Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-13 15:37:30 (1936): vboxwrapper version 26210
2026-04-13 15:37:30 (1936): BOINC client version: 8.2.8
2026-04-13 15:37:31 (1936): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-04-13 15:37:31 (1936): Successfully copied 'init_data.xml' to the shared directory.
2026-04-13 15:37:31 (1936): Create VM. (boinc_866bf734878202e6, slot#0)
2026-04-13 15:37:32 (1936): Setting Memory Size for VM. (4000MB)
2026-04-13 15:37:32 (1936): Setting CPU Count for VM. (4)
2026-04-13 15:37:32 (1936): Setting Chipset Options for VM.
2026-04-13 15:37:32 (1936): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-13 15:37:33 (1936): Setting Boot Options for VM.
2026-04-13 15:37:33 (1936): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-13 15:37:34 (1936): Enabling VM Network Access.
2026-04-13 15:37:34 (1936): Disabling USB Support for VM.
2026-04-13 15:37:34 (1936): Disabling COM Port Support for VM.
2026-04-13 15:37:34 (1936): Disabling LPT Port Support for VM.
2026-04-13 15:37:35 (1936): Disabling Audio Support for VM.
2026-04-13 15:37:35 (1936): Disabling Clipboard Support for VM.
2026-04-13 15:37:35 (1936): Disabling Drag and Drop Support for VM.
2026-04-13 15:37:35 (1936): Adding storage controller(s) to VM.
2026-04-13 15:37:36 (1936): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-13 15:37:36 (1936): Adding VirtualBox Guest Additions to VM.
2026-04-13 15:37:36 (1936): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-13 15:37:37 (1936): forwarding host port 65164 to guest port 80
2026-04-13 15:37:37 (1936): Enabling remote desktop for VM.
2026-04-13 15:37:38 (1936): Enabling shared directory for VM.
2026-04-13 15:37:38 (1936): Starting VM using VBoxManage interface. (boinc_866bf734878202e6, slot#0)
2026-04-13 15:37:45 (1936): Successfully started VM. (PID = '13924')
2026-04-13 15:37:45 (1936): Reporting VM Process ID to BOINC.
2026-04-13 15:37:45 (1936): Guest Log: BIOS: VirtualBox 7.2.2
2026-04-13 15:37:45 (1936): Guest Log: CPUID EDX: 0x178bfbff
2026-04-13 15:37:45 (1936): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-13 15:37:45 (1936): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-13 15:37:45 (1936): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-13 15:37:45 (1936): Detected: Web Application Enabled (http://localhost:65164)
2026-04-13 15:37:45 (1936): Detected: Remote Desktop Enabled (localhost:65165)
2026-04-13 15:37:45 (1936): Preference change detected
2026-04-13 15:37:45 (1936): Setting CPU throttle for VM. (100%)
2026-04-13 15:37:45 (1936): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-13 15:37:47 (1936): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-13 15:37:47 (1936): Guest Log: BIOS: Booting from Hard Disk...
2026-04-13 15:37:50 (1936): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-13 15:37:50 (1936): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-13 15:37:50 (1936): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-13 15:37:55 (1936): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-13 15:37:55 (1936): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-13 15:38:02 (1936): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000172 main     Log opened 2026-04-13T15:38:00.907596000Z
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000295 main     OS Product: Linux
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000375 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000410 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000411 main     Process ID: 1296
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.000411 main     Package type: LINUX_64BITS_GENERIC
2026-04-13 15:38:02 (1936): Guest Log: 00:00:00.001391 main     5.2.32 r132073 started. Verbose level = 0
2026-04-13 15:38:02 (1936): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-13 15:38:02 (1936): Guest Log: [INFO] Mounting shared directory
2026-04-13 15:38:02 (1936): Guest Log: [INFO] Checking for init_data.xml
2026-04-13 15:38:06 (1936): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-13 15:38:06 (1936): Guest Log: [INFO] Detected branch: prod
2026-04-13 15:38:06 (1936): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-13 15:38:06 (1936): Guest Log: Copying input files
2026-04-13 15:38:07 (1936): Guest Log: Copied input files into RunAtlas.
2026-04-13 15:38:07 (1936): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-13 15:38:07 (1936): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-13 15:38:07 (1936): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-13 15:38:07 (1936): Guest Log: Further information can be found at the LHC@home message board.
2026-04-13 15:38:12 (1936): Guest Log: 00:00:10.007680 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 996 531 000ns (GuestNow=1 776 087 491 916 762 000 ns GuestLast=1 776 094 680 913 293 000 ns fSetTimeLastLoop=true )
2026-04-13 15:38:17 (1936): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-13 15:38:17 (1936): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-13 15:38:17 (1936): Guest Log: 2.6.3.0 1588 0 30184 158417 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-13 15:38:17 (1936): Guest Log: copied the webapp to /var/www
2026-04-13 15:38:17 (1936): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-13 15:38:17 (1936): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-13 15:38:18 (1936): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-13 15:38:18 (1936): Guest Log:  *** Starting ATLAS job. (PandaID=7088693092 taskID=49263191) ***
2026-04-13 17:17:50 (1936): Status Report: Elapsed Time: '6000.000000'
2026-04-13 17:17:50 (1936): Status Report: CPU Time: '22427.359375'
2026-04-13 18:57:53 (1936): Status Report: Elapsed Time: '12000.000000'
2026-04-13 18:57:53 (1936): Status Report: CPU Time: '46290.437500'
2026-04-13 19:51:37 (1936): Guest Log:  *** Job finished ***
2026-04-13 19:51:37 (1936): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:11,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:11,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:20,156 | INFO     | [monitor] cgroup control has ended
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:22,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674644145984)>', '<ExcThread(monitor, started 139673905112832)>']
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:22,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:22,800 | INFO     | [monitor] control thread has ended
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,317 | INFO     | all workflow threads have been joined
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,317 | INFO     | end of generic workflow (traces error code: 0)
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,318 | INFO     | traces error code: 0
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,481 [wrapper] ==== pilot stdout END ====
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,487 [wrapper] ==== wrapper stdout RESUME ====
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,492 [wrapper] pilotpid: 5978
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,497 [wrapper] Pilot exit status: 0
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,570 [wrapper] pandaids: 7088693092
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,608 [wrapper] cleanup supervisor_pilot 28102 5979
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,620 [wrapper] Test setup, not cleaning
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,627 [wrapper] apfmon messages muted
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,634 [wrapper] ==== wrapper stdout END ====
2026-04-13 19:51:37 (1936): Guest Log: 2026-04-13 17:51:27,640 [wrapper] ==== wrapper stderr END ====
2026-04-13 19:51:37 (1936): Guest Log:  *** Error codes and diagnostics ***
2026-04-13 19:51:37 (1936): Guest Log:     "exeErrorCode": 0,
2026-04-13 19:51:37 (1936): Guest Log:     "pilotErrorCode": 0,
2026-04-13 19:51:37 (1936): Guest Log:  *** Listing of results directory ***
2026-04-13 19:51:37 (1936): Guest Log: total 195684
2026-04-13 19:51:37 (1936): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 13 00:45 pilot3.tar.gz
2026-04-13 19:51:37 (1936): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 13 00:48 runpilot2-wrapper.sh
2026-04-13 19:51:37 (1936): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 13 00:53 queuedata.json
2026-04-13 19:51:37 (1936): Guest Log: -rwxr-xr-x. 1 atlas atlas     10289 Apr 13 13:38 init_data.xml
2026-04-13 19:51:37 (1936): Guest Log: -rwxr-xr-x. 1 atlas atlas    656930 Apr 13 13:38 input.tar.gz
2026-04-13 19:51:37 (1936): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 13 13:38 start_atlas.sh
2026-04-13 19:51:37 (1936): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 13:38 EVNT.49263189._001694.pool.root.1 -> /data/./ATLAS.root_0
2026-04-13 19:51:37 (1936): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 13 13:38 pandaJob.out
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas    997737 Apr 13 13:38 agis_schedconf.cvmfs.json
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas       422 Apr 13 13:38 workernode_map.json
2026-04-13 19:51:37 (1936): Guest Log: drwx------. 5 atlas atlas      4096 Apr 13 13:39 pilot3
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas 192960823 Apr 13 17:50 HITS.49263191._063455.pool.root.1
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 13 17:50 memory_monitor_summary.json
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 17:50 pilot_heartbeat.json
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 13 17:50 agis_ddmendpoints.agis.ALL.json
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas    346346 Apr 13 17:50 log.49263191._063455.job.log.tgz.1
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas      6386 Apr 13 17:50 heartbeat_new.json
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas      6277 Apr 13 17:50 heartbeat.json
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas      4872 Apr 13 17:51 pilotlog.txt
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas   1368229 Apr 13 17:51 log.49263191._063455.job.log.1
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 17:51 output.list
2026-04-13 19:51:37 (1936): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 13 17:51 runtime_log
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas   1730560 Apr 13 17:51 result.tar.gz
2026-04-13 19:51:37 (1936): Guest Log: -rw-r--r--. 1 atlas atlas      8347 Apr 13 17:51 runtime_log.err
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas       649 Apr 13 17:51 3d4e093246e7.diag
2026-04-13 19:51:37 (1936): Guest Log: Looking for outputfile HITS.49263191._063455.pool.root.1
2026-04-13 19:51:37 (1936): Guest Log: HITS file was successfully produced
2026-04-13 19:51:37 (1936): Guest Log: -rw-------. 1 atlas atlas 192960823 Apr 13 17:50 /home/atlas/RunAtlas/HITS.49263191._063455.pool.root.1
2026-04-13 19:51:38 (1936): Guest Log: Successfully finished the ATLAS job!
2026-04-13 19:51:38 (1936): Guest Log: Copying the results back to the shared directory!
2026-04-13 19:51:38 (1936): Guest Log:  *** Contents of shared directory: ***
2026-04-13 19:51:38 (1936): Guest Log: total 410696
2026-04-13 19:51:38 (1936): Guest Log: -rwxrwxrwx. 1 root root 225166206 Apr 13 13:37 ATLAS.root_0
2026-04-13 19:51:38 (1936): Guest Log: -rwxrwxrwx. 1 root root 192960823 Apr 13  2026 HITS.pool.root.1
2026-04-13 19:51:38 (1936): Guest Log: -rwxrwxrwx. 1 root root     10289 Apr 13 13:37 init_data.xml
2026-04-13 19:51:38 (1936): Guest Log: -rwxrwxrwx. 1 root root    656930 Apr 13 03:00 input.tar.gz
2026-04-13 19:51:38 (1936): Guest Log: -rwxrwxrwx. 1 root root   1730560 Apr 13  2026 result.tar.gz
2026-04-13 19:51:38 (1936): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 13 03:00 start_atlas.sh
2026-04-13 19:51:38 (1936): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-13 19:51:38 (1936): VM Completion File Detected.
2026-04-13 19:51:38 (1936): Powering off VM.
2026-04-13 19:51:39 (1936): Successfully stopped VM.
2026-04-13 19:51:39 (1936): Deregistering VM. (boinc_866bf734878202e6, slot#0)
2026-04-13 19:51:39 (1936): Removing network bandwidth throttle group from VM.
2026-04-13 19:51:39 (1936): Removing VM from VirtualBox.
2026-04-13 19:51:44 (1936): called boinc_finish(0)

</stderr_txt>
]]>

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