Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:07 (6975): wrapper (7.7.26015): starting
20:15:07 (6975): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 20:15:07] Arguments: --nthreads 8
[2026-04-13 20:15:07] Threads: 8
[2026-04-13 20:15:07] Checking for CVMFS
[2026-04-13 20:15:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 20:15:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 20:15:51] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 20:15:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 20:15:53] 2.11.2.0 24624 17557 97492 158426 3 13 19344194 25165824 96 130560 0 6039054 99.805 3646832 7650 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-13 20:15:53] CVMFS is ok
[2026-04-13 20:15:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 20:15:53] Checking for apptainer binary...
[2026-04-13 20:15:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 20:15:53] Running /usr/bin/apptainer --version
[2026-04-13 20:15:53] apptainer version 1.3.2-1.el7
[2026-04-13 20:15:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 20:16:11] cg-vwn383.simple-grid.lan
[2026-04-13 20:16:11] apptainer works
[2026-04-13 20:16:11] Set ATHENA_PROC_NUMBER=8
[2026-04-13 20:16:11] Set ATHENA_CORE_NUMBER=8
[2026-04-13 20:16:11] Starting ATLAS job with PandaID=7089085951
[2026-04-13 20:16:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 23:49:44]  *** The last 200 lines of the pilot log: ***
[2026-04-13 23:49:44] 2026-04-13 21:48:38,999 | INFO     | this job has now completed (state=finished)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,000 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,000 | INFO     | log transfer has been attempted: DONE
[2026-04-13 23:49:44] 2026-04-13 21:48:39,000 | INFO     | job 7089085951 has finished - writing final server update
[2026-04-13 23:49:44] 2026-04-13 21:48:39,000 | INFO     | total number of processed events: 400 (read)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,002 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-7089085951/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,003 | INFO     | extracted standard info from prmon json
[2026-04-13 23:49:44] 2026-04-13 21:48:39,003 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 23:49:44] 2026-04-13 21:48:39,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 23:49:44] 2026-04-13 21:48:39,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 23:49:44] 2026-04-13 21:48:39,008 | INFO     | fitting pss+swap vs Time
[2026-04-13 23:49:44] 2026-04-13 21:48:39,008 | INFO     | sum of square deviations: 2518000700.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,010 | INFO     | sum of deviations: -34830110863.999985
[2026-04-13 23:49:44] 2026-04-13 21:48:39,010 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,010 | INFO     | mean y: 2532376.8756218906
[2026-04-13 23:49:44] 2026-04-13 21:48:39,010 | INFO     | intersect: 2532376.8756218906
[2026-04-13 23:49:44] 2026-04-13 21:48:39,011 | INFO     | chi2: 2.5623867258238064
[2026-04-13 23:49:44] 2026-04-13 21:48:39,011 | INFO     | sum of square deviations: 2334722845.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,012 | INFO     | sum of deviations: -20255126036.5
[2026-04-13 23:49:44] 2026-04-13 21:48:39,013 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,013 | INFO     | mean y: 2544281.3214285714
[2026-04-13 23:49:44] 2026-04-13 21:48:39,013 | INFO     | intersect: 2544281.3214285714
[2026-04-13 23:49:44] 2026-04-13 21:48:39,013 | INFO     | chi2: 1.7962206283992428
[2026-04-13 23:49:44] 2026-04-13 21:48:39,013 | INFO     | current chi2=1.7962206283992428 (change=29.900486515291387 %)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,014 | INFO     | sum of square deviations: 2160561440.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,019 | INFO     | sum of deviations: -19224419924.999992
[2026-04-13 23:49:44] 2026-04-13 21:48:39,019 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,019 | INFO     | mean y: 2545184.0209424086
[2026-04-13 23:49:44] 2026-04-13 21:48:39,020 | INFO     | intersect: 2545184.0209424086
[2026-04-13 23:49:44] 2026-04-13 21:48:39,020 | INFO     | chi2: 1.7948838289462534
[2026-04-13 23:49:44] 2026-04-13 21:48:39,020 | INFO     | current chi2=1.7948838289462534 (change=0.07442289838195978 %)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,020 | INFO     | right removable region: 190
[2026-04-13 23:49:44] 2026-04-13 21:48:39,021 | INFO     | sum of square deviations: 2334722845.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,022 | INFO     | sum of deviations: -67444359335.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,022 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,022 | INFO     | mean y: 2559220.8673469387
[2026-04-13 23:49:44] 2026-04-13 21:48:39,022 | INFO     | intersect: 2559220.8673469387
[2026-04-13 23:49:44] 2026-04-13 21:48:39,023 | INFO     | chi2: 0.9783680806097321
[2026-04-13 23:49:44] 2026-04-13 21:48:39,023 | INFO     | current chi2=0.9783680806097321 (change=61.81809440590248 %)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,023 | INFO     | sum of square deviations: 2160561440.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,025 | INFO     | sum of deviations: -63210958054.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,025 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,025 | INFO     | mean y: 2555497.523560209
[2026-04-13 23:49:44] 2026-04-13 21:48:39,025 | INFO     | intersect: 2555497.523560209
[2026-04-13 23:49:44] 2026-04-13 21:48:39,026 | INFO     | chi2: 0.9771632285487255
[2026-04-13 23:49:44] 2026-04-13 21:48:39,026 | INFO     | current chi2=0.9771632285487255 (change=0.12314915877629028 %)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,026 | INFO     | left removable region: 10
[2026-04-13 23:49:44] 2026-04-13 21:48:39,026 | INFO     | sum of square deviations: 1808350185.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,028 | INFO     | sum of deviations: -46670449252.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,028 | INFO     | mean x (centered): 0.0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,028 | INFO     | mean y: 2570625.7555555557
[2026-04-13 23:49:44] 2026-04-13 21:48:39,028 | INFO     | intersect: 2570625.7555555557
[2026-04-13 23:49:44] 2026-04-13 21:48:39,028 | INFO     | chi2: 0.17603179453125195
[2026-04-13 23:49:44] 2026-04-13 21:48:39,029 | INFO     | current memory leak: -25.81 B/s (using 180 data points, chi2=0.18)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,029 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,029 | INFO     | ..............................
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . Timing measurements:
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . get job = 0 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . initial setup = 110 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . payload setup = 108 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . stage-in = 0 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . payload execution = 12254 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . stage-out = 3 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | . log creation = 1 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,030 | INFO     | ..............................
[2026-04-13 23:49:44] 2026-04-13 21:48:39,449 | INFO     | 
[2026-04-13 23:49:44] 2026-04-13 21:48:39,450 | INFO     | job summary report
[2026-04-13 23:49:44] 2026-04-13 21:48:39,450 | INFO     | --------------------------------------------------
[2026-04-13 23:49:44] 2026-04-13 21:48:39,450 | INFO     | PanDA job id: 7089085951
[2026-04-13 23:49:44] 2026-04-13 21:48:39,450 | INFO     | task id: 49263200
[2026-04-13 23:49:44] 2026-04-13 21:48:39,450 | INFO     | errors: (none)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | pilot state: finished 
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | transexitcode: 0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | exeerrorcode: 0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | exeerrordiag: 
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | exitcode: 0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | exitmsg: OK
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | cpuconsumptiontime: 57693 s
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | nevents: 400
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | neventsw: 0
[2026-04-13 23:49:44] 2026-04-13 21:48:39,451 | INFO     | pid: 15381
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | pgrp: 15381
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | corecount: 8
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | event service: False
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | sizes: {0: 2279664, 1: 2249829, 2: 2281549, 12: 2281577, 12366: 2311360, 12367: 2311359, 12370: 2320543, 12371: 2320599, 12373: 2320793}
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | --------------------------------------------------
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | 
[2026-04-13 23:49:44] 2026-04-13 21:48:39,452 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2026-04-13 23:49:44] 2026-04-13 21:48:39,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | job 7089085951 has completed (purged errors)
[2026-04-13 23:49:44] 2026-04-13 21:48:39,992 | INFO     | overall cleanup function is called
[2026-04-13 23:49:44] 2026-04-13 21:48:41,000 | INFO     | --- collectZombieJob: --- 10, [15381]
[2026-04-13 23:49:44] 2026-04-13 21:48:41,001 | INFO     | zombie collector waiting for pid 15381
[2026-04-13 23:49:44] 2026-04-13 21:48:41,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 23:49:44] 2026-04-13 21:48:41,001 | INFO     | collected zombie processes
[2026-04-13 23:49:44] 2026-04-13 21:48:41,001 | INFO     | will attempt to kill all subprocesses of pid=15381
[2026-04-13 23:49:44] 2026-04-13 21:48:41,071 | INFO     | process IDs to be killed: [15381] (in reverse order)
[2026-04-13 23:49:44] 2026-04-13 21:48:41,793 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 23:49:44] 2026-04-13 21:48:41,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 23:49:44] 2026-04-13 21:48:41,795 | INFO     | did not find any defunct processes belonging to 15381
[2026-04-13 23:49:44] 2026-04-13 21:48:41,797 | INFO     | did not find any defunct processes belonging to 15381
[2026-04-13 23:49:44] 2026-04-13 21:48:41,797 | INFO     | Ready for new job
[2026-04-13 23:49:44] 2026-04-13 21:48:41,799 | INFO     | **************************************
[2026-04-13 23:49:44] 2026-04-13 21:48:41,799 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 23:49:44] 2026-04-13 21:48:41,799 | INFO     | **************************************
[2026-04-13 23:49:44] 2026-04-13 21:48:41,799 | INFO     | 
[2026-04-13 23:49:44] 2026-04-13 21:48:41,800 | INFO     | pilot is running in a VM
[2026-04-13 23:49:44] 2026-04-13 21:48:41,800 | INFO     | architecture information:
[2026-04-13 23:49:44] 2026-04-13 21:48:41,809 | INFO     | executing command: cat /etc/os-release
[2026-04-13 23:49:44] 2026-04-13 21:48:42,046 | INFO     | cat /etc/os-release:
[2026-04-13 23:49:44] NAME="CentOS Linux"
[2026-04-13 23:49:44] VERSION="7 (Core)"
[2026-04-13 23:49:44] ID="centos"
[2026-04-13 23:49:44] ID_LIKE="rhel fedora"
[2026-04-13 23:49:44] VERSION_ID="7"
[2026-04-13 23:49:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 23:49:44] ANSI_COLOR="0;31"
[2026-04-13 23:49:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 23:49:44] HOME_URL="https://www.centos.org/"
[2026-04-13 23:49:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 23:49:44] 
[2026-04-13 23:49:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 23:49:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 23:49:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 23:49:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 23:49:44] 
[2026-04-13 23:49:44] 2026-04-13 21:48:42,046 | INFO     | **************************************
[2026-04-13 23:49:44] 2026-04-13 21:48:42,550 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2026-04-13 23:49:44] 2026-04-13 21:48:42,746 | INFO     | sufficient remaining disk space (496654876672 B)
[2026-04-13 23:49:44] 2026-04-13 21:48:42,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 23:49:44] 2026-04-13 21:48:42,747 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 23:49:44] 2026-04-13 21:48:42,747 | INFO     | update_server=False
[2026-04-13 23:49:44] 2026-04-13 21:48:42,747 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 23:49:44] 2026-04-13 21:48:42,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 23:49:44] 2026-04-13 21:48:43,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 23:49:44] 2026-04-13 21:48:43,615 | INFO     | all data control threads have been joined
[2026-04-13 23:49:44] 2026-04-13 21:48:43,627 | INFO     | all payload control threads have been joined
[2026-04-13 23:49:44] 2026-04-13 21:48:43,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 23:49:44] 2026-04-13 21:48:43,730 | INFO     | aborting loop
[2026-04-13 23:49:44] 2026-04-13 21:48:43,753 | INFO     | [job] retrieve thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:43,766 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:43,972 | INFO     | [data] copytool_in thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,101 | INFO     | all job control threads have been joined
[2026-04-13 23:49:44] 2026-04-13 21:48:44,121 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 23:49:44] 2026-04-13 21:48:44,358 | INFO     | [payload] failed_post thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,616 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,622 | INFO     | [data] control thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,634 | INFO     | [payload] control thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,736 | INFO     | [job] job monitor thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,758 | INFO     | [data] copytool_out thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,774 | INFO     | [job] validate thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:44,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:45,052 | INFO     | [payload] validate_post thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:45,108 | INFO     | [job] control thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:45,187 | INFO     | [job] queue monitor thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:48:47,060 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 23:49:44] 2026-04-13 21:49:12,297 | INFO     | PID=10954 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-13 23:49:44] 2026-04-13 21:49:12,298 | INFO     | .. there are 2 such processes running
[2026-04-13 23:49:44] 2026-04-13 21:49:12,298 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 23:49:44] 2026-04-13 21:49:12,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 23:49:44] 2026-04-13 21:49:12,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 23:49:44] 2026-04-13 21:49:34,110 | INFO     | [monitor] cgroup control has ended
[2026-04-13 23:49:44] 2026-04-13 21:49:34,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177977415488)>', '<ExcThread(monitor, started 140177305487104)>']
[2026-04-13 23:49:44] 2026-04-13 21:49:35,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 23:49:44] 2026-04-13 21:49:35,437 | INFO     | [monitor] control thread has ended
[2026-04-13 23:49:44] 2026-04-13 21:49:39,565 | INFO     | all workflow threads have been joined
[2026-04-13 23:49:44] 2026-04-13 21:49:39,565 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 23:49:44] 2026-04-13 21:49:39,565 | INFO     | traces error code: 0
[2026-04-13 23:49:44] 2026-04-13 21:49:39,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 23:49:44] 2026-04-13 21:49:40,067 [wrapper] ==== pilot stdout END ====
[2026-04-13 23:49:44] 2026-04-13 21:49:40,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 23:49:44] 2026-04-13 21:49:40,230 [wrapper] pilotpid: 10954
[2026-04-13 23:49:44] 2026-04-13 21:49:40,334 [wrapper] Pilot exit status: 0
[2026-04-13 23:49:44] 2026-04-13 21:49:40,837 [wrapper] pandaids: 7089085951
[2026-04-13 23:49:44] 2026-04-13 21:49:41,722 [wrapper] cleanup supervisor_pilot  3475 10955
[2026-04-13 23:49:44] 2026-04-13 21:49:41,834 [wrapper] Test setup, not cleaning
[2026-04-13 23:49:44] 2026-04-13 21:49:41,937 [wrapper] apfmon messages muted
[2026-04-13 23:49:44] 2026-04-13 21:49:42,037 [wrapper] ==== wrapper stdout END ====
[2026-04-13 23:49:44] 2026-04-13 21:49:42,133 [wrapper] ==== wrapper stderr END ====
[2026-04-13 23:49:44]  *** Error codes and diagnostics ***
[2026-04-13 23:49:44]     "exeErrorCode": 0,
[2026-04-13 23:49:44]     "pilotErrorCode": 0,
[2026-04-13 23:49:45]  *** Listing of results directory ***
[2026-04-13 23:49:45] total 423608
[2026-04-13 23:49:45] -rwx------. 1 boinc boinc     36322 Apr 13 08:38 runpilot2-wrapper.sh
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc    644190 Apr 13 08:39 pilot3.tar.gz
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc      5094 Apr 13 08:39 queuedata.json
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc       100 Apr 13 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 23:49:45] -rwxr-xr-x. 1 boinc boinc      7986 Apr 13 20:15 run_atlas
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc       105 Apr 13 20:15 job.xml
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc      6308 Apr 13 20:15 init_data.xml
[2026-04-13 23:49:45] -rw-r--r--. 2 boinc boinc 223514714 Apr 13 20:15 EVNT.49263198._001652.pool.root.1
[2026-04-13 23:49:45] -rw-r--r--. 2 boinc boinc     15665 Apr 13 20:15 start_atlas.sh
[2026-04-13 23:49:45] drwxrwx--x. 2 boinc boinc        68 Apr 13 20:15 shared
[2026-04-13 23:49:45] -rw-r--r--. 2 boinc boinc    656921 Apr 13 20:15 input.tar.gz
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc         0 Apr 13 20:15 boinc_lockfile
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc      2576 Apr 13 20:16 pandaJob.out
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc       415 Apr 13 20:22 workernode_map.json
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc    997534 Apr 13 20:22 agis_schedconf.cvmfs.json
[2026-04-13 23:49:45] drwx------. 5 boinc boinc      4096 Apr 13 20:22 pilot3
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc 203180865 Apr 13 23:47 HITS.49263200._059567.pool.root.1
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc       488 Apr 13 23:47 boinc_task_state.xml
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc      1021 Apr 13 23:48 memory_monitor_summary.json
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc   1511579 Apr 13 23:48 agis_ddmendpoints.agis.ALL.json
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc    367388 Apr 13 23:48 log.49263200._059567.job.log.tgz.1
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc      6352 Apr 13 23:48 heartbeat_new.json
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc      6243 Apr 13 23:48 heartbeat.json
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc        95 Apr 13 23:49 pilot_heartbeat.json
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc      8192 Apr 13 23:49 boinc_mmap_file
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc        28 Apr 13 23:49 wrapper_checkpoint.txt
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc      4880 Apr 13 23:49 pilotlog.txt
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc   1148946 Apr 13 23:49 log.49263200._059567.job.log.1
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc       357 Apr 13 23:49 output.list
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc       410 Apr 13 23:49 runtime_log
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc   1536000 Apr 13 23:49 result.tar.gz
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc      8454 Apr 13 23:49 runtime_log.err
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc       656 Apr 13 23:49 8f4745f9b1cd.diag
[2026-04-13 23:49:45] -rw-r--r--. 1 boinc boinc     20661 Apr 13 23:49 stderr.txt
[2026-04-13 23:49:45] HITS file was successfully produced:
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc 203180865 Apr 13 23:47 shared/HITS.pool.root.1
[2026-04-13 23:49:45]  *** Contents of shared directory: ***
[2026-04-13 23:49:45] total 418860
[2026-04-13 23:49:45] -rw-r--r--. 2 boinc boinc 223514714 Apr 13 20:15 ATLAS.root_0
[2026-04-13 23:49:45] -rw-r--r--. 2 boinc boinc     15665 Apr 13 20:15 start_atlas.sh
[2026-04-13 23:49:45] -rw-r--r--. 2 boinc boinc    656921 Apr 13 20:15 input.tar.gz
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc 203180865 Apr 13 23:47 HITS.pool.root.1
[2026-04-13 23:49:45] -rw-------. 1 boinc boinc   1536000 Apr 13 23:49 result.tar.gz
23:49:47 (6975): run_atlas exited; CPU time 57807.769471
23:49:47 (6975): called boinc_finish(0)

</stderr_txt>
]]>

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