Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:42:32 (2571): wrapper (7.7.26015): starting
17:42:32 (2571): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 17:42:32] Arguments: --nthreads 8
[2026-04-13 17:42:32] Threads: 8
[2026-04-13 17:42:32] Checking for CVMFS
[2026-04-13 17:42:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 17:42:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 17:42:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 17:42:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 17:42:36] 2.11.2.0 15102 17407 102388 158421 2 54 17943265 25165825 96 130560 0 4410604 99.695 6464106 10920 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-13 17:42:36] CVMFS is ok
[2026-04-13 17:42:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 17:42:36] Checking for apptainer binary...
[2026-04-13 17:42:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 17:42:36] Running /usr/bin/apptainer --version
[2026-04-13 17:42:37] apptainer version 1.3.2-1.el7
[2026-04-13 17:42:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 17:42:58] cg-vwn362.simple-grid.lan
[2026-04-13 17:42:58] apptainer works
[2026-04-13 17:42:58] Set ATHENA_PROC_NUMBER=8
[2026-04-13 17:42:58] Set ATHENA_CORE_NUMBER=8
[2026-04-13 17:42:58] Starting ATLAS job with PandaID=7089056792
[2026-04-13 17:42:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 20:34:48]  *** The last 200 lines of the pilot log: ***
[2026-04-13 20:34:48] 2026-04-13 18:34:07,359 | INFO     | this job has now completed (state=finished)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,359 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,359 | INFO     | log transfer has been attempted: DONE
[2026-04-13 20:34:48] 2026-04-13 18:34:07,359 | INFO     | job 7089056792 has finished - writing final server update
[2026-04-13 20:34:48] 2026-04-13 18:34:07,359 | INFO     | total number of processed events: 400 (read)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,361 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7089056792/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,362 | INFO     | extracted standard info from prmon json
[2026-04-13 20:34:48] 2026-04-13 18:34:07,362 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 20:34:48] 2026-04-13 18:34:07,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 20:34:48] 2026-04-13 18:34:07,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 20:34:48] 2026-04-13 18:34:07,366 | INFO     | fitting pss+swap vs Time
[2026-04-13 20:34:48] 2026-04-13 18:34:07,367 | INFO     | sum of square deviations: 1318277740.5
[2026-04-13 20:34:48] 2026-04-13 18:34:07,368 | INFO     | sum of deviations: 498816123.5000019
[2026-04-13 20:34:48] 2026-04-13 18:34:07,368 | INFO     | mean x (centered): 0.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,368 | INFO     | mean y: 2484263.524691358
[2026-04-13 20:34:48] 2026-04-13 18:34:07,368 | INFO     | intersect: 2484263.524691358
[2026-04-13 20:34:48] 2026-04-13 18:34:07,369 | INFO     | chi2: 2.3385653305482004
[2026-04-13 20:34:48] 2026-04-13 18:34:07,369 | INFO     | sum of square deviations: 1199940638.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,370 | INFO     | sum of deviations: 11038991514.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,370 | INFO     | mean x (centered): 0.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,370 | INFO     | mean y: 2497501.6305732485
[2026-04-13 20:34:48] 2026-04-13 18:34:07,370 | INFO     | intersect: 2497501.6305732485
[2026-04-13 20:34:48] 2026-04-13 18:34:07,371 | INFO     | chi2: 1.5744585576382593
[2026-04-13 20:34:48] 2026-04-13 18:34:07,371 | INFO     | current chi2=1.5744585576382593 (change=32.67416834281133 %)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,371 | INFO     | sum of square deviations: 1088905998.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,372 | INFO     | sum of deviations: 10683828743.500004
[2026-04-13 20:34:48] 2026-04-13 18:34:07,372 | INFO     | mean x (centered): 0.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,372 | INFO     | mean y: 2497013.861842105
[2026-04-13 20:34:48] 2026-04-13 18:34:07,372 | INFO     | intersect: 2497013.861842105
[2026-04-13 20:34:48] 2026-04-13 18:34:07,373 | INFO     | chi2: 1.5760574654437318
[2026-04-13 20:34:48] 2026-04-13 18:34:07,373 | INFO     | current chi2=1.5760574654437318 (change=-0.1015528670294743 %)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,373 | INFO     | right removable region: 151
[2026-04-13 20:34:48] 2026-04-13 18:34:07,373 | INFO     | sum of square deviations: 1199940638.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,374 | INFO     | sum of deviations: -23488560570.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,375 | INFO     | mean x (centered): 0.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,375 | INFO     | mean y: 2514719.8025477706
[2026-04-13 20:34:48] 2026-04-13 18:34:07,375 | INFO     | intersect: 2514719.8025477706
[2026-04-13 20:34:48] 2026-04-13 18:34:07,375 | INFO     | chi2: 0.8937089086605582
[2026-04-13 20:34:48] 2026-04-13 18:34:07,375 | INFO     | current chi2=0.8937089086605582 (change=61.783881040815004 %)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,376 | INFO     | sum of square deviations: 1088905998.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,376 | INFO     | sum of deviations: -18210208549.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,380 | INFO     | mean x (centered): 0.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,380 | INFO     | mean y: 2507455.9342105263
[2026-04-13 20:34:48] 2026-04-13 18:34:07,380 | INFO     | intersect: 2507455.9342105263
[2026-04-13 20:34:48] 2026-04-13 18:34:07,380 | INFO     | chi2: 0.8742251526239128
[2026-04-13 20:34:48] 2026-04-13 18:34:07,380 | INFO     | current chi2=0.8742251526239128 (change=2.180100908454254 %)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,381 | INFO     | left removable region: 10
[2026-04-13 20:34:48] 2026-04-13 18:34:07,381 | INFO     | sum of square deviations: 869188390.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,382 | INFO     | sum of deviations: -7494047518.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,382 | INFO     | mean x (centered): 0.0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,382 | INFO     | mean y: 2522814.503546099
[2026-04-13 20:34:48] 2026-04-13 18:34:07,382 | INFO     | intersect: 2522814.503546099
[2026-04-13 20:34:48] 2026-04-13 18:34:07,383 | INFO     | chi2: 0.079345272758283
[2026-04-13 20:34:48] 2026-04-13 18:34:07,383 | INFO     | current memory leak: -8.62 B/s (using 141 data points, chi2=0.08)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,383 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | ..............................
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . Timing measurements:
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . get job = 0 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . initial setup = 116 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . payload setup = 15 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . stage-in = 0 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . payload execution = 9840 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . stage-out = 2 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | . log creation = 1 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,384 | INFO     | ..............................
[2026-04-13 20:34:48] 2026-04-13 18:34:07,508 | INFO     | 
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | job summary report
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | --------------------------------------------------
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | PanDA job id: 7089056792
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | task id: 49263191
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | errors: (none)
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | pilot state: finished 
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | transexitcode: 0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | exeerrorcode: 0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,509 | INFO     | exeerrordiag: 
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | exitcode: 0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | exitmsg: OK
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | cpuconsumptiontime: 54376 s
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | nevents: 400
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | neventsw: 0
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | pid: 10985
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | pgrp: 10985
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | corecount: 8
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | event service: False
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | sizes: {0: 2279064, 1: 2279749, 2: 2281578, 13: 2281578, 9860: 2310207, 9863: 2319205, 9865: 2319389, 9869: 2319647}
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | --------------------------------------------------
[2026-04-13 20:34:48] 2026-04-13 18:34:07,510 | INFO     | 
[2026-04-13 20:34:48] 2026-04-13 18:34:07,511 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-04-13 20:34:48] 2026-04-13 18:34:08,228 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,228 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,230 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 20:34:48] 2026-04-13 18:34:08,231 | INFO     | job 7089056792 has completed (purged errors)
[2026-04-13 20:34:48] 2026-04-13 18:34:08,231 | INFO     | overall cleanup function is called
[2026-04-13 20:34:48] 2026-04-13 18:34:09,239 | INFO     | --- collectZombieJob: --- 10, [10985]
[2026-04-13 20:34:48] 2026-04-13 18:34:09,239 | INFO     | zombie collector waiting for pid 10985
[2026-04-13 20:34:48] 2026-04-13 18:34:09,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 20:34:48] 2026-04-13 18:34:09,239 | INFO     | collected zombie processes
[2026-04-13 20:34:48] 2026-04-13 18:34:09,239 | INFO     | will attempt to kill all subprocesses of pid=10985
[2026-04-13 20:34:48] 2026-04-13 18:34:09,325 | INFO     | process IDs to be killed: [10985] (in reverse order)
[2026-04-13 20:34:48] 2026-04-13 18:34:10,368 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 20:34:48] 2026-04-13 18:34:10,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 20:34:48] 2026-04-13 18:34:10,371 | INFO     | did not find any defunct processes belonging to 10985
[2026-04-13 20:34:48] 2026-04-13 18:34:10,373 | INFO     | did not find any defunct processes belonging to 10985
[2026-04-13 20:34:48] 2026-04-13 18:34:10,373 | INFO     | Ready for new job
[2026-04-13 20:34:48] 2026-04-13 18:34:10,375 | INFO     | **************************************
[2026-04-13 20:34:48] 2026-04-13 18:34:10,375 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 20:34:48] 2026-04-13 18:34:10,375 | INFO     | **************************************
[2026-04-13 20:34:48] 2026-04-13 18:34:10,375 | INFO     | 
[2026-04-13 20:34:48] 2026-04-13 18:34:10,376 | INFO     | pilot is running in a VM
[2026-04-13 20:34:48] 2026-04-13 18:34:10,376 | INFO     | architecture information:
[2026-04-13 20:34:48] 2026-04-13 18:34:10,384 | INFO     | executing command: cat /etc/os-release
[2026-04-13 20:34:48] 2026-04-13 18:34:10,498 | INFO     | cat /etc/os-release:
[2026-04-13 20:34:48] NAME="CentOS Linux"
[2026-04-13 20:34:48] VERSION="7 (Core)"
[2026-04-13 20:34:48] ID="centos"
[2026-04-13 20:34:48] ID_LIKE="rhel fedora"
[2026-04-13 20:34:48] VERSION_ID="7"
[2026-04-13 20:34:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 20:34:48] ANSI_COLOR="0;31"
[2026-04-13 20:34:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 20:34:48] HOME_URL="https://www.centos.org/"
[2026-04-13 20:34:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 20:34:48] 
[2026-04-13 20:34:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 20:34:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 20:34:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 20:34:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 20:34:48] 
[2026-04-13 20:34:48] 2026-04-13 18:34:10,498 | INFO     | **************************************
[2026-04-13 20:34:48] 2026-04-13 18:34:11,004 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-04-13 20:34:48] 2026-04-13 18:34:11,319 | INFO     | sufficient remaining disk space (494613299200 B)
[2026-04-13 20:34:48] 2026-04-13 18:34:11,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 20:34:48] 2026-04-13 18:34:11,320 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 20:34:48] 2026-04-13 18:34:11,320 | INFO     | update_server=False
[2026-04-13 20:34:48] 2026-04-13 18:34:11,320 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 20:34:48] 2026-04-13 18:34:11,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 20:34:48] 2026-04-13 18:34:11,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 20:34:48] 2026-04-13 18:34:11,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 20:34:48] 2026-04-13 18:34:11,324 | INFO     | aborting loop
[2026-04-13 20:34:48] 2026-04-13 18:34:11,766 | INFO     | all data control threads have been joined
[2026-04-13 20:34:48] 2026-04-13 18:34:12,010 | INFO     | all job control threads have been joined
[2026-04-13 20:34:48] 2026-04-13 18:34:12,317 | INFO     | all payload control threads have been joined
[2026-04-13 20:34:48] 2026-04-13 18:34:12,326 | INFO     | [job] retrieve thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,330 | INFO     | [job] job monitor thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,501 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 20:34:48] 2026-04-13 18:34:12,593 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,620 | INFO     | [data] copytool_in thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,738 | INFO     | [payload] validate_post thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,772 | INFO     | [data] control thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,844 | INFO     | [payload] failed_post thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:12,861 | INFO     | [job] validate thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:13,016 | INFO     | [job] control thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:13,323 | INFO     | [payload] control thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:13,328 | INFO     | [data] copytool_out thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:13,360 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:13,372 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:13,529 | INFO     | [job] queue monitor thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:15,333 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 20:34:48] 2026-04-13 18:34:41,093 | INFO     | PID=6546 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-13 20:34:48] 2026-04-13 18:34:41,093 | INFO     | .. there are 2 such processes running
[2026-04-13 20:34:48] 2026-04-13 18:34:41,093 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 20:34:48] 2026-04-13 18:34:41,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 20:34:48] 2026-04-13 18:34:41,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 20:34:48] 2026-04-13 18:34:41,736 | INFO     | [monitor] cgroup control has ended
[2026-04-13 20:34:48] 2026-04-13 18:34:42,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764669712192)>', '<ExcThread(monitor, started 139764367861504)>']
[2026-04-13 20:34:48] 2026-04-13 18:34:42,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 20:34:48] 2026-04-13 18:34:42,100 | INFO     | [monitor] control thread has ended
[2026-04-13 20:34:48] 2026-04-13 18:34:47,029 | INFO     | all workflow threads have been joined
[2026-04-13 20:34:48] 2026-04-13 18:34:47,029 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 20:34:48] 2026-04-13 18:34:47,029 | INFO     | traces error code: 0
[2026-04-13 20:34:48] 2026-04-13 18:34:47,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 20:34:48] 2026-04-13 18:34:47,196 [wrapper] ==== pilot stdout END ====
[2026-04-13 20:34:48] 2026-04-13 18:34:47,202 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 20:34:48] 2026-04-13 18:34:47,209 [wrapper] pilotpid: 6546
[2026-04-13 20:34:48] 2026-04-13 18:34:47,216 [wrapper] Pilot exit status: 0
[2026-04-13 20:34:48] 2026-04-13 18:34:47,386 [wrapper] pandaids: 7089056792
[2026-04-13 20:34:48] 2026-04-13 18:34:47,507 [wrapper] cleanup supervisor_pilot  2672 6547
[2026-04-13 20:34:48] 2026-04-13 18:34:47,524 [wrapper] Test setup, not cleaning
[2026-04-13 20:34:48] 2026-04-13 18:34:47,543 [wrapper] apfmon messages muted
[2026-04-13 20:34:48] 2026-04-13 18:34:47,548 [wrapper] ==== wrapper stdout END ====
[2026-04-13 20:34:48] 2026-04-13 18:34:47,552 [wrapper] ==== wrapper stderr END ====
[2026-04-13 20:34:48]  *** Error codes and diagnostics ***
[2026-04-13 20:34:48]     "exeErrorCode": 0,
[2026-04-13 20:34:48]     "pilotErrorCode": 0,
[2026-04-13 20:34:48]  *** Listing of results directory ***
[2026-04-13 20:34:48] total 412736
[2026-04-13 20:34:48] -rwx------. 1 boinc boinc     36322 Apr 13 07:36 runpilot2-wrapper.sh
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc    644190 Apr 13 07:37 pilot3.tar.gz
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc      5094 Apr 13 07:37 queuedata.json
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc       100 Apr 13 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 20:34:48] -rwxr-xr-x. 1 boinc boinc      7986 Apr 13 17:42 run_atlas
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc       105 Apr 13 17:42 job.xml
[2026-04-13 20:34:48] -rw-r--r--. 2 boinc boinc 224512020 Apr 13 17:42 EVNT.49263189._001797.pool.root.1
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc      6307 Apr 13 17:42 init_data.xml
[2026-04-13 20:34:48] -rw-r--r--. 2 boinc boinc     15665 Apr 13 17:42 start_atlas.sh
[2026-04-13 20:34:48] drwxrwx--x. 2 boinc boinc        68 Apr 13 17:42 shared
[2026-04-13 20:34:48] -rw-r--r--. 2 boinc boinc    656921 Apr 13 17:42 input.tar.gz
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc         0 Apr 13 17:42 boinc_lockfile
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc      2578 Apr 13 17:42 pandaJob.out
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc   1511579 Apr 13 17:47 agis_ddmendpoints.agis.ALL.json
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc       415 Apr 13 17:49 workernode_map.json
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc    997518 Apr 13 17:49 agis_schedconf.cvmfs.json
[2026-04-13 20:34:48] drwx------. 5 boinc boinc      4096 Apr 13 17:49 pilot3
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc 191493720 Apr 13 20:33 HITS.49263191._066136.pool.root.1
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc       489 Apr 13 20:33 boinc_task_state.xml
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc      1021 Apr 13 20:33 memory_monitor_summary.json
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc    364419 Apr 13 20:34 log.49263191._066136.job.log.tgz.1
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc        95 Apr 13 20:34 pilot_heartbeat.json
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc      6342 Apr 13 20:34 heartbeat_new.json
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc      6233 Apr 13 20:34 heartbeat.json
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc      8192 Apr 13 20:34 boinc_mmap_file
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc        28 Apr 13 20:34 wrapper_checkpoint.txt
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc      4878 Apr 13 20:34 pilotlog.txt
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc    932479 Apr 13 20:34 log.49263191._066136.job.log.1
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc       357 Apr 13 20:34 output.list
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc       410 Apr 13 20:34 runtime_log
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc   1310720 Apr 13 20:34 result.tar.gz
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc      8438 Apr 13 20:34 runtime_log.err
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc       654 Apr 13 20:34 80dac4cbed64.diag
[2026-04-13 20:34:48] -rw-r--r--. 1 boinc boinc     20619 Apr 13 20:34 stderr.txt
[2026-04-13 20:34:48] HITS file was successfully produced:
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc 191493720 Apr 13 20:33 shared/HITS.pool.root.1
[2026-04-13 20:34:48]  *** Contents of shared directory: ***
[2026-04-13 20:34:48] total 408200
[2026-04-13 20:34:48] -rw-r--r--. 2 boinc boinc 224512020 Apr 13 17:42 ATLAS.root_0
[2026-04-13 20:34:48] -rw-r--r--. 2 boinc boinc     15665 Apr 13 17:42 start_atlas.sh
[2026-04-13 20:34:48] -rw-r--r--. 2 boinc boinc    656921 Apr 13 17:42 input.tar.gz
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc 191493720 Apr 13 20:33 HITS.pool.root.1
[2026-04-13 20:34:48] -rw-------. 1 boinc boinc   1310720 Apr 13 20:34 result.tar.gz
20:34:49 (2571): run_atlas exited; CPU time 54464.380451
20:34:49 (2571): called boinc_finish(0)

</stderr_txt>
]]>

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