Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:27:48 (8793): wrapper (7.7.26015): starting
03:27:48 (8793): wrapper: running run_atlas (--nthreads 12)
[2026-04-13 03:27:48] Arguments: --nthreads 12
[2026-04-13 03:27:48] Threads: 12
[2026-04-13 03:27:48] Checking for CVMFS
[2026-04-13 03:27:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 03:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 03:27:48] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 03:27:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 03:27:49] 2.11.2.0 2945 486101 91404 158407 0 49 10409500 20275201 1 130560 2 206469788 99.949 27762117 18318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-13 03:27:49] CVMFS is ok
[2026-04-13 03:27:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 03:27:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 03:27:49] Further information can be found at the LHC@home message board.
[2026-04-13 03:27:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 03:27:49] Checking for apptainer binary...
[2026-04-13 03:27:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 03:27:49] Running /usr/bin/apptainer --version
[2026-04-13 03:27:49] apptainer version 1.3.2-1.el7
[2026-04-13 03:27:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 03:27:50] c-205-2.aglt2.org
[2026-04-13 03:27:50] apptainer works
[2026-04-13 03:27:50] Set ATHENA_PROC_NUMBER=12
[2026-04-13 03:27:50] Set ATHENA_CORE_NUMBER=12
[2026-04-13 03:27:50] Starting ATLAS job with PandaID=7089057599
[2026-04-13 03:27:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 04:42:32]  *** The last 200 lines of the pilot log: ***
[2026-04-13 04:42:32]  status_code=0
[2026-04-13 04:42:32]  storage_token=
[2026-04-13 04:42:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7089057599/log.49263191._066686.job.log.tgz.1
[2026-04-13 04:42:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/c9/log.49263191._066686.job.log.tgz.1
[2026-04-13 04:42:32]  workdir=None
[2026-04-13 04:42:32] ]
[2026-04-13 04:42:32] 2026-04-13 08:41:58,472 | INFO     | transferring file log.49263191._066686.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/log.49263191._066686.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-13 04:42:32] 2026-04-13 08:41:58,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/log.49263191._066686.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263191._066686.job
[2026-04-13 04:42:32] 2026-04-13 08:41:58,494 | INFO     | adding to output.list: log.49263191._066686.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/c9/log.49263191._066686.job.log.tg
[2026-04-13 04:42:32] 2026-04-13 08:41:58,495 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-13 04:42:32] 2026-04-13 08:41:58,495 | INFO     | summary of transferred files:
[2026-04-13 04:42:32] 2026-04-13 08:41:58,496 | INFO     |  -- lfn=log.49263191._066686.job.log.tgz.1, status_code=0, status=transferred
[2026-04-13 04:42:32] 2026-04-13 08:41:58,496 | INFO     | stage-out finished correctly
[2026-04-13 04:42:32] 2026-04-13 08:42:00,435 | WARNING  | process 17221 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 04:42:32] 2026-04-13 08:42:00,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,437 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-13 04:42:32] 2026-04-13 08:42:00,437 | WARNING  | maxPSS not found in memory monitor output
[2026-04-13 04:42:32] 2026-04-13 08:42:00,437 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4518723 B
[2026-04-13 04:42:32] 2026-04-13 08:42:00,437 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15604 B
[2026-04-13 04:42:32] 2026-04-13 08:42:00,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,457 | INFO     | sufficient remaining disk space (29373759488 B)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,457 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,458 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7089057599: 4816542 B (within 5033164800 B limit)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,459 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7089057599/HITS.49263191._066686.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,459 | INFO     | total size of present files: 0 B (workdir size: 4816542 B)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,459 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/HITS.49263191._066686.pool.root.1 since it does not exist
[2026-04-13 04:42:32] 2026-04-13 08:42:00,527 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-13 04:42:32] 2026-04-13 08:42:00,629 | INFO     | job 7089057599 has state=finished
[2026-04-13 04:42:32] 2026-04-13 08:42:00,629 | INFO     | preparing for final server update for job 7089057599 in state='finished'
[2026-04-13 04:42:32] 2026-04-13 08:42:00,649 | INFO     | number of running child processes to parent process 17221: 1
[2026-04-13 04:42:32] 2026-04-13 08:42:00,649 | INFO     | maximum number of monitored processes: 6
[2026-04-13 04:42:32] 2026-04-13 08:42:00,696 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,696 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/jobReport.json
[2026-04-13 04:42:32] 2026-04-13 08:42:00,698 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-13 04:42:32] 2026-04-13 08:42:00,699 | INFO     | this job has now completed (state=finished)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,699 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,699 | INFO     | log transfer has been attempted: DONE
[2026-04-13 04:42:32] 2026-04-13 08:42:00,699 | INFO     | job 7089057599 has finished - writing final server update
[2026-04-13 04:42:32] 2026-04-13 08:42:00,699 | INFO     | total number of processed events: 400 (read)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,701 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7089057599/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,701 | INFO     | extracted standard info from prmon json
[2026-04-13 04:42:32] 2026-04-13 08:42:00,701 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 04:42:32] 2026-04-13 08:42:00,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 04:42:32] 2026-04-13 08:42:00,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 04:42:32] 2026-04-13 08:42:00,703 | INFO     | fitting pss+swap vs Time
[2026-04-13 04:42:32] 2026-04-13 08:42:00,703 | INFO     | sum of square deviations: 85136480.0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,704 | INFO     | sum of deviations: -6118648431.999998
[2026-04-13 04:42:32] 2026-04-13 08:42:00,704 | INFO     | mean x (centered): 0.0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,704 | INFO     | mean y: 2852073.123076923
[2026-04-13 04:42:32] 2026-04-13 08:42:00,704 | INFO     | intersect: 2852073.123076923
[2026-04-13 04:42:32] 2026-04-13 08:42:00,704 | INFO     | chi2: 0.10307669040352625
[2026-04-13 04:42:32] 2026-04-13 08:42:00,704 | INFO     | current memory leak: -71.87 B/s (using 65 data points, chi2=0.10)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | ..............................
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . Timing measurements:
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . get job = 0 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . initial setup = 7 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . payload setup = 15 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . stage-in = 0 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . payload execution = 4393 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,705 | INFO     | . stage-out = 0 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,706 | INFO     | . log creation = 0 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,706 | INFO     | ..............................
[2026-04-13 04:42:32] 2026-04-13 08:42:00,920 | INFO     | 
[2026-04-13 04:42:32] 2026-04-13 08:42:00,920 | INFO     | job summary report
[2026-04-13 04:42:32] 2026-04-13 08:42:00,921 | INFO     | --------------------------------------------------
[2026-04-13 04:42:32] 2026-04-13 08:42:00,921 | INFO     | PanDA job id: 7089057599
[2026-04-13 04:42:32] 2026-04-13 08:42:00,921 | INFO     | task id: 49263191
[2026-04-13 04:42:32] 2026-04-13 08:42:00,921 | INFO     | errors: (none)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,921 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 04:42:32] 2026-04-13 08:42:00,921 | INFO     | pilot state: finished 
[2026-04-13 04:42:32] 2026-04-13 08:42:00,922 | INFO     | transexitcode: 0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,922 | INFO     | exeerrorcode: 0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,922 | INFO     | exeerrordiag: 
[2026-04-13 04:42:32] 2026-04-13 08:42:00,922 | INFO     | exitcode: 0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,922 | INFO     | exitmsg: OK
[2026-04-13 04:42:32] 2026-04-13 08:42:00,923 | INFO     | cpuconsumptiontime: 47103 s
[2026-04-13 04:42:32] 2026-04-13 08:42:00,923 | INFO     | nevents: 400
[2026-04-13 04:42:32] 2026-04-13 08:42:00,923 | INFO     | neventsw: 0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,923 | INFO     | pid: 17221
[2026-04-13 04:42:32] 2026-04-13 08:42:00,923 | INFO     | pgrp: 17221
[2026-04-13 04:42:32] 2026-04-13 08:42:00,923 | INFO     | corecount: 12
[2026-04-13 04:42:32] 2026-04-13 08:42:00,924 | INFO     | event service: False
[2026-04-13 04:42:32] 2026-04-13 08:42:00,924 | INFO     | sizes: {0: 2279064, 1: 2281550, 12: 2281550, 4411: 2307676, 4412: 2307675, 4413: 2316729, 4415: 2317135}
[2026-04-13 04:42:32] 2026-04-13 08:42:00,924 | INFO     | --------------------------------------------------
[2026-04-13 04:42:32] 2026-04-13 08:42:00,924 | INFO     | 
[2026-04-13 04:42:32] 2026-04-13 08:42:00,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 04:42:32] 2026-04-13 08:42:00,948 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,948 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,951 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,951 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 04:42:32] 2026-04-13 08:42:00,951 | INFO     | job 7089057599 has completed (purged errors)
[2026-04-13 04:42:32] 2026-04-13 08:42:00,951 | INFO     | overall cleanup function is called
[2026-04-13 04:42:32] 2026-04-13 08:42:01,959 | INFO     | --- collectZombieJob: --- 10, [17221]
[2026-04-13 04:42:32] 2026-04-13 08:42:01,960 | INFO     | zombie collector waiting for pid 17221
[2026-04-13 04:42:32] 2026-04-13 08:42:01,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 04:42:32] 2026-04-13 08:42:01,960 | INFO     | collected zombie processes
[2026-04-13 04:42:32] 2026-04-13 08:42:01,960 | INFO     | will attempt to kill all subprocesses of pid=17221
[2026-04-13 04:42:32] 2026-04-13 08:42:02,050 | INFO     | process IDs to be killed: [17221] (in reverse order)
[2026-04-13 04:42:32] 2026-04-13 08:42:02,111 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 04:42:32] 2026-04-13 08:42:02,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 04:42:32] 2026-04-13 08:42:02,115 | INFO     | did not find any defunct processes belonging to 17221
[2026-04-13 04:42:32] 2026-04-13 08:42:02,118 | INFO     | did not find any defunct processes belonging to 17221
[2026-04-13 04:42:32] 2026-04-13 08:42:02,119 | INFO     | Ready for new job
[2026-04-13 04:42:32] 2026-04-13 08:42:02,120 | INFO     | **************************************
[2026-04-13 04:42:32] 2026-04-13 08:42:02,120 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 04:42:32] 2026-04-13 08:42:02,120 | INFO     | **************************************
[2026-04-13 04:42:32] 2026-04-13 08:42:02,120 | INFO     | 
[2026-04-13 04:42:32] 2026-04-13 08:42:02,121 | INFO     | architecture information:
[2026-04-13 04:42:32] 2026-04-13 08:42:02,121 | INFO     | executing command: cat /etc/os-release
[2026-04-13 04:42:32] 2026-04-13 08:42:02,136 | INFO     | cat /etc/os-release:
[2026-04-13 04:42:32] NAME="CentOS Linux"
[2026-04-13 04:42:32] VERSION="7 (Core)"
[2026-04-13 04:42:32] ID="centos"
[2026-04-13 04:42:32] ID_LIKE="rhel fedora"
[2026-04-13 04:42:32] VERSION_ID="7"
[2026-04-13 04:42:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 04:42:32] ANSI_COLOR="0;31"
[2026-04-13 04:42:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 04:42:32] HOME_URL="https://www.centos.org/"
[2026-04-13 04:42:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 04:42:32] 
[2026-04-13 04:42:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 04:42:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 04:42:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 04:42:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 04:42:32] 
[2026-04-13 04:42:32] 2026-04-13 08:42:02,136 | INFO     | **************************************
[2026-04-13 04:42:32] 2026-04-13 08:42:02,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 04:42:32] 2026-04-13 08:42:02,654 | INFO     | sufficient remaining disk space (29379002368 B)
[2026-04-13 04:42:32] 2026-04-13 08:42:02,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 04:42:32] 2026-04-13 08:42:02,655 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 04:42:32] 2026-04-13 08:42:02,655 | INFO     | update_server=False
[2026-04-13 04:42:32] 2026-04-13 08:42:02,655 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 04:42:32] 2026-04-13 08:42:02,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 04:42:32] 2026-04-13 08:42:02,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 04:42:32] 2026-04-13 08:42:02,834 | INFO     | all data control threads have been joined
[2026-04-13 04:42:32] 2026-04-13 08:42:03,096 | INFO     | all job control threads have been joined
[2026-04-13 04:42:32] 2026-04-13 08:42:03,152 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 04:42:32] 2026-04-13 08:42:03,152 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 04:42:32] 2026-04-13 08:42:03,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 04:42:32] 2026-04-13 08:42:03,153 | INFO     | will abort loop
[2026-04-13 04:42:32] 2026-04-13 08:42:03,652 | INFO     | all payload control threads have been joined
[2026-04-13 04:42:32] 2026-04-13 08:42:03,661 | INFO     | [job] retrieve thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:03,661 | INFO     | [job] queue monitor thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:03,839 | INFO     | [data] control thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:03,886 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,025 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 04:42:32] 2026-04-13 08:42:04,102 | INFO     | [job] control thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,140 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,158 | INFO     | [job] job monitor thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,404 | INFO     | [data] copytool_in thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,631 | INFO     | [payload] failed_post thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,657 | INFO     | [payload] control thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:04,959 | INFO     | [job] validate thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:05,133 | INFO     | [payload] validate_post thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:06,091 | INFO     | [data] copytool_out thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:06,662 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:13,617 | INFO     | job.realtimelogging is not enabled
[2026-04-13 04:42:32] 2026-04-13 08:42:14,622 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 04:42:32] 2026-04-13 08:42:20,678 | INFO     | [monitor] cgroup control has ended
[2026-04-13 04:42:32] 2026-04-13 08:42:20,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662633342784)>', '<ExcThread(monitor, started 139662018451200)>']
[2026-04-13 04:42:32] 2026-04-13 08:42:25,747 | INFO     | all workflow threads have been joined
[2026-04-13 04:42:32] 2026-04-13 08:42:25,747 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 04:42:32] 2026-04-13 08:42:25,753 | INFO     | traces error code: 0
[2026-04-13 04:42:32] 2026-04-13 08:42:25,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 04:42:32] 2026-04-13 08:42:32,632 | INFO     | PID=12838 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-13 04:42:32] 2026-04-13 08:42:32,632 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 04:42:32] 2026-04-13 08:42:32,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 04:42:32] 2026-04-13 08:42:32,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 04:42:32] 2026-04-13 08:42:32,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 04:42:32] 2026-04-13 08:42:32,633 | INFO     | [monitor] control thread has ended
[2026-04-13 04:42:32] 2026-04-13 08:42:32,720 [wrapper] ==== pilot stdout END ====
[2026-04-13 04:42:32] 2026-04-13 08:42:32,724 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 04:42:32] 2026-04-13 08:42:32,727 [wrapper] pilotpid: 12838
[2026-04-13 04:42:32] 2026-04-13 08:42:32,731 [wrapper] Pilot exit status: 0
[2026-04-13 04:42:32] 2026-04-13 08:42:32,746 [wrapper] pandaids: 7089057599
[2026-04-13 04:42:32] 2026-04-13 08:42:32,784 [wrapper] cleanup supervisor_pilot  3163 12839
[2026-04-13 04:42:32] 2026-04-13 08:42:32,789 [wrapper] Test setup, not cleaning
[2026-04-13 04:42:32] 2026-04-13 08:42:32,792 [wrapper] apfmon messages muted
[2026-04-13 04:42:32] 2026-04-13 08:42:32,796 [wrapper] ==== wrapper stdout END ====
[2026-04-13 04:42:32] 2026-04-13 08:42:32,800 [wrapper] ==== wrapper stderr END ====
[2026-04-13 04:42:32]  *** Error codes and diagnostics ***
[2026-04-13 04:42:32]     "exeErrorCode": 0,
[2026-04-13 04:42:32]     "pilotErrorCode": 0,
[2026-04-13 04:42:32]  *** Listing of results directory ***
[2026-04-13 04:42:32] total 416984
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas    644190 Apr 13 01:37 pilot3.tar.gz
[2026-04-13 04:42:32] -rwx------ 1 boincer umatlas     36322 Apr 13 01:37 runpilot2-wrapper.sh
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas      5094 Apr 13 01:40 queuedata.json
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas       100 Apr 13 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 04:42:32] -rwxr-xr-x 1 boincer umatlas      7986 Apr 13 03:27 run_atlas
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas       105 Apr 13 03:27 job.xml
[2026-04-13 04:42:32] -rw-r--r-- 2 boincer umatlas 222693355 Apr 13 03:27 EVNT.49263189._001819.pool.root.1
[2026-04-13 04:42:32] -rw-r--r-- 2 boincer umatlas     15665 Apr 13 03:27 start_atlas.sh
[2026-04-13 04:42:32] drwxrwx--x 2 boincer umatlas      4096 Apr 13 03:27 shared
[2026-04-13 04:42:32] -rw-r--r-- 2 boincer umatlas    656924 Apr 13 03:27 input.tar.gz
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas         0 Apr 13 03:27 boinc_lockfile
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas      2578 Apr 13 03:27 pandaJob.out
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas        57 Apr 13 03:27 setup.sh.local
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas    997783 Apr 13 03:28 agis_schedconf.cvmfs.json
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas   1511579 Apr 13 03:28 agis_ddmendpoints.agis.ALL.json
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas       444 Apr 13 03:28 workernode_map.json
[2026-04-13 04:42:32] drwx------ 5 boincer umatlas      4096 Apr 13 03:28 pilot3
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas      5867 Apr 13 04:37 init_data.xml
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas 198637707 Apr 13 04:41 HITS.49263191._066686.pool.root.1
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas       487 Apr 13 04:41 boinc_task_state.xml
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas      1045 Apr 13 04:41 memory_monitor_summary.json
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas    371003 Apr 13 04:41 log.49263191._066686.job.log.tgz.1
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas      6441 Apr 13 04:42 heartbeat_new.json
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas      6332 Apr 13 04:42 heartbeat.json
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 04:42 boinc_mmap_file
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas        27 Apr 13 04:42 wrapper_checkpoint.txt
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas        95 Apr 13 04:42 pilot_heartbeat.json
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas       745 Apr 13 04:42 pilotlog.txt
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas    432856 Apr 13 04:42 log.49263191._066686.job.log.1
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas       357 Apr 13 04:42 output.list
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas       410 Apr 13 04:42 runtime_log
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas    819200 Apr 13 04:42 result.tar.gz
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas      8960 Apr 13 04:42 runtime_log.err
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas       658 Apr 13 04:42 812c21fffc04.diag
[2026-04-13 04:42:32] -rw-r--r-- 1 boincer umatlas     22315 Apr 13 04:42 stderr.txt
[2026-04-13 04:42:32] HITS file was successfully produced:
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas 198637707 Apr 13 04:41 shared/HITS.pool.root.1
[2026-04-13 04:42:32]  *** Contents of shared directory: ***
[2026-04-13 04:42:32] total 412924
[2026-04-13 04:42:32] -rw-r--r-- 2 boincer umatlas 222693355 Apr 13 03:27 ATLAS.root_0
[2026-04-13 04:42:32] -rw-r--r-- 2 boincer umatlas     15665 Apr 13 03:27 start_atlas.sh
[2026-04-13 04:42:32] -rw-r--r-- 2 boincer umatlas    656924 Apr 13 03:27 input.tar.gz
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas 198637707 Apr 13 04:41 HITS.pool.root.1
[2026-04-13 04:42:32] -rw------- 1 boincer umatlas    819200 Apr 13 04:42 result.tar.gz
04:42:34 (8793): run_atlas exited; CPU time 47081.083776
04:42:34 (8793): called boinc_finish(0)

</stderr_txt>
]]>

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