrapper] ==== wrapper stderr END ====
[2026-04-13 06:40:34]  *** Error codes and diagnostics ***
[2026-04-13 06:40:34]     "exeErrorCode": 0,
[2026-04-13 06:40:34]     "pilotErrorCode": 0,
[2026-04-13 06:40:34]  *** Listing of results directory ***
[2026-04-13 06:40:34] total 420796
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 01:03 pilot3.tar.gz
[2026-04-13 06:40:34] -rwx------. 1 boincer umatlas     36322 Apr 13 01:06 runpilot2-wrapper.sh
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 01:12 queuedata.json
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas       100 Apr 13 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 06:40:34] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 03:19 run_atlas
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas       105 Apr 13 03:19 job.xml
[2026-04-13 06:40:34] -rw-r--r--. 2 boincer umatlas 225332547 Apr 13 03:19 EVNT.49263189._001774.pool.root.1
[2026-04-13 06:40:34] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 03:19 start_atlas.sh
[2026-04-13 06:40:34] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 03:19 shared
[2026-04-13 06:40:34] -rw-r--r--. 2 boincer umatlas    656931 Apr 13 03:19 input.tar.gz
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas         0 Apr 13 03:19 boinc_lockfile
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 03:19 pandaJob.out
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas        57 Apr 13 03:19 setup.sh.local
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas    997783 Apr 13 03:20 agis_schedconf.cvmfs.json
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas       442 Apr 13 03:21 workernode_map.json
[2026-04-13 06:40:34] drwx------. 5 boincer umatlas      4096 Apr 13 03:21 pilot3
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas 198774139 Apr 13 06:37 HITS.49263191._065537.pool.root.1
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas       488 Apr 13 06:37 boinc_task_state.xml
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas      6793 Apr 13 06:38 init_data.xml
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas      1056 Apr 13 06:39 memory_monitor_summary.json
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas   1511579 Apr 13 06:39 agis_ddmendpoints.agis.ALL.json
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas    404168 Apr 13 06:39 log.49263191._065537.job.log.tgz.1
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas      6443 Apr 13 06:39 heartbeat_new.json
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas      6334 Apr 13 06:39 heartbeat.json
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas        95 Apr 13 06:40 pilot_heartbeat.json
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 06:40 boinc_mmap_file
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas      4818 Apr 13 06:40 pilotlog.txt
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas        28 Apr 13 06:40 wrapper_checkpoint.txt
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas    962933 Apr 13 06:40 log.49263191._065537.job.log.1
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas       357 Apr 13 06:40 output.list
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas       410 Apr 13 06:40 runtime_log
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas   1382400 Apr 13 06:40 result.tar.gz
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas      8971 Apr 13 06:40 runtime_log.err
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas       662 Apr 13 06:40 79d2d02ab7b0.diag
[2026-04-13 06:40:34] -rw-r--r--. 1 boincer umatlas     14770 Apr 13 06:40 stderr.txt
[2026-04-13 06:40:34] HITS file was successfully produced:
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas 198774139 Apr 13 06:37 shared/HITS.pool.root.1
[2026-04-13 06:40:34]  *** Contents of shared directory: ***
[2026-04-13 06:40:34] total 416188
[2026-04-13 06:40:34] -rw-r--r--. 2 boincer umatlas 225332547 Apr 13 03:19 ATLAS.root_0
[2026-04-13 06:40:34] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 03:19 start_atlas.sh
[2026-04-13 06:40:34] -rw-r--r--. 2 boincer umatlas    656931 Apr 13 03:19 input.tar.gz
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas 198774139 Apr 13 06:37 HITS.pool.root.1
[2026-04-13 06:40:34] -rw-------. 1 boincer umatlas   1382400 Apr 13 06:40 result.tar.gz
06:40:36 (991744): run_atlas exited; CPU time 45242.959269
06:40:36 (991744): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN