Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:14 (3803): wrapper (7.7.26015): starting
23:38:14 (3803): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 23:38:14] Arguments: --nthreads 8
[2026-04-12 23:38:14] Threads: 8
[2026-04-12 23:38:14] Checking for CVMFS
[2026-04-12 23:38:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 23:38:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 23:38:14] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 23:38:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 23:38:14] 2.11.2.0 2933 144621 80100 158401 1 50 10879609 20275200 1 130560 0 40390404 99.892 7981593 21144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-12 23:38:14] CVMFS is ok
[2026-04-12 23:38:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 23:38:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 23:38:14] Further information can be found at the LHC@home message board.
[2026-04-12 23:38:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 23:38:14] Checking for apptainer binary...
[2026-04-12 23:38:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 23:38:14] Running /usr/bin/apptainer --version
[2026-04-12 23:38:14] apptainer version 1.3.2-1.el7
[2026-04-12 23:38:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 23:38:16] c-115-2.aglt2.org
[2026-04-12 23:38:16] apptainer works
[2026-04-12 23:38:16] Set ATHENA_PROC_NUMBER=8
[2026-04-12 23:38:16] Set ATHENA_CORE_NUMBER=8
[2026-04-12 23:38:16] Starting ATLAS job with PandaID=7088666209
[2026-04-12 23:38:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 01:35:59]  *** The last 200 lines of the pilot log: ***
[2026-04-13 01:35:59] 2026-04-13 05:35:11,140 | INFO     | preparing for final server update for job 7088666209 in state='finished'
[2026-04-13 01:35:59] 2026-04-13 05:35:11,143 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7088666209/jobReport.json
[2026-04-13 01:35:59] 2026-04-13 05:35:11,149 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-13 01:35:59] 2026-04-13 05:35:11,149 | INFO     | this job has now completed (state=finished)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,150 | INFO     | log transfer has been attempted: DONE
[2026-04-13 01:35:59] 2026-04-13 05:35:11,150 | INFO     | job 7088666209 has finished - writing final server update
[2026-04-13 01:35:59] 2026-04-13 05:35:11,151 | INFO     | total number of processed events: 400 (read)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,153 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7088666209/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,154 | INFO     | extracted standard info from prmon json
[2026-04-13 01:35:59] 2026-04-13 05:35:11,154 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 01:35:59] 2026-04-13 05:35:11,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 01:35:59] 2026-04-13 05:35:11,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 01:35:59] 2026-04-13 05:35:11,157 | INFO     | fitting pss+swap vs Time
[2026-04-13 01:35:59] 2026-04-13 05:35:11,158 | INFO     | sum of square deviations: 459366752.5
[2026-04-13 01:35:59] 2026-04-13 05:35:11,158 | INFO     | sum of deviations: 1627135807.5000002
[2026-04-13 01:35:59] 2026-04-13 05:35:11,158 | INFO     | mean x (centered): 0.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,159 | INFO     | mean y: 2530851.7280701753
[2026-04-13 01:35:59] 2026-04-13 05:35:11,159 | INFO     | intersect: 2530851.7280701753
[2026-04-13 01:35:59] 2026-04-13 05:35:11,159 | INFO     | chi2: 1.6527435896877227
[2026-04-13 01:35:59] 2026-04-13 05:35:11,159 | INFO     | sum of square deviations: 401533110.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,160 | INFO     | sum of deviations: 1797009491.9999986
[2026-04-13 01:35:59] 2026-04-13 05:35:11,160 | INFO     | mean x (centered): 0.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,160 | INFO     | mean y: 2531299.972477064
[2026-04-13 01:35:59] 2026-04-13 05:35:11,160 | INFO     | intersect: 2531299.972477064
[2026-04-13 01:35:59] 2026-04-13 05:35:11,160 | INFO     | chi2: 1.6547463756529495
[2026-04-13 01:35:59] 2026-04-13 05:35:11,160 | INFO     | current chi2=1.6547463756529495 (change=-0.1211794725886763 %)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,161 | INFO     | right removable region: 108
[2026-04-13 01:35:59] 2026-04-13 05:35:11,161 | INFO     | sum of square deviations: 401533110.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,161 | INFO     | sum of deviations: -15758188316.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,161 | INFO     | mean x (centered): 0.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,162 | INFO     | mean y: 2575763.853211009
[2026-04-13 01:35:59] 2026-04-13 05:35:11,162 | INFO     | intersect: 2575763.853211009
[2026-04-13 01:35:59] 2026-04-13 05:35:11,162 | INFO     | chi2: 0.12360083454353887
[2026-04-13 01:35:59] 2026-04-13 05:35:11,162 | INFO     | current chi2=0.12360083454353887 (change=92.52147548387148 %)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,162 | INFO     | sum of square deviations: 348769330.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | sum of deviations: -14217527664.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | mean x (centered): 0.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | mean y: 2571185.5384615385
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | intersect: 2571185.5384615385
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | chi2: 0.11209656017814962
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | current chi2=0.11209656017814962 (change=9.307602499509686 %)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,163 | INFO     | left removable region: 10
[2026-04-13 01:35:59] 2026-04-13 05:35:11,164 | INFO     | sum of square deviations: 291817564.5
[2026-04-13 01:35:59] 2026-04-13 05:35:11,164 | INFO     | sum of deviations: -13263806084.000002
[2026-04-13 01:35:59] 2026-04-13 05:35:11,164 | INFO     | mean x (centered): 0.0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,164 | INFO     | mean y: 2574253.6326530613
[2026-04-13 01:35:59] 2026-04-13 05:35:11,165 | INFO     | intersect: 2574253.6326530613
[2026-04-13 01:35:59] 2026-04-13 05:35:11,165 | INFO     | chi2: 0.10634044611700966
[2026-04-13 01:35:59] 2026-04-13 05:35:11,165 | INFO     | current memory leak: -45.45 B/s (using 98 data points, chi2=0.11)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,165 | INFO     | could have reported an average CPU frequency of 1712 MHz (7 samples)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | ..............................
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . Timing measurements:
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . get job = 0 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . initial setup = 8 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . payload setup = 16 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . stage-in = 0 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . payload execution = 6956 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . stage-out = 0 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,166 | INFO     | . log creation = 0 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,167 | INFO     | ..............................
[2026-04-13 01:35:59] 2026-04-13 05:35:11,359 | INFO     | 
[2026-04-13 01:35:59] 2026-04-13 05:35:11,360 | INFO     | job summary report
[2026-04-13 01:35:59] 2026-04-13 05:35:11,360 | INFO     | --------------------------------------------------
[2026-04-13 01:35:59] 2026-04-13 05:35:11,360 | INFO     | PanDA job id: 7088666209
[2026-04-13 01:35:59] 2026-04-13 05:35:11,360 | INFO     | task id: 49263191
[2026-04-13 01:35:59] 2026-04-13 05:35:11,360 | INFO     | errors: (none)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,361 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 01:35:59] 2026-04-13 05:35:11,361 | INFO     | pilot state: finished 
[2026-04-13 01:35:59] 2026-04-13 05:35:11,361 | INFO     | transexitcode: 0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,361 | INFO     | exeerrorcode: 0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,361 | INFO     | exeerrordiag: 
[2026-04-13 01:35:59] 2026-04-13 05:35:11,361 | INFO     | exitcode: 0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,362 | INFO     | exitmsg: OK
[2026-04-13 01:35:59] 2026-04-13 05:35:11,362 | INFO     | cpuconsumptiontime: 51475 s
[2026-04-13 01:35:59] 2026-04-13 05:35:11,362 | INFO     | nevents: 400
[2026-04-13 01:35:59] 2026-04-13 05:35:11,362 | INFO     | neventsw: 0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,362 | INFO     | pid: 12078
[2026-04-13 01:35:59] 2026-04-13 05:35:11,363 | INFO     | pgrp: 12078
[2026-04-13 01:35:59] 2026-04-13 05:35:11,363 | INFO     | corecount: 8
[2026-04-13 01:35:59] 2026-04-13 05:35:11,363 | INFO     | event service: False
[2026-04-13 01:35:59] 2026-04-13 05:35:11,363 | INFO     | sizes: {0: 2279064, 1: 2281550, 12: 2281550, 6976: 2308824, 6977: 2317878, 6978: 2318016}
[2026-04-13 01:35:59] 2026-04-13 05:35:11,363 | INFO     | --------------------------------------------------
[2026-04-13 01:35:59] 2026-04-13 05:35:11,363 | INFO     | 
[2026-04-13 01:35:59] 2026-04-13 05:35:11,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 01:35:59] 2026-04-13 05:35:11,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,396 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,396 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,396 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,399 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,399 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 01:35:59] 2026-04-13 05:35:11,400 | INFO     | job 7088666209 has completed (purged errors)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,400 | INFO     | overall cleanup function is called
[2026-04-13 01:35:59] 2026-04-13 05:35:11,499 | WARNING  | process 12078 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 01:35:59] 2026-04-13 05:35:11,570 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 01:35:59] 2026-04-13 05:35:11,654 | INFO     | number of running child processes to parent process 12078: 1
[2026-04-13 01:35:59] 2026-04-13 05:35:11,655 | INFO     | maximum number of monitored processes: 6
[2026-04-13 01:35:59] 2026-04-13 05:35:11,655 | INFO     | aborting job monitoring since job object (job id=7088666209) has expired
[2026-04-13 01:35:59] 2026-04-13 05:35:12,408 | INFO     | --- collectZombieJob: --- 10, [12078]
[2026-04-13 01:35:59] 2026-04-13 05:35:12,409 | INFO     | zombie collector waiting for pid 12078
[2026-04-13 01:35:59] 2026-04-13 05:35:12,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 01:35:59] 2026-04-13 05:35:12,410 | INFO     | collected zombie processes
[2026-04-13 01:35:59] 2026-04-13 05:35:12,410 | INFO     | will attempt to kill all subprocesses of pid=12078
[2026-04-13 01:35:59] 2026-04-13 05:35:12,498 | INFO     | process IDs to be killed: [12078] (in reverse order)
[2026-04-13 01:35:59] 2026-04-13 05:35:12,558 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 01:35:59] 2026-04-13 05:35:12,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 01:35:59] 2026-04-13 05:35:12,562 | INFO     | did not find any defunct processes belonging to 12078
[2026-04-13 01:35:59] 2026-04-13 05:35:12,565 | INFO     | did not find any defunct processes belonging to 12078
[2026-04-13 01:35:59] 2026-04-13 05:35:12,566 | INFO     | Ready for new job
[2026-04-13 01:35:59] 2026-04-13 05:35:12,568 | INFO     | **************************************
[2026-04-13 01:35:59] 2026-04-13 05:35:12,569 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 01:35:59] 2026-04-13 05:35:12,569 | INFO     | **************************************
[2026-04-13 01:35:59] 2026-04-13 05:35:12,569 | INFO     | 
[2026-04-13 01:35:59] 2026-04-13 05:35:12,569 | INFO     | architecture information:
[2026-04-13 01:35:59] 2026-04-13 05:35:12,570 | INFO     | executing command: cat /etc/os-release
[2026-04-13 01:35:59] 2026-04-13 05:35:12,589 | INFO     | cat /etc/os-release:
[2026-04-13 01:35:59] NAME="CentOS Linux"
[2026-04-13 01:35:59] VERSION="7 (Core)"
[2026-04-13 01:35:59] ID="centos"
[2026-04-13 01:35:59] ID_LIKE="rhel fedora"
[2026-04-13 01:35:59] VERSION_ID="7"
[2026-04-13 01:35:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 01:35:59] ANSI_COLOR="0;31"
[2026-04-13 01:35:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 01:35:59] HOME_URL="https://www.centos.org/"
[2026-04-13 01:35:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 01:35:59] 
[2026-04-13 01:35:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 01:35:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 01:35:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 01:35:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 01:35:59] 
[2026-04-13 01:35:59] 2026-04-13 05:35:12,590 | INFO     | **************************************
[2026-04-13 01:35:59] 2026-04-13 05:35:13,093 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 01:35:59] 2026-04-13 05:35:13,115 | INFO     | sufficient remaining disk space (18538823680 B)
[2026-04-13 01:35:59] 2026-04-13 05:35:13,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 01:35:59] 2026-04-13 05:35:13,116 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 01:35:59] 2026-04-13 05:35:13,116 | INFO     | update_server=False
[2026-04-13 01:35:59] 2026-04-13 05:35:13,117 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 01:35:59] 2026-04-13 05:35:13,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 01:35:59] 2026-04-13 05:35:13,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 01:35:59] 2026-04-13 05:35:13,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 01:35:59] 2026-04-13 05:35:13,118 | INFO     | aborting loop
[2026-04-13 01:35:59] 2026-04-13 05:35:13,390 | INFO     | all job control threads have been joined
[2026-04-13 01:35:59] 2026-04-13 05:35:13,472 | INFO     | all data control threads have been joined
[2026-04-13 01:35:59] 2026-04-13 05:35:13,505 | INFO     | job.realtimelogging is not enabled
[2026-04-13 01:35:59] 2026-04-13 05:35:14,122 | INFO     | [job] queue monitor thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,123 | INFO     | [job] retrieve thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,124 | INFO     | [job] job monitor thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,299 | INFO     | all payload control threads have been joined
[2026-04-13 01:35:59] 2026-04-13 05:35:14,356 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,357 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,396 | INFO     | [job] control thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,477 | INFO     | [data] control thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,486 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,511 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,719 | INFO     | [payload] validate_post thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:14,896 | INFO     | [data] copytool_in thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:15,123 | INFO     | [data] copytool_out thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:15,182 | INFO     | [payload] failed_post thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:15,304 | INFO     | [payload] control thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:15,344 | INFO     | [job] validate thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:15,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 01:35:59] 2026-04-13 05:35:19,944 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 01:35:59] 2026-04-13 05:35:43,255 | INFO     | PID=7504 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-13 01:35:59] 2026-04-13 05:35:43,255 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 01:35:59] 2026-04-13 05:35:43,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 01:35:59] 2026-04-13 05:35:43,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 01:35:59] 2026-04-13 05:35:51,980 | INFO     | [monitor] cgroup control has ended
[2026-04-13 01:35:59] 2026-04-13 05:35:54,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646448310080)>', '<ExcThread(monitor, started 140645708572416)>']
[2026-04-13 01:35:59] 2026-04-13 05:35:54,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 01:35:59] 2026-04-13 05:35:54,311 | INFO     | [monitor] control thread has ended
[2026-04-13 01:35:59] 2026-04-13 05:35:59,072 | INFO     | all workflow threads have been joined
[2026-04-13 01:35:59] 2026-04-13 05:35:59,072 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 01:35:59] 2026-04-13 05:35:59,073 | INFO     | traces error code: 0
[2026-04-13 01:35:59] 2026-04-13 05:35:59,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 01:35:59] 2026-04-13 05:35:59,192 [wrapper] ==== pilot stdout END ====
[2026-04-13 01:35:59] 2026-04-13 05:35:59,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 01:35:59] 2026-04-13 05:35:59,201 [wrapper] pilotpid: 7504
[2026-04-13 01:35:59] 2026-04-13 05:35:59,205 [wrapper] Pilot exit status: 0
[2026-04-13 01:35:59] 2026-04-13 05:35:59,223 [wrapper] pandaids: 7088666209
[2026-04-13 01:35:59] 2026-04-13 05:35:59,267 [wrapper] cleanup supervisor_pilot 19525 7505
[2026-04-13 01:35:59] 2026-04-13 05:35:59,272 [wrapper] Test setup, not cleaning
[2026-04-13 01:35:59] 2026-04-13 05:35:59,277 [wrapper] apfmon messages muted
[2026-04-13 01:35:59] 2026-04-13 05:35:59,282 [wrapper] ==== wrapper stdout END ====
[2026-04-13 01:35:59] 2026-04-13 05:35:59,286 [wrapper] ==== wrapper stderr END ====
[2026-04-13 01:35:59]  *** Error codes and diagnostics ***
[2026-04-13 01:35:59]     "exeErrorCode": 0,
[2026-04-13 01:35:59]     "pilotErrorCode": 0,
[2026-04-13 01:35:59]  *** Listing of results directory ***
[2026-04-13 01:35:59] total 414620
[2026-04-13 01:35:59] -rwx------ 1 boincer umatlas     36322 Apr 12 20:45 runpilot2-wrapper.sh
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas      5094 Apr 12 20:45 queuedata.json
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas    644190 Apr 12 20:45 pilot3.tar.gz
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas       100 Apr 12 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 01:35:59] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 23:38 run_atlas
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas       105 Apr 12 23:38 job.xml
[2026-04-13 01:35:59] -rw-r--r-- 2 boincer umatlas 223844657 Apr 12 23:38 EVNT.49263189._001666.pool.root.1
[2026-04-13 01:35:59] -rw-r--r-- 2 boincer umatlas     15665 Apr 12 23:38 start_atlas.sh
[2026-04-13 01:35:59] drwxrwx--x 2 boincer umatlas      4096 Apr 12 23:38 shared
[2026-04-13 01:35:59] -rw-r--r-- 2 boincer umatlas    656922 Apr 12 23:38 input.tar.gz
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas         0 Apr 12 23:38 boinc_lockfile
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas      2578 Apr 12 23:38 pandaJob.out
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas        57 Apr 12 23:38 setup.sh.local
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas    997767 Apr 12 23:38 agis_schedconf.cvmfs.json
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas   1511579 Apr 12 23:38 agis_ddmendpoints.agis.ALL.json
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas       430 Apr 12 23:38 workernode_map.json
[2026-04-13 01:35:59] drwx------ 5 boincer umatlas      4096 Apr 12 23:38 pilot3
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas      5824 Apr 13 01:31 init_data.xml
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas 194715277 Apr 13 01:34 HITS.49263191._062724.pool.root.1
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas       487 Apr 13 01:34 boinc_task_state.xml
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas        95 Apr 13 01:35 pilot_heartbeat.json
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas      1048 Apr 13 01:35 memory_monitor_summary.json
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas    320349 Apr 13 01:35 log.49263191._062724.job.log.tgz.1
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas      6419 Apr 13 01:35 heartbeat_new.json
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas      6310 Apr 13 01:35 heartbeat.json
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 01:35 boinc_mmap_file
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas        27 Apr 13 01:35 wrapper_checkpoint.txt
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas      4812 Apr 13 01:35 pilotlog.txt
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas    652616 Apr 13 01:35 log.49263191._062724.job.log.1
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas       357 Apr 13 01:35 output.list
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas       410 Apr 13 01:35 runtime_log
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas    993280 Apr 13 01:35 result.tar.gz
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas      8958 Apr 13 01:35 runtime_log.err
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas       658 Apr 13 01:35 3c9651167eb6.diag
[2026-04-13 01:35:59] -rw-r--r-- 1 boincer umatlas     21191 Apr 13 01:35 stderr.txt
[2026-04-13 01:35:59] HITS file was successfully produced:
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas 194715277 Apr 13 01:34 shared/HITS.pool.root.1
[2026-04-13 01:35:59]  *** Contents of shared directory: ***
[2026-04-13 01:35:59] total 410388
[2026-04-13 01:35:59] -rw-r--r-- 2 boincer umatlas 223844657 Apr 12 23:38 ATLAS.root_0
[2026-04-13 01:35:59] -rw-r--r-- 2 boincer umatlas     15665 Apr 12 23:38 start_atlas.sh
[2026-04-13 01:35:59] -rw-r--r-- 2 boincer umatlas    656922 Apr 12 23:38 input.tar.gz
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas 194715277 Apr 13 01:34 HITS.pool.root.1
[2026-04-13 01:35:59] -rw------- 1 boincer umatlas    993280 Apr 13 01:35 result.tar.gz
01:36:00 (3803): run_atlas exited; CPU time 51433.187588
01:36:00 (3803): called boinc_finish(0)

</stderr_txt>
]]>

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