Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-13 18:58:17 (5748): vboxwrapper version 26210
2026-04-13 18:58:17 (5748): BOINC client version: 8.2.8
2026-04-13 18:58:18 (5748): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-04-13 18:58:18 (5748): Successfully copied 'init_data.xml' to the shared directory.
2026-04-13 18:58:18 (5748): Create VM. (boinc_95d38ea5ae187c86, slot#3)
2026-04-13 18:58:19 (5748): Setting Memory Size for VM. (4000MB)
2026-04-13 18:58:19 (5748): Setting CPU Count for VM. (4)
2026-04-13 18:58:19 (5748): Setting Chipset Options for VM.
2026-04-13 18:58:20 (5748): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-13 18:58:20 (5748): Setting Boot Options for VM.
2026-04-13 18:58:20 (5748): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-13 18:58:21 (5748): Enabling VM Network Access.
2026-04-13 18:58:21 (5748): Disabling USB Support for VM.
2026-04-13 18:58:21 (5748): Disabling COM Port Support for VM.
2026-04-13 18:58:21 (5748): Disabling LPT Port Support for VM.
2026-04-13 18:58:22 (5748): Disabling Audio Support for VM.
2026-04-13 18:58:22 (5748): Disabling Clipboard Support for VM.
2026-04-13 18:58:22 (5748): Disabling Drag and Drop Support for VM.
2026-04-13 18:58:22 (5748): Adding storage controller(s) to VM.
2026-04-13 18:58:23 (5748): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-13 18:58:23 (5748): Adding VirtualBox Guest Additions to VM.
2026-04-13 18:58:24 (5748): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-13 18:58:24 (5748): forwarding host port 63674 to guest port 80
2026-04-13 18:58:24 (5748): Enabling remote desktop for VM.
2026-04-13 18:58:25 (5748): Enabling shared directory for VM.
2026-04-13 18:58:25 (5748): Starting VM using VBoxManage interface. (boinc_95d38ea5ae187c86, slot#3)
2026-04-13 18:58:32 (5748): Successfully started VM. (PID = '10676')
2026-04-13 18:58:32 (5748): Reporting VM Process ID to BOINC.
2026-04-13 18:58:32 (5748): Guest Log: BIOS: VirtualBox 7.2.2
2026-04-13 18:58:32 (5748): Guest Log: CPUID EDX: 0x178bfbff
2026-04-13 18:58:32 (5748): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-13 18:58:32 (5748): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-13 18:58:32 (5748): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-13 18:58:32 (5748): Detected: Web Application Enabled (http://localhost:63674)
2026-04-13 18:58:32 (5748): Detected: Remote Desktop Enabled (localhost:63675)
2026-04-13 18:58:32 (5748): Preference change detected
2026-04-13 18:58:32 (5748): Setting CPU throttle for VM. (100%)
2026-04-13 18:58:32 (5748): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-13 18:58:34 (5748): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-13 18:58:34 (5748): Guest Log: BIOS: Booting from Hard Disk...
2026-04-13 18:58:37 (5748): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-13 18:58:37 (5748): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-13 18:58:37 (5748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-13 18:58:47 (5748): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-13 18:58:47 (5748): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-13 18:58:55 (5748): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000143 main     Log opened 2026-04-13T18:58:53.315392000Z
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000270 main     OS Product: Linux
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000304 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000328 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000351 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000352 main     Process ID: 1298
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.000353 main     Package type: LINUX_64BITS_GENERIC
2026-04-13 18:58:55 (5748): Guest Log: 00:00:00.003712 main     5.2.32 r132073 started. Verbose level = 0
2026-04-13 18:58:55 (5748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-13 18:58:55 (5748): Guest Log: [INFO] Mounting shared directory
2026-04-13 18:58:55 (5748): Guest Log: [INFO] Checking for init_data.xml
2026-04-13 18:58:59 (5748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-13 18:58:59 (5748): Guest Log: [INFO] Detected branch: prod
2026-04-13 18:58:59 (5748): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-13 18:58:59 (5748): Guest Log: Copying input files
2026-04-13 18:59:00 (5748): Guest Log: Copied input files into RunAtlas.
2026-04-13 18:59:00 (5748): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-13 18:59:00 (5748): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-13 18:59:00 (5748): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-13 18:59:00 (5748): Guest Log: Further information can be found at the LHC@home message board.
2026-04-13 18:59:05 (5748): Guest Log: 00:00:10.012834 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 976 252 000ns (GuestNow=1 776 099 544 346 389 000 ns GuestLast=1 776 106 733 322 641 000 ns fSetTimeLastLoop=true )
2026-04-13 19:00:00 (5748): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-13 19:00:00 (5748): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-13 19:00:00 (5748): Guest Log: 2.6.3.0 1573 1 32200 158423 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-13 19:00:01 (5748): Guest Log: copied the webapp to /var/www
2026-04-13 19:00:01 (5748): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-13 19:00:01 (5748): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-13 19:00:01 (5748): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-13 19:00:01 (5748): Guest Log:  *** Starting ATLAS job. (PandaID=7089023050 taskID=49645815) ***
2026-04-13 20:38:35 (5748): Status Report: Elapsed Time: '6000.000000'
2026-04-13 20:38:35 (5748): Status Report: CPU Time: '21785.406250'
2026-04-13 22:18:38 (5748): Status Report: Elapsed Time: '12000.000000'
2026-04-13 22:18:38 (5748): Status Report: CPU Time: '45649.812500'
2026-04-13 23:58:41 (5748): Status Report: Elapsed Time: '18000.000000'
2026-04-13 23:58:41 (5748): Status Report: CPU Time: '69514.328125'
2026-04-14 00:49:48 (5748): Guest Log:  *** Job finished ***
2026-04-14 00:49:48 (5748): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:25,442 | INFO     | all workflow threads have been joined
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:25,442 | INFO     | end of generic workflow (traces error code: 0)
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:25,442 | INFO     | traces error code: 0
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:25,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,562 | INFO     | PID=5993 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,563 | INFO     | found 0 job(s) in 20 queues
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,564 | INFO     | [monitor] control thread has ended
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,724 [wrapper] ==== pilot stdout END ====
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,730 [wrapper] ==== wrapper stdout RESUME ====
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,735 [wrapper] pilotpid: 5993
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,741 [wrapper] Pilot exit status: 0
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,816 [wrapper] pandaids: 7089023050
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,851 [wrapper] cleanup supervisor_pilot 30110 5994
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,868 [wrapper] Test setup, not cleaning
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,874 [wrapper] apfmon messages muted
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,880 [wrapper] ==== wrapper stdout END ====
2026-04-14 00:49:48 (5748): Guest Log: 2026-04-13 22:49:38,886 [wrapper] ==== wrapper stderr END ====
2026-04-14 00:49:48 (5748): Guest Log:  *** Error codes and diagnostics ***
2026-04-14 00:49:48 (5748): Guest Log:     "exeErrorCode": 0,
2026-04-14 00:49:48 (5748): Guest Log:     "pilotErrorCode": 0,
2026-04-14 00:49:48 (5748): Guest Log:  *** Listing of results directory ***
2026-04-14 00:49:48 (5748): Guest Log: total 204124
2026-04-14 00:49:48 (5748): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 13 05:03 pilot3.tar.gz
2026-04-14 00:49:48 (5748): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 13 05:07 runpilot2-wrapper.sh
2026-04-14 00:49:48 (5748): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 13 05:12 queuedata.json
2026-04-14 00:49:48 (5748): Guest Log: -rwxr-xr-x. 1 atlas atlas     10289 Apr 13 16:58 init_data.xml
2026-04-14 00:49:48 (5748): Guest Log: -rwxr-xr-x. 1 atlas atlas    656949 Apr 13 16:58 input.tar.gz
2026-04-14 00:49:48 (5748): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 13 16:58 start_atlas.sh
2026-04-14 00:49:48 (5748): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 16:58 EVNT.48629115._000487.pool.root.1 -> /data/./ATLAS.root_0
2026-04-14 00:49:48 (5748): Guest Log: -rw-r--r--. 1 atlas atlas      2629 Apr 13 17:00 pandaJob.out
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas    997526 Apr 13 17:00 agis_schedconf.cvmfs.json
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas       422 Apr 13 17:00 workernode_map.json
2026-04-14 00:49:48 (5748): Guest Log: drwx------. 5 atlas atlas      4096 Apr 13 17:00 pilot3
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas 200489150 Apr 13 22:48 HITS.49645815._012186.pool.root.1
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 13 22:48 memory_monitor_summary.json
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 13 22:49 agis_ddmendpoints.agis.ALL.json
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas    396881 Apr 13 22:49 log.49645815._012186.job.log.tgz.1
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas      6382 Apr 13 22:49 heartbeat_new.json
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas      6273 Apr 13 22:49 heartbeat.json
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 22:49 pilot_heartbeat.json
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas       744 Apr 13 22:49 pilotlog.txt
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas   1878026 Apr 13 22:49 log.49645815._012186.job.log.1
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 22:49 output.list
2026-04-14 00:49:48 (5748): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 13 22:49 runtime_log
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas   2293760 Apr 13 22:49 result.tar.gz
2026-04-14 00:49:48 (5748): Guest Log: -rw-r--r--. 1 atlas atlas      8347 Apr 13 22:49 runtime_log.err
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas       649 Apr 13 22:49 7a11f9f120c2.diag
2026-04-14 00:49:48 (5748): Guest Log: Looking for outputfile HITS.49645815._012186.pool.root.1
2026-04-14 00:49:48 (5748): Guest Log: HITS file was successfully produced
2026-04-14 00:49:48 (5748): Guest Log: -rw-------. 1 atlas atlas 200489150 Apr 13 22:48 /home/atlas/RunAtlas/HITS.49645815._012186.pool.root.1
2026-04-14 00:49:49 (5748): Guest Log: Successfully finished the ATLAS job!
2026-04-14 00:49:49 (5748): Guest Log: Copying the results back to the shared directory!
2026-04-14 00:49:49 (5748): Guest Log:  *** Contents of shared directory: ***
2026-04-14 00:49:49 (5748): Guest Log: total 418848
2026-04-14 00:49:49 (5748): Guest Log: -rwxrwxrwx. 1 root root 225425971 Apr 13 16:58 ATLAS.root_0
2026-04-14 00:49:49 (5748): Guest Log: -rwxrwxrwx. 1 root root 200489150 Apr 13  2026 HITS.pool.root.1
2026-04-14 00:49:49 (5748): Guest Log: -rwxrwxrwx. 1 root root     10289 Apr 13 16:58 init_data.xml
2026-04-14 00:49:49 (5748): Guest Log: -rwxrwxrwx. 1 root root    656949 Apr 13 06:48 input.tar.gz
2026-04-14 00:49:49 (5748): Guest Log: -rwxrwxrwx. 1 root root   2293760 Apr 13  2026 result.tar.gz
2026-04-14 00:49:49 (5748): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 13 06:48 start_atlas.sh
2026-04-14 00:49:49 (5748): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-14 00:49:49 (5748): VM Completion File Detected.
2026-04-14 00:49:49 (5748): Powering off VM.
2026-04-14 00:49:49 (5748): Successfully stopped VM.
2026-04-14 00:49:49 (5748): Deregistering VM. (boinc_95d38ea5ae187c86, slot#3)
2026-04-14 00:49:50 (5748): Removing network bandwidth throttle group from VM.
2026-04-14 00:49:50 (5748): Removing VM from VirtualBox.
2026-04-14 00:49:55 (5748): called boinc_finish(0)

</stderr_txt>
]]>

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