Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:18:20 (1859559): wrapper (7.7.26015): starting
05:18:20 (1859559): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 05:18:21] Arguments: --nthreads 8
[2026-04-13 05:18:21] Threads: 8
[2026-04-13 05:18:21] Checking for CVMFS
[2026-04-13 05:18:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 05:18:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 05:18:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 05:18:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 05:18:21] 2.13.3.0 10021 156683 199936 158410 2 26 23687932 39288832 5852 16776704 0 102557352 99.586 108834880 36067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-13 05:18:21] CVMFS is ok
[2026-04-13 05:18:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 05:18:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 05:18:21] Further information can be found at the LHC@home message board.
[2026-04-13 05:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 05:18:21] Checking for apptainer binary...
[2026-04-13 05:18:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 05:18:21] Running /usr/bin/apptainer --version
[2026-04-13 05:18:22] apptainer version 1.4.5-2.el9
[2026-04-13 05:18:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 05:18:22] c-211-4.aglt2.org
[2026-04-13 05:18:22] apptainer works
[2026-04-13 05:18:22] Set ATHENA_PROC_NUMBER=8
[2026-04-13 05:18:22] Set ATHENA_CORE_NUMBER=8
[2026-04-13 05:18:22] Starting ATLAS job with PandaID=7089056801
[2026-04-13 05:18:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 10:49:54]  *** The last 200 lines of the pilot log: ***
[2026-04-13 10:49:54] 2026-04-13 14:49:33,455 | INFO     | job 7089056801 has state=finished
[2026-04-13 10:49:54] 2026-04-13 14:49:33,455 | INFO     | preparing for final server update for job 7089056801 in state='finished'
[2026-04-13 10:49:54] 2026-04-13 14:49:33,455 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7089056801/jobReport.json
[2026-04-13 10:49:54] 2026-04-13 14:49:33,458 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-13 10:49:54] 2026-04-13 14:49:33,477 | INFO     | this job has now completed (state=finished)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,477 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,477 | INFO     | log transfer has been attempted: DONE
[2026-04-13 10:49:54] 2026-04-13 14:49:33,478 | INFO     | job 7089056801 has finished - writing final server update
[2026-04-13 10:49:54] 2026-04-13 14:49:33,482 | INFO     | total number of processed events: 400 (read)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,494 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7089056801/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,495 | INFO     | extracted standard info from prmon json
[2026-04-13 10:49:54] 2026-04-13 14:49:33,495 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 10:49:54] 2026-04-13 14:49:33,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 10:49:54] 2026-04-13 14:49:33,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 10:49:54] 2026-04-13 14:49:33,505 | INFO     | fitting pss+swap vs Time
[2026-04-13 10:49:54] 2026-04-13 14:49:33,505 | INFO     | sum of square deviations: 10545467735.555532
[2026-04-13 10:49:54] 2026-04-13 14:49:33,508 | INFO     | sum of deviations: -15975479322.925919
[2026-04-13 10:49:54] 2026-04-13 14:49:33,511 | INFO     | mean x (centered): 0.0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,511 | INFO     | mean y: 2553872.339506173
[2026-04-13 10:49:54] 2026-04-13 14:49:33,514 | INFO     | intersect: 2553872.339506173
[2026-04-13 10:49:54] 2026-04-13 14:49:33,515 | INFO     | chi2: 3.019110919309542
[2026-04-13 10:49:54] 2026-04-13 14:49:33,515 | INFO     | sum of square deviations: 10064721915.404388
[2026-04-13 10:49:54] 2026-04-13 14:49:33,520 | INFO     | sum of deviations: -15862208230.7743
[2026-04-13 10:49:54] 2026-04-13 14:49:33,521 | INFO     | mean x (centered): 0.0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,521 | INFO     | mean y: 2553908.3072100314
[2026-04-13 10:49:54] 2026-04-13 14:49:33,521 | INFO     | intersect: 2553908.3072100314
[2026-04-13 10:49:54] 2026-04-13 14:49:33,524 | INFO     | chi2: 3.018116992476195
[2026-04-13 10:49:54] 2026-04-13 14:49:33,524 | INFO     | current chi2=3.018116992476195 (change=0.03292117646257481 %)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,524 | INFO     | right removable region: 318
[2026-04-13 10:49:54] 2026-04-13 14:49:33,525 | INFO     | sum of square deviations: 10064689341.335367
[2026-04-13 10:49:54] 2026-04-13 14:49:33,530 | INFO     | sum of deviations: -90714425331.79317
[2026-04-13 10:49:54] 2026-04-13 14:49:33,530 | INFO     | mean x (centered): 0.0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,530 | INFO     | mean y: 2577465.9310344825
[2026-04-13 10:49:54] 2026-04-13 14:49:33,530 | INFO     | intersect: 2577465.9310344825
[2026-04-13 10:49:54] 2026-04-13 14:49:33,531 | INFO     | chi2: 0.5638094006877471
[2026-04-13 10:49:54] 2026-04-13 14:49:33,531 | INFO     | current chi2=0.5638094006877471 (change=81.32531676521882 %)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,532 | INFO     | sum of square deviations: 9598748800.614687
[2026-04-13 10:49:54] 2026-04-13 14:49:33,534 | INFO     | sum of deviations: -101610856313.17516
[2026-04-13 10:49:54] 2026-04-13 14:49:33,535 | INFO     | mean x (centered): 0.0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,535 | INFO     | mean y: 2581010.9840764333
[2026-04-13 10:49:54] 2026-04-13 14:49:33,535 | INFO     | intersect: 2581010.9840764333
[2026-04-13 10:49:54] 2026-04-13 14:49:33,535 | INFO     | chi2: 0.47179295393892506
[2026-04-13 10:49:54] 2026-04-13 14:49:33,538 | INFO     | current chi2=0.47179295393892506 (change=16.320488206932758 %)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,538 | INFO     | left removable region: 10
[2026-04-13 10:49:54] 2026-04-13 14:49:33,539 | INFO     | sum of square deviations: 9058919874.737005
[2026-04-13 10:49:54] 2026-04-13 14:49:33,544 | INFO     | sum of deviations: -99915037853.23378
[2026-04-13 10:49:54] 2026-04-13 14:49:33,544 | INFO     | mean x (centered): 0.0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,544 | INFO     | mean y: 2581585.974025974
[2026-04-13 10:49:54] 2026-04-13 14:49:33,545 | INFO     | intersect: 2581585.974025974
[2026-04-13 10:49:54] 2026-04-13 14:49:33,545 | INFO     | chi2: 0.4667572139851069
[2026-04-13 10:49:54] 2026-04-13 14:49:33,545 | INFO     | current memory leak: -11.03 B/s (using 308 data points, chi2=0.47)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,546 | INFO     | could have reported an average CPU frequency of 2599 MHz (14 samples)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,546 | INFO     | ..............................
[2026-04-13 10:49:54] 2026-04-13 14:49:33,546 | INFO     | . Timing measurements:
[2026-04-13 10:49:54] 2026-04-13 14:49:33,546 | INFO     | . get job = 0 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,546 | INFO     | . initial setup = 18 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,547 | INFO     | . payload setup = 40 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,547 | INFO     | . stage-in = 0 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,547 | INFO     | . payload execution = 19771 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,547 | INFO     | . stage-out = 3 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,547 | INFO     | . log creation = 0 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,547 | INFO     | ..............................
[2026-04-13 10:49:54] 2026-04-13 14:49:33,666 | INFO     | 
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | job summary report
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | --------------------------------------------------
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | PanDA job id: 7089056801
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | task id: 49263191
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | errors: (none)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | pilot state: finished 
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | transexitcode: 0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,667 | INFO     | exeerrorcode: 0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | exeerrordiag: 
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | exitcode: 0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | exitmsg: OK
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | cpuconsumptiontime: 52568 s
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | nevents: 400
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | neventsw: 0
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | pid: 1869756
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | pgrp: 1869756
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | corecount: 8
[2026-04-13 10:49:54] 2026-04-13 14:49:33,668 | INFO     | event service: False
[2026-04-13 10:49:54] 2026-04-13 14:49:33,669 | INFO     | sizes: {0: 2279721, 1: 2281550, 19816: 2314670, 19820: 2323724, 19822: 2323862}
[2026-04-13 10:49:54] 2026-04-13 14:49:33,669 | INFO     | --------------------------------------------------
[2026-04-13 10:49:54] 2026-04-13 14:49:33,669 | INFO     | 
[2026-04-13 10:49:54] 2026-04-13 14:49:33,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-13 10:49:54] 2026-04-13 14:49:33,705 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,706 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,706 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,706 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,708 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,708 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 10:49:54] 2026-04-13 14:49:33,708 | INFO     | job 7089056801 has completed (purged errors)
[2026-04-13 10:49:54] 2026-04-13 14:49:33,708 | INFO     | overall cleanup function is called
[2026-04-13 10:49:54] 2026-04-13 14:49:34,740 | INFO     | --- collectZombieJob: --- 10, [1869756]
[2026-04-13 10:49:54] 2026-04-13 14:49:34,740 | INFO     | zombie collector waiting for pid 1869756
[2026-04-13 10:49:54] 2026-04-13 14:49:34,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 10:49:54] 2026-04-13 14:49:34,740 | INFO     | collected zombie processes
[2026-04-13 10:49:54] 2026-04-13 14:49:34,740 | INFO     | will attempt to kill all subprocesses of pid=1869756
[2026-04-13 10:49:54] 2026-04-13 14:49:35,753 | INFO     | PID=1864807 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-13 10:49:54] 2026-04-13 14:49:35,753 | INFO     | .. there are 7 such processes running
[2026-04-13 10:49:54] 2026-04-13 14:49:35,807 | INFO     | process IDs to be killed: [1869756] (in reverse order)
[2026-04-13 10:49:54] 2026-04-13 14:49:35,916 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 10:49:54] 2026-04-13 14:49:35,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 10:49:54] 2026-04-13 14:49:35,951 | INFO     | did not find any defunct processes belonging to 1869756
[2026-04-13 10:49:54] 2026-04-13 14:49:36,013 | INFO     | did not find any defunct processes belonging to 1869756
[2026-04-13 10:49:54] 2026-04-13 14:49:36,014 | INFO     | Ready for new job
[2026-04-13 10:49:54] 2026-04-13 14:49:36,050 | INFO     | **************************************
[2026-04-13 10:49:54] 2026-04-13 14:49:36,050 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 10:49:54] 2026-04-13 14:49:36,051 | INFO     | **************************************
[2026-04-13 10:49:54] 2026-04-13 14:49:36,051 | INFO     | 
[2026-04-13 10:49:54] 2026-04-13 14:49:36,053 | INFO     | architecture information:
[2026-04-13 10:49:54] 2026-04-13 14:49:36,094 | INFO     | executing command: cat /etc/os-release
[2026-04-13 10:49:54] 2026-04-13 14:49:36,157 | INFO     | cat /etc/os-release:
[2026-04-13 10:49:54] NAME="CentOS Linux"
[2026-04-13 10:49:54] VERSION="7 (Core)"
[2026-04-13 10:49:54] ID="centos"
[2026-04-13 10:49:54] ID_LIKE="rhel fedora"
[2026-04-13 10:49:54] VERSION_ID="7"
[2026-04-13 10:49:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 10:49:54] ANSI_COLOR="0;31"
[2026-04-13 10:49:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 10:49:54] HOME_URL="https://www.centos.org/"
[2026-04-13 10:49:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 10:49:54] 
[2026-04-13 10:49:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 10:49:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 10:49:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 10:49:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 10:49:54] 
[2026-04-13 10:49:54] 2026-04-13 14:49:36,158 | INFO     | **************************************
[2026-04-13 10:49:54] 2026-04-13 14:49:36,661 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-13 10:49:54] 2026-04-13 14:49:36,698 | INFO     | sufficient remaining disk space (52997128192 B)
[2026-04-13 10:49:54] 2026-04-13 14:49:36,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 10:49:54] 2026-04-13 14:49:36,699 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 10:49:54] 2026-04-13 14:49:36,699 | INFO     | update_server=False
[2026-04-13 10:49:54] 2026-04-13 14:49:36,699 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 10:49:54] 2026-04-13 14:49:36,701 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-13 10:49:54] 2026-04-13 14:49:36,701 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 10:49:54] 2026-04-13 14:49:36,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 10:49:54] 2026-04-13 14:49:36,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 10:49:54] 2026-04-13 14:49:36,954 | INFO     | all data control threads have been joined
[2026-04-13 10:49:54] 2026-04-13 14:49:37,119 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 10:49:54] 2026-04-13 14:49:37,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 10:49:54] 2026-04-13 14:49:37,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 10:49:54] 2026-04-13 14:49:37,119 | INFO     | will abort loop
[2026-04-13 10:49:54] 2026-04-13 14:49:37,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 10:49:54] 2026-04-13 14:49:37,666 | INFO     | all job control threads have been joined
[2026-04-13 10:49:54] 2026-04-13 14:49:37,705 | INFO     | [job] retrieve thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:37,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 10:49:54] 2026-04-13 14:49:37,960 | INFO     | [data] control thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,070 | INFO     | all payload control threads have been joined
[2026-04-13 10:49:54] 2026-04-13 14:49:38,071 | INFO     | [payload] failed_post thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,132 | INFO     | [job] job monitor thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,284 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,672 | INFO     | [job] control thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 10:49:54] 2026-04-13 14:49:38,766 | INFO     | [payload] validate_post thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,790 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:38,867 | INFO     | [data] copytool_in thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:39,076 | INFO     | [payload] control thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:39,154 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:39,160 | INFO     | [job] validate thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:39,166 | INFO     | [data] copytool_out thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:39,712 | INFO     | [job] queue monitor thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:41,881 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:46,765 | INFO     | [monitor] cgroup control has ended
[2026-04-13 10:49:54] 2026-04-13 14:49:47,693 | INFO     | job.realtimelogging is not enabled
[2026-04-13 10:49:54] 2026-04-13 14:49:48,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 10:49:54] 2026-04-13 14:49:49,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340235474752)>', '<ExcThread(monitor, started 140339953547008)>']
[2026-04-13 10:49:54] 2026-04-13 14:49:49,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 10:49:54] 2026-04-13 14:49:49,778 | INFO     | [monitor] control thread has ended
[2026-04-13 10:49:54] 2026-04-13 14:49:54,160 | INFO     | all workflow threads have been joined
[2026-04-13 10:49:54] 2026-04-13 14:49:54,160 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 10:49:54] 2026-04-13 14:49:54,160 | INFO     | traces error code: 0
[2026-04-13 10:49:54] 2026-04-13 14:49:54,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 10:49:54] 2026-04-13 14:49:54,389 [wrapper] ==== pilot stdout END ====
[2026-04-13 10:49:54] 2026-04-13 14:49:54,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 10:49:54] 2026-04-13 14:49:54,412 [wrapper] pilotpid: 1864807
[2026-04-13 10:49:54] 2026-04-13 14:49:54,417 [wrapper] Pilot exit status: 0
[2026-04-13 10:49:54] 2026-04-13 14:49:54,460 [wrapper] pandaids: 7089056801
[2026-04-13 10:49:54] 2026-04-13 14:49:54,539 [wrapper] cleanup supervisor_pilot 2366022 1864808
[2026-04-13 10:49:54] 2026-04-13 14:49:54,553 [wrapper] Test setup, not cleaning
[2026-04-13 10:49:54] 2026-04-13 14:49:54,568 [wrapper] apfmon messages muted
[2026-04-13 10:49:54] 2026-04-13 14:49:54,595 [wrapper] ==== wrapper stdout END ====
[2026-04-13 10:49:54] 2026-04-13 14:49:54,617 [wrapper] ==== wrapper stderr END ====
[2026-04-13 10:49:54]  *** Error codes and diagnostics ***
[2026-04-13 10:49:54]     "exeErrorCode": 0,
[2026-04-13 10:49:54]     "pilotErrorCode": 0,
[2026-04-13 10:49:54]  *** Listing of results directory ***
[2026-04-13 10:49:54] total 418092
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 01:37 pilot3.tar.gz
[2026-04-13 10:49:54] -rwx------. 1 boincer umatlas     36322 Apr 13 02:01 runpilot2-wrapper.sh
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 02:02 queuedata.json
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas       100 Apr 13 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 10:49:54] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 13 05:18 run_atlas
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas       105 Apr 13 05:18 job.xml
[2026-04-13 10:49:54] -rw-r--r--. 2 boincer umatlas 224185109 Apr 13 05:18 EVNT.49263189._001798.pool.root.1
[2026-04-13 10:49:54] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 05:18 start_atlas.sh
[2026-04-13 10:49:54] drwxrwx--x. 2 boincer umatlas      4096 Apr 13 05:18 shared
[2026-04-13 10:49:54] -rw-r--r--. 2 boincer umatlas    656934 Apr 13 05:18 input.tar.gz
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas         0 Apr 13 05:18 boinc_lockfile
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas      2578 Apr 13 05:18 pandaJob.out
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas        57 Apr 13 05:18 setup.sh.local
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas    997783 Apr 13 05:18 agis_schedconf.cvmfs.json
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas       441 Apr 13 05:19 workernode_map.json
[2026-04-13 10:49:54] drwx------. 5 boincer umatlas      4096 Apr 13 05:19 pilot3
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas      6575 Apr 13 10:47 init_data.xml
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas 195779016 Apr 13 10:48 HITS.49263191._066145.pool.root.1
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas       488 Apr 13 10:48 boinc_task_state.xml
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas        95 Apr 13 10:49 pilot_heartbeat.json
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas      1044 Apr 13 10:49 memory_monitor_summary.json
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas   1511579 Apr 13 10:49 agis_ddmendpoints.agis.ALL.json
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas    426534 Apr 13 10:49 log.49263191._066145.job.log.tgz.1
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas      6415 Apr 13 10:49 heartbeat_new.json
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas      6306 Apr 13 10:49 heartbeat.json
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas        28 Apr 13 10:49 wrapper_checkpoint.txt
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 10:49 boinc_mmap_file
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas      4805 Apr 13 10:49 pilotlog.txt
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas   1625142 Apr 13 10:49 log.49263191._066145.job.log.1
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas       357 Apr 13 10:49 output.list
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas       410 Apr 13 10:49 runtime_log
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas   2068480 Apr 13 10:49 result.tar.gz
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas      8959 Apr 13 10:49 runtime_log.err
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas       656 Apr 13 10:49 86c8190d4852.diag
[2026-04-13 10:49:54] -rw-r--r--. 1 boincer umatlas     21201 Apr 13 10:49 stderr.txt
[2026-04-13 10:49:54] HITS file was successfully produced:
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas 195779016 Apr 13 10:48 shared/HITS.pool.root.1
[2026-04-13 10:49:54]  *** Contents of shared directory: ***
[2026-04-13 10:49:54] total 412808
[2026-04-13 10:49:54] -rw-r--r--. 2 boincer umatlas 224185109 Apr 13 05:18 ATLAS.root_0
[2026-04-13 10:49:54] -rw-r--r--. 2 boincer umatlas     15665 Apr 13 05:18 start_atlas.sh
[2026-04-13 10:49:54] -rw-r--r--. 2 boincer umatlas    656934 Apr 13 05:18 input.tar.gz
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas 195779016 Apr 13 10:48 HITS.pool.root.1
[2026-04-13 10:49:54] -rw-------. 1 boincer umatlas   2068480 Apr 13 10:49 result.tar.gz
10:49:56 (1859559): run_atlas exited; CPU time 52969.058837
10:49:56 (1859559): called boinc_finish(0)

</stderr_txt>
]]>

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