Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:46:29 (1502993): wrapper (7.7.26015): starting
17:46:29 (1502993): wrapper: running run_atlas (--nthreads 4)
[2026-04-15 17:46:29] Arguments: --nthreads 4
[2026-04-15 17:46:29] Threads: 4
[2026-04-15 17:46:29] Checking for CVMFS
[2026-04-15 17:46:29] No cvmfs_config command found, will try listing directly
[2026-04-15 17:46:29] CVMFS is ok
[2026-04-15 17:46:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-15 17:46:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-15 17:46:29] Further information can be found at the LHC@home message board.
[2026-04-15 17:46:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-15 17:46:29] Checking for apptainer binary...
[2026-04-15 17:46:29] which: no apptainer in ((null))
[2026-04-15 17:46:29] apptainer is not installed, using version from CVMFS
[2026-04-15 17:46:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-15 17:46:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-15 17:46:30] apptainer works
[2026-04-15 17:46:30] Set ATHENA_PROC_NUMBER=4
[2026-04-15 17:46:30] Set ATHENA_CORE_NUMBER=4
[2026-04-15 17:46:30] Starting ATLAS job with PandaID=7088964138
[2026-04-15 17:46:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:36:29 (1829284): wrapper (7.7.26015): starting
19:36:29 (1829284): wrapper: running run_atlas (--nthreads 4)
[2026-04-15 19:36:29] Arguments: --nthreads 4
[2026-04-15 19:36:29] Threads: 4
[2026-04-15 19:36:29] This job has been restarted, cleaning up previous attempt
[2026-04-15 19:36:29] Checking for CVMFS
[2026-04-15 19:36:29] No cvmfs_config command found, will try listing directly
[2026-04-15 19:36:29] CVMFS is ok
[2026-04-15 19:36:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-15 19:36:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-15 19:36:29] Further information can be found at the LHC@home message board.
[2026-04-15 19:36:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-15 19:36:29] Checking for apptainer binary...
[2026-04-15 19:36:29] which: no apptainer in ((null))
[2026-04-15 19:36:29] apptainer is not installed, using version from CVMFS
[2026-04-15 19:36:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-15 19:36:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-15 19:36:30] apptainer works
[2026-04-15 19:36:30] Set ATHENA_PROC_NUMBER=4
[2026-04-15 19:36:30] Set ATHENA_CORE_NUMBER=4
[2026-04-15 19:36:30] Starting ATLAS job with PandaID=7088964138
[2026-04-15 19:36:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-15 23:13:12]  *** The last 200 lines of the pilot log: ***
[2026-04-15 23:13:12] 2026-04-15 21:12:22,850 | INFO     | job 7088964138 has finished - writing final server update
[2026-04-15 23:13:12] 2026-04-15 21:12:22,851 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1790164/.job.ad'
[2026-04-15 23:13:12] 2026-04-15 21:12:22,851 | INFO     | total number of processed events: 400 (read)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,876 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7088964138/memory_monitor_summary.json (trf name=prmon)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,876 | INFO     | extracted standard info from prmon json
[2026-04-15 23:13:12] 2026-04-15 21:12:22,877 | INFO     | extracted standard memory fields from prmon json
[2026-04-15 23:13:12] 2026-04-15 21:12:22,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-15 23:13:12] 2026-04-15 21:12:22,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-15 23:13:12] 2026-04-15 21:12:22,881 | INFO     | fitting pss+swap vs Time
[2026-04-15 23:13:12] 2026-04-15 21:12:22,881 | INFO     | sum of square deviations: 2954447953.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,882 | INFO     | sum of deviations: 14413311129.00001
[2026-04-15 23:13:12] 2026-04-15 21:12:22,883 | INFO     | mean x (centered): 0.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,883 | INFO     | mean y: 2300076.537735849
[2026-04-15 23:13:12] 2026-04-15 21:12:22,883 | INFO     | intersect: 2300076.537735849
[2026-04-15 23:13:12] 2026-04-15 21:12:22,883 | INFO     | chi2: 2.1611325183535453
[2026-04-15 23:13:12] 2026-04-15 21:12:22,883 | INFO     | sum of square deviations: 2750295288.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,885 | INFO     | sum of deviations: 27593269784.999996
[2026-04-15 23:13:12] 2026-04-15 21:12:22,885 | INFO     | mean x (centered): 0.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,885 | INFO     | mean y: 2309725.0434782607
[2026-04-15 23:13:12] 2026-04-15 21:12:22,885 | INFO     | intersect: 2309725.0434782607
[2026-04-15 23:13:12] 2026-04-15 21:12:22,885 | INFO     | chi2: 1.297311174354732
[2026-04-15 23:13:12] 2026-04-15 21:12:22,886 | INFO     | current chi2=1.297311174354732 (change=39.970771651565066 %)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,886 | INFO     | sum of square deviations: 2555770710.5
[2026-04-15 23:13:12] 2026-04-15 21:12:22,887 | INFO     | sum of deviations: 26749971380.999992
[2026-04-15 23:13:12] 2026-04-15 21:12:22,887 | INFO     | mean x (centered): 0.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,887 | INFO     | mean y: 2309063.801980198
[2026-04-15 23:13:12] 2026-04-15 21:12:22,888 | INFO     | intersect: 2309063.801980198
[2026-04-15 23:13:12] 2026-04-15 21:12:22,888 | INFO     | chi2: 1.2979548967648025
[2026-04-15 23:13:12] 2026-04-15 21:12:22,888 | INFO     | current chi2=1.2979548967648025 (change=-0.04961973833229025 %)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,888 | INFO     | right removable region: 201
[2026-04-15 23:13:12] 2026-04-15 21:12:22,888 | INFO     | sum of square deviations: 2750295288.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,890 | INFO     | sum of deviations: -11546902462.999998
[2026-04-15 23:13:12] 2026-04-15 21:12:22,890 | INFO     | mean x (centered): 0.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,890 | INFO     | mean y: 2319221.811594203
[2026-04-15 23:13:12] 2026-04-15 21:12:22,890 | INFO     | intersect: 2319221.811594203
[2026-04-15 23:13:12] 2026-04-15 21:12:22,890 | INFO     | chi2: 0.8851042775941671
[2026-04-15 23:13:12] 2026-04-15 21:12:22,890 | INFO     | current chi2=0.8851042775941671 (change=59.04442369556856 %)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,891 | INFO     | sum of square deviations: 2555770710.5
[2026-04-15 23:13:12] 2026-04-15 21:12:22,892 | INFO     | sum of deviations: -11736808303.5
[2026-04-15 23:13:12] 2026-04-15 21:12:22,892 | INFO     | mean x (centered): 0.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,892 | INFO     | mean y: 2319368.9455445544
[2026-04-15 23:13:12] 2026-04-15 21:12:22,892 | INFO     | intersect: 2319368.9455445544
[2026-04-15 23:13:12] 2026-04-15 21:12:22,893 | INFO     | chi2: 0.885252842908977
[2026-04-15 23:13:12] 2026-04-15 21:12:22,893 | INFO     | current chi2=0.885252842908977 (change=-0.016785063474521935 %)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,893 | INFO     | left removable region: 10
[2026-04-15 23:13:12] 2026-04-15 21:12:22,893 | INFO     | sum of square deviations: 2160561440.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,894 | INFO     | sum of deviations: 1195979908.0000002
[2026-04-15 23:13:12] 2026-04-15 21:12:22,894 | INFO     | mean x (centered): 0.0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,895 | INFO     | mean y: 2329794.445026178
[2026-04-15 23:13:12] 2026-04-15 21:12:22,895 | INFO     | intersect: 2329794.445026178
[2026-04-15 23:13:12] 2026-04-15 21:12:22,895 | INFO     | chi2: 0.0009353812536355432
[2026-04-15 23:13:12] 2026-04-15 21:12:22,895 | INFO     | current memory leak: 0.55 B/s (using 191 data points, chi2=0.00)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,895 | INFO     | could have reported an average CPU frequency of 2701 MHz (11 samples)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | ..............................
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . Timing measurements:
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . get job = 0 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . initial setup = 1 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . payload setup = 13 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . stage-in = 0 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . payload execution = 12905 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . stage-out = 1 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | . log creation = 0 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,896 | INFO     | ..............................
[2026-04-15 23:13:12] 2026-04-15 21:12:22,990 | INFO     | 
[2026-04-15 23:13:12] 2026-04-15 21:12:22,990 | INFO     | job summary report
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | --------------------------------------------------
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | PanDA job id: 7088964138
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | task id: 49645815
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | errors: (none)
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | pilot state: finished 
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | transexitcode: 0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | exeerrorcode: 0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | exeerrordiag: 
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | exitcode: 0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,991 | INFO     | exitmsg: OK
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | cpuconsumptiontime: 50157 s
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | nevents: 400
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | neventsw: 0
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | pid: 1836482
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | pgrp: 1836482
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | corecount: 4
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | event service: False
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | sizes: {0: 2279971, 1: 2281629, 11: 2281629, 12923: 2312123, 12925: 2321201, 12927: 2321339}
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | --------------------------------------------------
[2026-04-15 23:13:12] 2026-04-15 21:12:22,992 | INFO     | 
[2026-04-15 23:13:12] 2026-04-15 21:12:22,993 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-04-15 23:13:12] 2026-04-15 21:12:23,023 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-15 23:13:12] 2026-04-15 21:12:23,025 | INFO     | job 7088964138 has completed (purged errors)
[2026-04-15 23:13:12] 2026-04-15 21:12:23,026 | INFO     | overall cleanup function is called
[2026-04-15 23:13:12] 2026-04-15 21:12:24,034 | INFO     | --- collectZombieJob: --- 10, [1836482]
[2026-04-15 23:13:12] 2026-04-15 21:12:24,035 | INFO     | zombie collector waiting for pid 1836482
[2026-04-15 23:13:12] 2026-04-15 21:12:24,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-15 23:13:12] 2026-04-15 21:12:24,035 | INFO     | collected zombie processes
[2026-04-15 23:13:12] 2026-04-15 21:12:24,035 | INFO     | will attempt to kill all subprocesses of pid=1836482
[2026-04-15 23:13:12] 2026-04-15 21:12:24,857 | INFO     | process IDs to be killed: [1836482] (in reverse order)
[2026-04-15 23:13:12] 2026-04-15 21:12:25,194 | WARNING  | found no corresponding commands to process id(s)
[2026-04-15 23:13:12] 2026-04-15 21:12:25,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-15 23:13:12] 2026-04-15 21:12:25,224 | INFO     | did not find any defunct processes belonging to 1836482
[2026-04-15 23:13:12] 2026-04-15 21:12:25,250 | INFO     | did not find any defunct processes belonging to 1836482
[2026-04-15 23:13:12] 2026-04-15 21:12:25,251 | INFO     | Ready for new job
[2026-04-15 23:13:12] 2026-04-15 21:12:25,253 | INFO     | **************************************
[2026-04-15 23:13:12] 2026-04-15 21:12:25,253 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-15 23:13:12] 2026-04-15 21:12:25,253 | INFO     | **************************************
[2026-04-15 23:13:12] 2026-04-15 21:12:25,253 | INFO     | 
[2026-04-15 23:13:12] 2026-04-15 21:12:25,262 | INFO     | architecture information:
[2026-04-15 23:13:12] 2026-04-15 21:12:25,263 | INFO     | executing command: cat /etc/os-release
[2026-04-15 23:13:12] 2026-04-15 21:12:25,286 | INFO     | cat /etc/os-release:
[2026-04-15 23:13:12] NAME="CentOS Linux"
[2026-04-15 23:13:12] VERSION="7 (Core)"
[2026-04-15 23:13:12] ID="centos"
[2026-04-15 23:13:12] ID_LIKE="rhel fedora"
[2026-04-15 23:13:12] VERSION_ID="7"
[2026-04-15 23:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-15 23:13:12] ANSI_COLOR="0;31"
[2026-04-15 23:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-15 23:13:12] HOME_URL="https://www.centos.org/"
[2026-04-15 23:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-15 23:13:12] 
[2026-04-15 23:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-15 23:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-15 23:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-15 23:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-15 23:13:12] 
[2026-04-15 23:13:12] 2026-04-15 21:12:25,286 | INFO     | **************************************
[2026-04-15 23:13:12] 2026-04-15 21:12:25,789 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-04-15 23:13:12] 2026-04-15 21:12:25,812 | INFO     | sufficient remaining disk space (287269978112 B)
[2026-04-15 23:13:12] 2026-04-15 21:12:25,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-15 23:13:12] 2026-04-15 21:12:25,813 | INFO     | current server update state: UPDATING_FINAL
[2026-04-15 23:13:12] 2026-04-15 21:12:25,813 | INFO     | update_server=False
[2026-04-15 23:13:12] 2026-04-15 21:12:25,813 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-15 23:13:12] 2026-04-15 21:12:25,959 | INFO     | all payload control threads have been joined
[2026-04-15 23:13:12] 2026-04-15 21:12:26,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-15 23:13:12] 2026-04-15 21:12:26,110 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-15 23:13:12] 2026-04-15 21:12:26,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-15 23:13:12] 2026-04-15 21:12:26,110 | INFO     | will abort loop
[2026-04-15 23:13:12] 2026-04-15 21:12:26,135 | INFO     | all job control threads have been joined
[2026-04-15 23:13:12] 2026-04-15 21:12:26,504 | INFO     | all data control threads have been joined
[2026-04-15 23:13:12] 2026-04-15 21:12:26,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-15 23:13:12] 2026-04-15 21:12:26,818 | INFO     | [job] retrieve thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:26,965 | INFO     | [payload] control thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,116 | INFO     | [job] job monitor thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,141 | INFO     | [job] control thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-15 23:13:12] 2026-04-15 21:12:27,211 | INFO     | [payload] execute_payloads thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,480 | INFO     | [data] copytool_in thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,510 | INFO     | [data] control thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,545 | INFO     | [job] create_data_payload thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,605 | INFO     | [payload] failed_post thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,717 | INFO     | [payload] validate_pre thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,832 | INFO     | [payload] validate_post thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:27,931 | INFO     | [job] validate thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:28,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-15 23:13:12] 2026-04-15 21:12:28,595 | INFO     | [data] copytool_out thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:29,006 | INFO     | [job] queue monitor thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:31,205 | INFO     | [data] queue_monitor thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:36,419 | INFO     | job.realtimelogging is not enabled
[2026-04-15 23:13:12] 2026-04-15 21:12:37,428 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-15 23:13:12] 2026-04-15 21:12:55,149 | INFO     | PID=1833448 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-15 23:13:12] 2026-04-15 21:12:55,149 | INFO     | .. there are 22 such processes running
[2026-04-15 23:13:12] 2026-04-15 21:12:55,150 | INFO     | found 0 job(s) in 20 queues
[2026-04-15 23:13:12] 2026-04-15 21:12:55,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-15 23:13:12] 2026-04-15 21:12:55,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-15 23:13:12] 2026-04-15 21:13:05,939 | INFO     | [monitor] cgroup control has ended
[2026-04-15 23:13:12] 2026-04-15 21:13:06,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22851730659136)>', '<ExcThread(monitor, started 22851496457984)>']
[2026-04-15 23:13:12] 2026-04-15 21:13:07,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-15 23:13:12] 2026-04-15 21:13:07,212 | INFO     | [monitor] control thread has ended
[2026-04-15 23:13:12] 2026-04-15 21:13:11,576 | INFO     | all workflow threads have been joined
[2026-04-15 23:13:12] 2026-04-15 21:13:11,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-15 23:13:12] 2026-04-15 21:13:11,577 | INFO     | traces error code: 0
[2026-04-15 23:13:12] 2026-04-15 21:13:11,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-15 23:13:12] 2026-04-15 21:13:11,727 [wrapper] ==== pilot stdout END ====
[2026-04-15 23:13:12] 2026-04-15 21:13:11,731 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-15 23:13:12] 2026-04-15 21:13:11,734 [wrapper] pilotpid: 1833448
[2026-04-15 23:13:12] 2026-04-15 21:13:11,738 [wrapper] Pilot exit status: 0
[2026-04-15 23:13:12] 2026-04-15 21:13:11,752 [wrapper] pandaids: 7088964138 7088964138
[2026-04-15 23:13:12] 2026-04-15 21:13:11,950 [wrapper] cleanup supervisor_pilot 2406673 1833449
[2026-04-15 23:13:12] 2026-04-15 21:13:11,956 [wrapper] Test setup, not cleaning
[2026-04-15 23:13:12] 2026-04-15 21:13:11,960 [wrapper] apfmon messages muted
[2026-04-15 23:13:12] 2026-04-15 21:13:11,965 [wrapper] ==== wrapper stdout END ====
[2026-04-15 23:13:12] 2026-04-15 21:13:11,969 [wrapper] ==== wrapper stderr END ====
[2026-04-15 23:13:12]  *** Error codes and diagnostics ***
[2026-04-15 23:13:12]     "exeErrorCode": 0,
[2026-04-15 23:13:12]     "pilotErrorCode": 0,
[2026-04-15 23:13:12]  *** Listing of results directory ***
[2026-04-15 23:13:12] total 636964
[2026-04-15 23:13:12] drwx------. 5 boinc boinc      4096 Apr  1 14:07 pilot3
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc    644190 Apr 13 07:03 pilot3.tar.gz
[2026-04-15 23:13:12] -rwx------. 1 boinc boinc     36322 Apr 13 07:05 runpilot2-wrapper.sh
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc      5094 Apr 13 07:09 queuedata.json
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc       100 Apr 15 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-15 23:13:12] -rwxr-xr-x. 1 boinc boinc      7986 Apr 15 17:46 run_atlas
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc       105 Apr 15 17:46 job.xml
[2026-04-15 23:13:12] -rw-r--r--. 3 boinc boinc 225435168 Apr 15 17:46 EVNT.48629115._000479.pool.root.1
[2026-04-15 23:13:12] -rw-r--r--. 3 boinc boinc 225435168 Apr 15 17:46 ATLAS.root_0
[2026-04-15 23:13:12] -rw-r--r--. 2 boinc boinc     15665 Apr 15 17:46 start_atlas.sh
[2026-04-15 23:13:12] drwxrwx--x. 2 boinc boinc      4096 Apr 15 17:46 shared
[2026-04-15 23:13:12] -rw-r--r--. 2 boinc boinc    656950 Apr 15 17:46 input.tar.gz
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc         0 Apr 15 17:46 boinc_lockfile
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc      2629 Apr 15 19:36 pandaJob.out
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc    997164 Apr 15 19:36 agis_schedconf.cvmfs.json
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc       444 Apr 15 19:36 workernode_map.json
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc      6549 Apr 15 19:37 init_data.xml
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc       488 Apr 15 23:11 boinc_task_state.xml
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc 194297136 Apr 15 23:11 HITS.49645815._011986.pool.root.1
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc      1028 Apr 15 23:12 memory_monitor_summary.json
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc   1511633 Apr 15 23:12 agis_ddmendpoints.agis.ALL.json
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc    329846 Apr 15 23:12 log.49645815._011986.job.log.tgz.1
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc      6376 Apr 15 23:12 heartbeat_new.json
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc      6267 Apr 15 23:12 heartbeat.json
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc        96 Apr 15 23:12 pilot_heartbeat.json
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc      8192 Apr 15 23:13 boinc_mmap_file
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc        28 Apr 15 23:13 wrapper_checkpoint.txt
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc      5088 Apr 15 23:13 pilotlog.txt
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc   1182068 Apr 15 23:13 log.49645815._011986.job.log.1
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc       357 Apr 15 23:13 output.list
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc       410 Apr 15 23:13 runtime_log
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc   1525760 Apr 15 23:13 result.tar.gz
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc      8921 Apr 15 23:13 runtime_log.err
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc       791 Apr 15 23:13 79985e170c5e.diag
[2026-04-15 23:13:12] -rw-r--r--. 1 boinc boinc     22735 Apr 15 23:13 stderr.txt
[2026-04-15 23:13:12] HITS file was successfully produced:
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc 194297136 Apr 15 23:11 shared/HITS.pool.root.1
[2026-04-15 23:13:12]  *** Contents of shared directory: ***
[2026-04-15 23:13:12] total 412056
[2026-04-15 23:13:12] -rw-r--r--. 3 boinc boinc 225435168 Apr 15 17:46 ATLAS.root_0
[2026-04-15 23:13:12] -rw-r--r--. 2 boinc boinc     15665 Apr 15 17:46 start_atlas.sh
[2026-04-15 23:13:12] -rw-r--r--. 2 boinc boinc    656950 Apr 15 17:46 input.tar.gz
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc 194297136 Apr 15 23:11 HITS.pool.root.1
[2026-04-15 23:13:12] -rw-------. 1 boinc boinc   1525760 Apr 15 23:13 result.tar.gz
23:13:13 (1829284): run_atlas exited; CPU time 51051.254715
23:13:13 (1829284): called boinc_finish(0)

</stderr_txt>
]]>

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