Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
06:50:56 (19795): wrapper (7.7.26015): starting
06:50:56 (19795): wrapper: running run_atlas (--nthreads 4)
[2026-04-13 06:50:56] Arguments: --nthreads 4
[2026-04-13 06:50:56] Threads: 4
[2026-04-13 06:50:56] Checking for CVMFS
[2026-04-13 06:51:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 06:51:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 06:51:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 06:51:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 06:51:19] 2.12.7.0 20017 0 25224 158404 3 1 2213186 4194304 0 130560 0 0 0.000 1337 1586 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-04-13 06:51:19] CVMFS is ok
[2026-04-13 06:51:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 06:51:19] Checking for apptainer binary...
[2026-04-13 06:51:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 06:51:19] Running /usr/bin/apptainer --version
[2026-04-13 06:51:19] apptainer version 1.0.3
[2026-04-13 06:51:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 06:51:19] TeeC06
[2026-04-13 06:51:19] apptainer works
[2026-04-13 06:51:19] Set ATHENA_PROC_NUMBER=4
[2026-04-13 06:51:19] Set ATHENA_CORE_NUMBER=4
[2026-04-13 06:51:19] Starting ATLAS job with PandaID=7088953044
[2026-04-13 06:51:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 09:41:12]  *** The last 200 lines of the pilot log: ***
[2026-04-13 09:41:12] 2026-04-13 08:40:12,411 | INFO     | total number of processed events: 400 (read)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,430 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7088953044/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,431 | INFO     | extracted standard info from prmon json
[2026-04-13 09:41:12] 2026-04-13 08:40:12,431 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 09:41:12] 2026-04-13 08:40:12,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 09:41:12] 2026-04-13 08:40:12,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 09:41:12] 2026-04-13 08:40:12,435 | INFO     | fitting pss+swap vs Time
[2026-04-13 09:41:12] 2026-04-13 08:40:12,436 | INFO     | sum of square deviations: 1418361477.5
[2026-04-13 09:41:12] 2026-04-13 08:40:12,437 | INFO     | sum of deviations: -53487348610.49999
[2026-04-13 09:41:12] 2026-04-13 08:40:12,437 | INFO     | mean x (centered): 0.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,437 | INFO     | mean y: 2438742.3674698793
[2026-04-13 09:41:12] 2026-04-13 08:40:12,437 | INFO     | intersect: 2438742.3674698793
[2026-04-13 09:41:12] 2026-04-13 08:40:12,438 | INFO     | chi2: 2.408659380399796
[2026-04-13 09:41:12] 2026-04-13 08:40:12,438 | INFO     | sum of square deviations: 1294014960.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,440 | INFO     | sum of deviations: -41806696845.99999
[2026-04-13 09:41:12] 2026-04-13 08:40:12,440 | INFO     | mean x (centered): 0.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,440 | INFO     | mean y: 2452782.5279503106
[2026-04-13 09:41:12] 2026-04-13 08:40:12,440 | INFO     | intersect: 2452782.5279503106
[2026-04-13 09:41:12] 2026-04-13 08:40:12,440 | INFO     | chi2: 1.759600381930548
[2026-04-13 09:41:12] 2026-04-13 08:40:12,441 | INFO     | current chi2=1.759600381930548 (change=26.946898500921108 %)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,441 | INFO     | sum of square deviations: 1177156955.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,442 | INFO     | sum of deviations: -39859498125.50001
[2026-04-13 09:41:12] 2026-04-13 08:40:12,442 | INFO     | mean x (centered): 0.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,442 | INFO     | mean y: 2455324.467948718
[2026-04-13 09:41:12] 2026-04-13 08:40:12,443 | INFO     | intersect: 2455324.467948718
[2026-04-13 09:41:12] 2026-04-13 08:40:12,443 | INFO     | chi2: 1.7485706933844938
[2026-04-13 09:41:12] 2026-04-13 08:40:12,443 | INFO     | current chi2=1.7485706933844938 (change=0.6268291743579238 %)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,443 | INFO     | right removable region: 155
[2026-04-13 09:41:12] 2026-04-13 08:40:12,444 | INFO     | sum of square deviations: 1294014960.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,445 | INFO     | sum of deviations: -72278573650.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,445 | INFO     | mean x (centered): 0.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,445 | INFO     | mean y: 2461307.366459627
[2026-04-13 09:41:12] 2026-04-13 08:40:12,445 | INFO     | intersect: 2461307.366459627
[2026-04-13 09:41:12] 2026-04-13 08:40:12,446 | INFO     | chi2: 1.048562645324722
[2026-04-13 09:41:12] 2026-04-13 08:40:12,446 | INFO     | current chi2=1.048562645324722 (change=56.466960257756384 %)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,446 | INFO     | sum of square deviations: 1177156955.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,447 | INFO     | sum of deviations: -65475008891.49999
[2026-04-13 09:41:12] 2026-04-13 08:40:12,447 | INFO     | mean x (centered): 0.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,448 | INFO     | mean y: 2452419.9935897435
[2026-04-13 09:41:12] 2026-04-13 08:40:12,448 | INFO     | intersect: 2452419.9935897435
[2026-04-13 09:41:12] 2026-04-13 08:40:12,448 | INFO     | chi2: 1.0477938466576533
[2026-04-13 09:41:12] 2026-04-13 08:40:12,448 | INFO     | current chi2=1.0477938466576533 (change=0.07331928812233438 %)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,448 | INFO     | left removable region: 10
[2026-04-13 09:41:12] 2026-04-13 08:40:12,449 | INFO     | sum of square deviations: 945282840.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,450 | INFO     | sum of deviations: -51550007185.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,450 | INFO     | mean x (centered): 0.0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,450 | INFO     | mean y: 2471748.917241379
[2026-04-13 09:41:12] 2026-04-13 08:40:12,450 | INFO     | intersect: 2471748.917241379
[2026-04-13 09:41:12] 2026-04-13 08:40:12,451 | INFO     | chi2: 0.35135779388008326
[2026-04-13 09:41:12] 2026-04-13 08:40:12,451 | INFO     | current memory leak: -54.53 B/s (using 145 data points, chi2=0.35)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,451 | INFO     | could have reported an average CPU frequency of 3174 MHz (9 samples)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | ..............................
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | . Timing measurements:
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | . get job = 0 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | . initial setup = 14 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | . payload setup = 5 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | . stage-in = 0 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,452 | INFO     | . payload execution = 10077 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,453 | INFO     | . stage-out = 0 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,453 | INFO     | . log creation = 0 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,453 | INFO     | ..............................
[2026-04-13 09:41:12] 2026-04-13 08:40:12,759 | INFO     | 
[2026-04-13 09:41:12] 2026-04-13 08:40:12,759 | INFO     | job summary report
[2026-04-13 09:41:12] 2026-04-13 08:40:12,760 | INFO     | --------------------------------------------------
[2026-04-13 09:41:12] 2026-04-13 08:40:12,761 | INFO     | PanDA job id: 7088953044
[2026-04-13 09:41:12] 2026-04-13 08:40:12,761 | INFO     | task id: 49263208
[2026-04-13 09:41:12] 2026-04-13 08:40:12,761 | INFO     | errors: (none)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,761 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 09:41:12] 2026-04-13 08:40:12,761 | INFO     | pilot state: finished 
[2026-04-13 09:41:12] 2026-04-13 08:40:12,761 | INFO     | transexitcode: 0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,762 | INFO     | exeerrorcode: 0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,762 | INFO     | exeerrordiag: 
[2026-04-13 09:41:12] 2026-04-13 08:40:12,762 | INFO     | exitcode: 0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,762 | INFO     | exitmsg: OK
[2026-04-13 09:41:12] 2026-04-13 08:40:12,762 | INFO     | cpuconsumptiontime: 38938 s
[2026-04-13 09:41:12] 2026-04-13 08:40:12,762 | INFO     | nevents: 400
[2026-04-13 09:41:12] 2026-04-13 08:40:12,763 | INFO     | neventsw: 0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,763 | INFO     | pid: 28479
[2026-04-13 09:41:12] 2026-04-13 08:40:12,763 | INFO     | pgrp: 28479
[2026-04-13 09:41:12] 2026-04-13 08:40:12,763 | INFO     | corecount: 4
[2026-04-13 09:41:12] 2026-04-13 08:40:12,763 | INFO     | event service: False
[2026-04-13 09:41:12] 2026-04-13 08:40:12,763 | INFO     | sizes: {0: 2279660, 1: 2281545, 11: 2281545, 10087: 2310306, 10088: 2319302, 10090: 2319358, 10091: 2319744}
[2026-04-13 09:41:12] 2026-04-13 08:40:12,764 | INFO     | --------------------------------------------------
[2026-04-13 09:41:12] 2026-04-13 08:40:12,764 | INFO     | 
[2026-04-13 09:41:12] 2026-04-13 08:40:12,764 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-04-13 09:41:12] 2026-04-13 08:40:12,783 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | job 7088953044 has completed (purged errors)
[2026-04-13 09:41:12] 2026-04-13 08:40:12,785 | INFO     | overall cleanup function is called
[2026-04-13 09:41:12] 2026-04-13 08:40:13,792 | INFO     | --- collectZombieJob: --- 10, [28479]
[2026-04-13 09:41:12] 2026-04-13 08:40:13,792 | INFO     | zombie collector waiting for pid 28479
[2026-04-13 09:41:12] 2026-04-13 08:40:13,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 09:41:12] 2026-04-13 08:40:13,793 | INFO     | collected zombie processes
[2026-04-13 09:41:12] 2026-04-13 08:40:13,793 | INFO     | will attempt to kill all subprocesses of pid=28479
[2026-04-13 09:41:12] 2026-04-13 08:40:13,850 | INFO     | process IDs to be killed: [28479] (in reverse order)
[2026-04-13 09:41:12] 2026-04-13 08:40:13,876 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 09:41:12] 2026-04-13 08:40:13,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 09:41:12] 2026-04-13 08:40:13,878 | INFO     | did not find any defunct processes belonging to 28479
[2026-04-13 09:41:12] 2026-04-13 08:40:13,879 | INFO     | did not find any defunct processes belonging to 28479
[2026-04-13 09:41:12] 2026-04-13 08:40:13,879 | INFO     | Ready for new job
[2026-04-13 09:41:12] 2026-04-13 08:40:13,880 | INFO     | **************************************
[2026-04-13 09:41:12] 2026-04-13 08:40:13,880 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 09:41:12] 2026-04-13 08:40:13,880 | INFO     | **************************************
[2026-04-13 09:41:12] 2026-04-13 08:40:13,880 | INFO     | 
[2026-04-13 09:41:12] 2026-04-13 08:40:13,901 | INFO     | architecture information:
[2026-04-13 09:41:12] 2026-04-13 08:40:13,901 | INFO     | executing command: cat /etc/os-release
[2026-04-13 09:41:12] 2026-04-13 08:40:13,910 | INFO     | cat /etc/os-release:
[2026-04-13 09:41:12] NAME="CentOS Linux"
[2026-04-13 09:41:12] VERSION="7 (Core)"
[2026-04-13 09:41:12] ID="centos"
[2026-04-13 09:41:12] ID_LIKE="rhel fedora"
[2026-04-13 09:41:12] VERSION_ID="7"
[2026-04-13 09:41:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 09:41:12] ANSI_COLOR="0;31"
[2026-04-13 09:41:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 09:41:12] HOME_URL="https://www.centos.org/"
[2026-04-13 09:41:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 09:41:12] 
[2026-04-13 09:41:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 09:41:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 09:41:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 09:41:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 09:41:12] 
[2026-04-13 09:41:12] 2026-04-13 08:40:13,910 | INFO     | **************************************
[2026-04-13 09:41:12] 2026-04-13 08:40:14,413 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-04-13 09:41:12] 2026-04-13 08:40:14,424 | INFO     | sufficient remaining disk space (431718662144 B)
[2026-04-13 09:41:12] 2026-04-13 08:40:14,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 09:41:12] 2026-04-13 08:40:14,425 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 09:41:12] 2026-04-13 08:40:14,425 | INFO     | update_server=False
[2026-04-13 09:41:12] 2026-04-13 08:40:14,425 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 09:41:12] 2026-04-13 08:40:14,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 09:41:12] 2026-04-13 08:40:14,439 | INFO     | all data control threads have been joined
[2026-04-13 09:41:12] 2026-04-13 08:40:14,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 09:41:12] 2026-04-13 08:40:14,869 | WARNING  | process 28479 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 09:41:12] 2026-04-13 08:40:14,901 | INFO     | using path: /home/m/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 09:41:12] 2026-04-13 08:40:14,947 | INFO     | number of running child processes to parent process 28479: 1
[2026-04-13 09:41:12] 2026-04-13 08:40:14,947 | INFO     | maximum number of monitored processes: 6
[2026-04-13 09:41:12] 2026-04-13 08:40:14,947 | INFO     | aborting job monitoring since job object (job id=7088953044) has expired
[2026-04-13 09:41:12] 2026-04-13 08:40:14,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 09:41:12] 2026-04-13 08:40:14,947 | INFO     | will abort loop
[2026-04-13 09:41:12] 2026-04-13 08:40:14,967 | INFO     | all job control threads have been joined
[2026-04-13 09:41:12] 2026-04-13 08:40:15,084 | INFO     | all payload control threads have been joined
[2026-04-13 09:41:12] 2026-04-13 08:40:15,431 | INFO     | [job] retrieve thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,432 | INFO     | [job] queue monitor thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,445 | INFO     | [data] control thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,470 | INFO     | [job] validate thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,636 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,723 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,726 | INFO     | [data] copytool_in thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,949 | INFO     | [payload] validate_post thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,953 | INFO     | [job] job monitor thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:15,973 | INFO     | [job] control thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:16,090 | INFO     | [payload] control thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:16,609 | INFO     | [data] copytool_out thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:16,800 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:17,017 | INFO     | [payload] failed_post thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:17,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 09:41:12] 2026-04-13 08:40:21,867 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:25,125 | INFO     | job.realtimelogging is not enabled
[2026-04-13 09:41:12] 2026-04-13 08:40:26,131 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 09:41:12] 2026-04-13 08:40:45,369 | INFO     | PID=24098 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-13 09:41:12] 2026-04-13 08:40:45,370 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 09:41:12] 2026-04-13 08:40:45,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 09:41:12] 2026-04-13 08:40:45,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 09:41:12] 2026-04-13 08:41:07,100 | INFO     | [monitor] cgroup control has ended
[2026-04-13 09:41:12] 2026-04-13 08:41:07,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964562798400)>', '<ExcThread(monitor, started 139963857368832)>']
[2026-04-13 09:41:12] 2026-04-13 08:41:07,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 09:41:12] 2026-04-13 08:41:07,485 | INFO     | [monitor] control thread has ended
[2026-04-13 09:41:12] 2026-04-13 08:41:12,220 | INFO     | all workflow threads have been joined
[2026-04-13 09:41:12] 2026-04-13 08:41:12,221 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 09:41:12] 2026-04-13 08:41:12,221 | INFO     | traces error code: 0
[2026-04-13 09:41:12] 2026-04-13 08:41:12,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 09:41:12] 2026-04-13 08:41:12,300 [wrapper] ==== pilot stdout END ====
[2026-04-13 09:41:12] 2026-04-13 08:41:12,303 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 09:41:12] 2026-04-13 08:41:12,304 [wrapper] pilotpid: 24098
[2026-04-13 09:41:12] 2026-04-13 08:41:12,306 [wrapper] Pilot exit status: 0
[2026-04-13 09:41:12] 2026-04-13 08:41:12,314 [wrapper] pandaids: 7088953044
[2026-04-13 09:41:12] 2026-04-13 08:41:12,330 [wrapper] cleanup supervisor_pilot   34233 24099
[2026-04-13 09:41:12] 2026-04-13 08:41:12,332 [wrapper] Test setup, not cleaning
[2026-04-13 09:41:12] 2026-04-13 08:41:12,334 [wrapper] apfmon messages muted
[2026-04-13 09:41:12] 2026-04-13 08:41:12,336 [wrapper] ==== wrapper stdout END ====
[2026-04-13 09:41:12] 2026-04-13 08:41:12,338 [wrapper] ==== wrapper stderr END ====
[2026-04-13 09:41:12]  *** Error codes and diagnostics ***
[2026-04-13 09:41:12]     "exeErrorCode": 0,
[2026-04-13 09:41:12]     "pilotErrorCode": 0,
[2026-04-13 09:41:12]  *** Listing of results directory ***
[2026-04-13 09:41:12] total 419716
[2026-04-13 09:41:12] -rw-r--r-- 1 m m    644190 Apr 13 04:16 pilot3.tar.gz
[2026-04-13 09:41:12] -rw-r--r-- 1 m m      5094 Apr 13 04:38 queuedata.json
[2026-04-13 09:41:12] -rwx------ 1 m m     36322 Apr 13 04:38 runpilot2-wrapper.sh
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m       100 Apr 13 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 09:41:12] -rwxr-xr-x 1 m m      7986 Apr 13 06:50 run_atlas
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m       105 Apr 13 06:50 job.xml
[2026-04-13 09:41:12] -rw-r--r-- 2 m m     15665 Apr 13 06:50 start_atlas.sh
[2026-04-13 09:41:12] drwxrwx--x 2 m m      4096 Apr 13 06:50 shared
[2026-04-13 09:41:12] -rw-r--r-- 2 m m    656933 Apr 13 06:50 input.tar.gz
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m      5874 Apr 13 06:50 init_data.xml
[2026-04-13 09:41:12] -rw-r--r-- 2 m m 224280022 Apr 13 06:50 EVNT.49263206._000768.pool.root.1
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m         0 Apr 13 06:50 boinc_lockfile
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m      2575 Apr 13 06:51 pandaJob.out
[2026-04-13 09:41:12] -rw------- 1 m m    997767 Apr 13 06:51 agis_schedconf.cvmfs.json
[2026-04-13 09:41:12] -rw------- 1 m m   1511579 Apr 13 06:51 agis_ddmendpoints.agis.ALL.json
[2026-04-13 09:41:12] -rw------- 1 m m       414 Apr 13 06:51 workernode_map.json
[2026-04-13 09:41:12] drwx------ 5 m m      4096 Apr 13 06:51 pilot3
[2026-04-13 09:41:12] -rw------- 1 m m 199011730 Apr 13 09:39 HITS.49263208._039004.pool.root.1
[2026-04-13 09:41:12] -rw------- 1 m m      1015 Apr 13 09:40 memory_monitor_summary.json
[2026-04-13 09:41:12] -rw------- 1 m m    285392 Apr 13 09:40 log.49263208._039004.job.log.tgz.1
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m       488 Apr 13 09:40 boinc_task_state.xml
[2026-04-13 09:41:12] -rw------- 1 m m      6316 Apr 13 09:40 heartbeat_new.json
[2026-04-13 09:41:12] -rw------- 1 m m      6207 Apr 13 09:40 heartbeat.json
[2026-04-13 09:41:12] -rw------- 1 m m        95 Apr 13 09:40 pilot_heartbeat.json
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m        28 Apr 13 09:41 wrapper_checkpoint.txt
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m      8192 Apr 13 09:41 boinc_mmap_file
[2026-04-13 09:41:12] -rw------- 1 m m      5329 Apr 13 09:41 pilotlog.txt
[2026-04-13 09:41:12] -rw------- 1 m m    935591 Apr 13 09:41 log.49263208._039004.job.log.1
[2026-04-13 09:41:12] -rw------- 1 m m       357 Apr 13 09:41 output.list
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m       410 Apr 13 09:41 runtime_log
[2026-04-13 09:41:12] -rw------- 1 m m   1239040 Apr 13 09:41 result.tar.gz
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m      8351 Apr 13 09:41 runtime_log.err
[2026-04-13 09:41:12] -rw------- 1 m m       639 Apr 13 09:41 6541e17d91fd.diag
[2026-04-13 09:41:12] -rw-rw-r-- 1 m m     20664 Apr 13 09:41 stderr.txt
[2026-04-13 09:41:12] HITS file was successfully produced:
[2026-04-13 09:41:12] -rw------- 1 m m 199011730 Apr 13 09:39 shared/HITS.pool.root.1
[2026-04-13 09:41:12]  *** Contents of shared directory: ***
[2026-04-13 09:41:12] total 415248
[2026-04-13 09:41:12] -rw-r--r-- 2 m m     15665 Apr 13 06:50 start_atlas.sh
[2026-04-13 09:41:12] -rw-r--r-- 2 m m    656933 Apr 13 06:50 input.tar.gz
[2026-04-13 09:41:12] -rw-r--r-- 2 m m 224280022 Apr 13 06:50 ATLAS.root_0
[2026-04-13 09:41:12] -rw------- 1 m m 199011730 Apr 13 09:39 HITS.pool.root.1
[2026-04-13 09:41:12] -rw------- 1 m m   1239040 Apr 13 09:41 result.tar.gz
09:41:14 (19795): run_atlas exited; CPU time 39032.517399
09:41:14 (19795): called boinc_finish(0)

</stderr_txt>
]]>

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